tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001807)

Anticodon = GGG

HIT: 6 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.242412 (2 seq.)
>WENV180085473 MPMD02331332 [MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter 971 896 - Pro GGG [ENA]
>SRA1028760 SRR035086.426962 454 Sequencing (SRP001807) 25 102 + Pro GGG [SRA]
Identical group No.261010 (1 seq.)
>SRA1027911 SRR035086.217132 454 Sequencing (SRP001807) 262 187 - Pro GGG [SRA]
Identical group No.261015 (1 seq.)
>SRA1028455 SRR035086.329862 454 Sequencing (SRP001807) 197 274 + Pro GGG [SRA]
Identical group No.279260 (3 seq.)
>w027433 ABCE01000012 Planctomycetota Gimesia maris DSM 8797 [ABCE] 169949 170027 + Pro GGG [ENA]
>WENV170121090 CENL01049047 [CENL] marine metagenome genome assembly TARA_025_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 54661 54587 - Pro GGG [ENA]
>SRA1027178 SRR035086.75417 454 Sequencing (SRP001807) 123 197 + Pro GGG [SRA]
Identical group No.304362 (71 seq.)
>W1711174380 LWEE01000001 Gammaproteobacteria Halioglobus sp. HI00S01 [LWEE] 39741 39665 - Pro GGG [ENA]
>W1711179228 LWHM01000033 Gammaproteobacteria Pseudohongiella nitratireducens SCS-49 [LWHM] 246004 245928 - Pro GGG [ENA]
>W1711179259 LWHN01000032 Gammaproteobacteria Pseudohongiella nitratireducens SCS-111 [LWHN] 246004 245928 - Pro GGG [ENA]
>WENV180358969 OBNQ01077685 [OBNQ] marine metagenome; ENVO 00002150 375 299 - Pro GGG [ENA]
>WENV180367470 OBOE01101023 [OBOE] marine metagenome; ENVO:00002010 335 259 - Pro GGG [ENA]
>WENV180370486 OBOH01110062 [OBOH] marine metagenome; ENVO:00002010 43 119 + Pro GGG [ENA]
>WENV180589310 OCOR01028741 [OCOR] marine metagenome; ENVO:00002042 153 77 - Pro GGG [ENA]
>WENV181314814 OFJL01003767 [OFJL] marine metagenome; seawater 897 973 + Pro GGG [ENA]
>WENV181325639 OFLJ01010344 [OFLJ] seawater metagenome; seawater 436 360 - Pro GGG [ENA]
>W141169449 AXVV01000004 Gammaproteobacteria Gammaproteobacteria bacterium SCGC AAA003-E02 [AXVV] 13328 13404 + Pro GGG [ENA]
>WENV182550991 OJCB01005105 [OJCB] seawater metagenome; Sea water 1865 1941 + Pro GGG [ENA]
>WENV182556715 OJDG01042787 [OJDG] seawater metagenome; Sea water 81 5 - Pro GGG [ENA]
>WENV182558265 OJDL01027870 [OJDL] seawater metagenome; Sea water 202 126 - Pro GGG [ENA]
>WENV182559328 OJDO01018486 [OJDO] seawater metagenome; Sea water 203 127 - Pro GGG [ENA]
>WENV182560228 OJDT01010953 [OJDT] seawater metagenome; Sea water 1047 1123 + Pro GGG [ENA]
>WENV182560771 OJDU01050743 [OJDU] seawater metagenome; Sea water 124 48 - Pro GGG [ENA]
>WENV182563709 OJEC01018522 [OJEC] seawater metagenome; Sea water 14 90 + Pro GGG [ENA]
>WENV182567951 OJEP01005037 [OJEP] seawater metagenome; Sea water 1456 1532 + Pro GGG [ENA]
>WENV182571885 OJFK01024213 [OJFK] seawater metagenome; Sea water 329 253 - Pro GGG [ENA]
>WENV182575335 OJFU01007091 [OJFU] seawater metagenome; Sea water 981 905 - Pro GGG [ENA]
>WENV182579437 OJGS01010071 [OJGS] seawater metagenome; Sea water 610 534 - Pro GGG [ENA]
>WENV182580179 OJGU01010514 [OJGU] seawater metagenome; Sea water 1186 1262 + Pro GGG [ENA]
>WENV182585195 OJHH01003165 [OJHH] seawater metagenome; Sea water 1557 1481 - Pro GGG [ENA]
>WENV182588871 OJHY01000743 [OJHY] seawater metagenome; Sea water 3205 3129 - Pro GGG [ENA]
>WENV183056848 OLHJ01034871 [OLHJ] seawater metagenome; Sea water 177 101 - Pro GGG [ENA]
>WENV183060599 OLHY01000578 [OLHY] seawater metagenome; Sea water 2759 2683 - Pro GGG [ENA]
>WENV183065170 OLII01041737 [OLII] seawater metagenome; Sea water 114 190 + Pro GGG [ENA]
>WENV183619498 OOFQ01010405 [OOFQ] marine metagenome; seawater 763 839 + Pro GGG [ENA]
>WENV183624226 OOGC01003904 [OOGC] marine metagenome; seawater 189 265 + Pro GGG [ENA]
>WENV183625355 OOGF01016121 [OOGF] marine metagenome; seawater 436 512 + Pro GGG [ENA]
>WENV183626486 OOGI01014249 [OOGI] marine metagenome; seawater 143 67 - Pro GGG [ENA]
>WENV183707449 PDWI01008500 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 48550 48626 + Pro GGG [ENA]
>WENV183719426 PDWJ01013982 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 5843 5767 - Pro GGG [ENA]
>WENV183805198 PVBE010996745 [PVBE] marine metagenome; water 11842 11918 + Pro GGG [ENA]
