tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001807)

Anticodon = GGC

HIT: 7 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.460695 (7 seq.)
>w027456 ABCE01000039 Planctomycetota Gimesia maris DSM 8797 [ABCE] 33494 33571 + Ala GGC [ENA]
>WENV183627719 OOGL01031850 [OOGL] marine metagenome; sea ice 427 354 - Ala GGC [ENA]
>WENV170014953 AZIC01005183 [AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy) 12351 12424 + Ala GGC [ENA]
>WENV170121091 CENL01049047 [CENL] marine metagenome genome assembly TARA_025_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 10611 10538 - Ala GGC [ENA]
>WENV170621939 FUWD013080192 [FUWD] metagenome; unknown 1048 1121 + Ala GGC [ENA]
>WENV170630135 FUWD013295548 [FUWD] metagenome; unknown 1048 1121 + Ala GGC [ENA]
>SRA1027524 SRR035086.141159 454 Sequencing (SRP001807) 416 489 + Ala GGC [SRA]
Identical group No.466606 (3 seq.)
>WENV180116099 OAPT01128354 [OAPT] marine metagenome; seawater 33 108 + Ala GGC [ENA]
>WENV170350043 CETH01058688 [CETH] marine metagenome genome assembly TARA_122_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 346 421 + Ala GGC [ENA]
>SRA1027695 SRR035086.175925 454 Sequencing (SRP001807) 206 281 + Ala GGC [SRA]
Identical group No.474450 (22 seq.)
>WENV180382260 OBOS01178960 [OBOS] marine metagenome; ENVO 00002150 100 175 + Ala GGC [ENA]
>WENV180393401 OBPQ01031483 [OBPQ] marine metagenome; polypropylene bottle 46 121 + Ala GGC [ENA]
>WENV181325627 OFLJ01009676 [OFLJ] seawater metagenome; seawater 650 575 - Ala GGC [ENA]
>WENV181392372 OFRW01037098 [OFRW] seawater metagenome; seawater 151 226 + Ala GGC [ENA]
>WENV182543091 OJBA01000018 [OJBA] seawater metagenome; Sea water 7258 7183 - Ala GGC [ENA]
>WENV182550333 OJCA01000263 [OJCA] seawater metagenome; Sea water 3006 3081 + Ala GGC [ENA]
>WENV182563420 OJEC01000097 [OJEC] seawater metagenome; Sea water 3807 3882 + Ala GGC [ENA]
>WENV182570240 OJFC01000318 [OJFC] seawater metagenome; Sea water 2903 2978 + Ala GGC [ENA]
>WENV182571466 OJFK01000040 [OJFK] seawater metagenome; Sea water 32090 32015 - Ala GGC [ENA]
>WENV182583815 OJHF01000023 [OJHF] seawater metagenome; Sea water 20393 20468 + Ala GGC [ENA]
>WENV183055796 OLHH01000385 [OLHH] seawater metagenome; Sea water 711 636 - Ala GGC [ENA]
>WENV183058468 OLHR01000173 [OLHR] seawater metagenome; Sea water 7630 7555 - Ala GGC [ENA]
>WENV183619485 OOFQ01009701 [OOFQ] marine metagenome; seawater 650 575 - Ala GGC [ENA]
>WENV183625278 OOGF01008832 [OOGF] marine metagenome; seawater 708 633 - Ala GGC [ENA]
>WENV183626730 OOGJ01021586 [OOGJ] marine metagenome; seawater 337 262 - Ala GGC [ENA]
>WENV183627102 OOGK01038680 [OOGK] marine metagenome; seawater 151 226 + Ala GGC [ENA]
>WENV170536052 CEWP01142739 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 648 573 - Ala GGC [ENA]
>WENV170567739 FLMP01004628 [FLMP] seawater metagenome; seawater 3320 3395 + Ala GGC [ENA]
>WENV170875323 MDTC01019597 [MDTC] marine metagenome; seawater 7739 7664 - Ala GGC [ENA]
>WENV170941786 MDTG01366397 [MDTG] marine metagenome; seawater 3069 2994 - Ala GGC [ENA]
>WENV170952594 MEHZ011605653 [MEHZ] marine metagenome; marine surface water 5366 5291 - Ala GGC [ENA]
>SRA1027851 SRR035086.206696 454 Sequencing (SRP001807) 288 215 - Ala GGC [SRA]
Identical group No.484737 (5 seq.)
>WENV170620214 FUWD013027454 [FUWD] metagenome; unknown 3905 3980 + Ala GGC [ENA]
>WENV170628350 FUWD013245232 [FUWD] metagenome; unknown 3905 3980 + Ala GGC [ENA]
>SRA1027377 SRR035086.114744 454 Sequencing (SRP001807) 263 188 - Ala GGC [SRA]
>SRA1028616 SRR035086.376549 454 Sequencing (SRP001807) 213 138 - Ala GGC [SRA]
>SRA1047152 SRR035093.470955 454 Sequencing (SRP001814) 316 391 + Ala GGC [SRA]
Identical group No.548328 (10 seq.)
>WENV170557364 CXWL01025223 [CXWL] groundwater metagenome; biofilm material 635 562 - Ala GGC [ENA]
>WENV170611922 FUWD012446918 [FUWD] metagenome; unknown 176 249 + Ala GGC [ENA]
>WENV170956446 MJUP01008317 [MJUP] soil metagenome; viral particles from soil sample MGM 165 90 - Ala GGC [ENA]
>WENV170979459 MTKZ01091081 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 1771 1698 - Ala GGC [ENA]
>SRA1026904 SRR035086.24817 454 Sequencing (SRP001807) 186 259 + Ala GGC [SRA]
>SRA1027143 SRR035086.70859 454 Sequencing (SRP001807) 186 259 + Ala GGC [SRA]
>SRA1027280 SRR035086.95649 454 Sequencing (SRP001807) 186 259 + Ala GGC [SRA]
>SRA1027295 SRR035086.99601 454 Sequencing (SRP001807) 186 259 + Ala GGC [SRA]
>SRA1027485 SRR035086.132672 454 Sequencing (SRP001807) 186 259 + Ala GGC [SRA]
>C10110477 CP001848 Planctomycetota Pirellula staleyi DSM 6068 [CP001848] 919352 919279 - Ala GGC [Ensembl]
Identical group No.593630 (2 seq.)
>SRA1027573 SRR035086.150332 454 Sequencing (SRP001807) 374 449 + Ala GGC [SRA]
>SRA1027926 SRR035086.219660 454 Sequencing (SRP001807) 374 449 + Ala GGC [SRA]
Identical group No.593672 (1 seq.)
>SRA1028646 SRR035086.384559 454 Sequencing (SRP001807) 299 226 - Ala GGC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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