>WENV170130953 CENR01072364 [CENR] marine metagenome genome assembly TARA_018_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 261 185 - Pro GGG [ENA]
>WENV170138147 CENW01090521 [CENW] marine metagenome genome assembly TARA_032_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 222 146 - Pro GGG [ENA]
>WENV170312304 CESM01232231 [CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 792 716 - Pro GGG [ENA]
>WENV170383682 CETX01135545 [CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4367 4291 - Pro GGG [ENA]
>WENV170395516 CEUC01118443 [CEUC] marine metagenome genome assembly TARA_137_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 263 339 + Pro GGG [ENA]
>WENV170397642 CEUD01080370 [CEUD] marine metagenome genome assembly TARA_137_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 303 227 - Pro GGG [ENA]
>WENV170413626 CEUK01126885 [CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 20859 20783 - Pro GGG [ENA]
>WENV170419808 CEUM01137912 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 11964 12040 + Pro GGG [ENA]
>WENV170421376 CEUN01070440 [CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 130 206 + Pro GGG [ENA]
>WENV170438317 CEUU01113007 [CEUU] marine metagenome genome assembly TARA_122_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 908 832 - Pro GGG [ENA]
>WENV170441251 CEUV01153176 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 11731 11655 - Pro GGG [ENA]
>WENV170456677 CEVA01224635 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 11680 11604 - Pro GGG [ENA]
>WENV170470088 CEVF01154690 [CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 11997 12073 + Pro GGG [ENA]
>WENV170480849 CEVL01143297 [CEVL] marine metagenome genome assembly TARA_146_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1252 1176 - Pro GGG [ENA]
>WENV170517171 CEWE01014866 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 20863 20787 - Pro GGG [ENA]
>WENV170568511 FLMP01045875 [FLMP] seawater metagenome; seawater 436 360 - Pro GGG [ENA]
>WENV170604723 FUWD010422416 [FUWD] metagenome; unknown 33 109 + Pro GGG [ENA]
>WENV170611917 FUWD012444456 [FUWD] metagenome; unknown 126 50 - Pro GGG [ENA]
>WENV170807731 MDSW01103443 [MDSW] marine metagenome; seawater 109762 109686 - Pro GGG [ENA]
>WENV170838970 MDSZ01177487 [MDSZ] marine metagenome; seawater 7059 7135 + Pro GGG [ENA]
>WENV170865974 MDTB01126807 [MDTB] marine metagenome; seawater 36293 36217 - Pro GGG [ENA]
>WENV170874974 MDTC01014142 [MDTC] marine metagenome; seawater 20311 20235 - Pro GGG [ENA]
>WENV170882121 MDTC01143985 [MDTC] marine metagenome; seawater 3005 3081 + Pro GGG [ENA]
>WENV170885257 MDTC01198674 [MDTC] marine metagenome; seawater 3268 3192 - Pro GGG [ENA]
>WENV170892277 MDTD01036195 [MDTD] marine metagenome; seawater 40366 40290 - Pro GGG [ENA]
>WENV170922717 MDTG01036261 [MDTG] marine metagenome; seawater 40382 40306 - Pro GGG [ENA]
>WENV170950720 MEHZ011513420 [MEHZ] marine metagenome; marine surface water 6690 6766 + Pro GGG [ENA]
>W09112194 ABXQ01000067 Gammaproteobacteria marine gamma proteobacterium HTCC2148 [ABXQ] 64806 64730 - Pro GGG [ENA]
>W1810196370 PKUR01000001 Gammaproteobacteria Halioglobus japonicus S1-36 [PKUR] 616577 616653 + Pro GGG [ENA]
>W1810582680 QEWO01000021 Gammaproteobacteria Parahaliea mediterranea DSM 21924 [QEWO] 818 742 - Pro GGG [ENA]
>W1810784220 QRAN01000005 Gammaproteobacteria Seongchinamella sediminis U0301 [QRAN] 261979 262055 + Pro GGG [ENA]
>SRA1027294 SRR035086.99167 454 Sequencing (SRP001807) 136 60 - Pro GGG [SRA]
>SRA1027470 SRR035086.129855 454 Sequencing (SRP001807) 196 272 + Pro GGG [SRA]
>WENV074578 AACY023983752 Marine microbial communities from Global Ocean Sampling (GOS) 385 461 + Pro GGG [ENA]
>W1610982693 LWEE01000001 Gammaproteobacteria Halioglobus sp. HI00S01 [LWEE] 39741 39665 - Pro GGG [ENA]
>W1610987129 LWHM01000033 Gammaproteobacteria Pseudohongiella nitratireducens SCS-49 [LWHM] 246004 245928 - Pro GGG [ENA]
>W1610987160 LWHN01000032 Gammaproteobacteria Pseudohongiella nitratireducens SCS-111 [LWHN] 246004 245928 - Pro GGG [ENA]
Identical group No.398892 (1 seq.)
>SRA1027038 SRR035086.49510 454 Sequencing (SRP001807) 338 414 + Pro GGG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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