tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001810)

Anticodon = GCC

HIT: 34 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.272498 (7 seq.)
>WENV170620580 FUWD013034495 [FUWD] metagenome; unknown 2817 2741 - Gly GCC [ENA] ¢þ
>WENV170628721 FUWD013251881 [FUWD] metagenome; unknown 2817 2741 - Gly GCC [ENA] ¢þ
>SRA1034179 SRR035089.14208 454 Sequencing (SRP001810) 17 93 + Gly GCC [SRA]
>SRA1040839 SRR035091.158531 454 Sequencing (SRP001812) 119 43 - Gly GCC [SRA]
>SRA1041378 SRR035091.234777 454 Sequencing (SRP001812) 54 130 + Gly GCC [SRA]
>SRA1041863 SRR035091.306369 454 Sequencing (SRP001812) 140 216 + Gly GCC [SRA]
>SRA1047787 SRR035094.41487 454 Sequencing (SRP001815) 258 334 + Gly GCC [SRA]
Identical group No.272531 (1 seq.)
>SRA1034308 SRR035089.53693 454 Sequencing (SRP001810) 317 393 + Gly GCC [SRA]
Identical group No.272632 (1 seq.)
>SRA1034829 SRR035089.181227 454 Sequencing (SRP001810) 117 41 - Gly GCC [SRA]
Identical group No.272830 (1 seq.)
>SRA1036013 SRR035089.426789 454 Sequencing (SRP001810) 196 120 - Gly GCC [SRA]
Identical group No.272905 (1 seq.)
>SRA1036474 SRR035089.530349 454 Sequencing (SRP001810) 58 134 + Gly GCC [SRA]
Identical group No.272964 (3 seq.)
>W1711502492 MKST01000003 Actinomycetota Solirubrobacterales bacterium 67-14 [MKST] 33060 33133 + Gly GCC [ENA] ¡û
>WENV170651756 JRYG01001761 [JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated 14039 13966 - Gly GCC [ENA] ¢þ
>SRA1036783 SRR035089.615082 454 Sequencing (SRP001810) 197 124 - Gly GCC [SRA]
Identical group No.453620 (10 seq.)
>WENV170612150 FUWD012513221 [FUWD] metagenome; unknown 290 215 - Gly GCC [ENA] ¢þ
>WENV170625846 FUWD013207233 [FUWD] metagenome; unknown 1903 1828 - Gly GCC [ENA] ¢þ
>WENV170634065 FUWD013408945 [FUWD] metagenome; unknown 1903 1828 - Gly GCC [ENA] ¢þ
>SRA1030853 SRR035087.339540 454 Sequencing (SRP001808) 468 393 - Gly GCC [SRA]
>SRA1032529 SRR035088.39268 454 Sequencing (SRP001809) 451 376 - Gly GCC [SRA]
>SRA1033233 SRR035088.202038 454 Sequencing (SRP001809) 392 317 - Gly GCC [SRA]
>SRA1035005 SRR035089.216786 454 Sequencing (SRP001810) 328 403 + Gly GCC [SRA]
>SRA1049706 SRR035095.122164 454 Sequencing (SRP001816) 68 143 + Gly GCC [SRA]
>W10123423 ADZZ01000070 Unclassified delta proteobacterium NaphS2 [ADZZ] 2782 2707 - Gly GCC [ENA] ¡û
>W11130221 ADZZ01000070 Unclassified delta proteobacterium NaphS2 [ADZZ] 2782 2707 - Gly GCC [ENA] ¡û
Identical group No.453639 (1 seq.)
>SRA1035135 SRR035089.243344 454 Sequencing (SRP001810) 306 381 + Gly GCC [SRA]
Identical group No.453647 (1 seq.)
>SRA1035178 SRR035089.253719 454 Sequencing (SRP001810) 329 401 + Gly GCC [SRA]
Identical group No.453751 (1 seq.)
>SRA1035731 SRR035089.363952 454 Sequencing (SRP001810) 334 409 + Gly GCC [SRA]
Identical group No.453785 (1 seq.)
>SRA1036001 SRR035089.424932 454 Sequencing (SRP001810) 451 376 - Gly GCC [SRA]
Identical group No.453822 (1 seq.)
>SRA1036215 SRR035089.473164 454 Sequencing (SRP001810) 175 251 + Gly GCC [SRA]
Identical group No.453880 (1 seq.)
>SRA1036615 SRR035089.563364 454 Sequencing (SRP001810) 336 411 + Gly GCC [SRA]
Identical group No.654382 (20 seq.)
>W131162458 AQYX01000174 Atribacterota Atribacteria bacterium SCGC AAA252-M02 OP9 bacterium SCGC AAA252-M02 [AQYX] 1576 1650 + Gly GCC [ENA] ¡û
>W131193731 ASOX01000020 Atribacterota Atribacteria bacterium SCGC AB-164-P05 OP9 bacterium SCGC AB-164-P05 [ASOX] 2197 2271 + Gly GCC [ENA] ¡û
>W131193767 ASPA01000029 Atribacterota Atribacteria bacterium SCGC AAA255-G05 OP9 bacterium SCGC AAA255-G05 [ASPA] 8014 8088 + Gly GCC [ENA] ¡û
>W131203645 ASZL01000006 Atribacterota Atribacteria bacterium SCGC AB-164-M20 OP9 bacterium SCGC AB-164-M20 [ASZL] 1576 1650 + Gly GCC [ENA] ¡û
>W141139544 AWNT01000010 Atribacterota Atribacteria bacterium JGI OTU-1 [AWNT] 1576 1650 + Gly GCC [ENA] ¡û
>WENV170600991 FUWD010151795 [FUWD] metagenome; unknown 520 594 + Gly GCC [ENA] ¢þ
>WENV170618896 FUWD012991347 [FUWD] metagenome; unknown 726 652 - Gly GCC [ENA] ¢þ
>WENV170626388 FUWD013221090 [FUWD] metagenome; unknown 1356 1282 - Gly GCC [ENA] ¢þ
>WENV170695462 LGVE01097978 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 146 72 - Gly GCC [ENA] ¢þ
>SRA1018715 SRR035082.336875 454 Sequencing (SRP001803) 103 177 + Gly GCC [SRA]
>SRA1026544 SRR035085.224939 454 Sequencing (SRP001806) 170 244 + Gly GCC [SRA]
>SRA1029498 SRR035087.137046 454 Sequencing (SRP001808) 121 195 + Gly GCC [SRA]
>SRA1029966 SRR035087.209149 454 Sequencing (SRP001808) 275 201 - Gly GCC [SRA]
>SRA1031047 SRR035087.364477 454 Sequencing (SRP001808) 17 91 + Gly GCC [SRA]
>SRA1031164 SRR035087.382926 454 Sequencing (SRP001808) 87 161 + Gly GCC [SRA]
>SRA1032365 SRR035087.612587 454 Sequencing (SRP001808) 312 386 + Gly GCC [SRA]
>SRA1032789 SRR035088.103199 454 Sequencing (SRP001809) 158 232 + Gly GCC [SRA]
>SRA1035990 SRR035089.421457 454 Sequencing (SRP001810) 449 523 + Gly GCC [SRA]
>SRA1049957 SRR035095.168237 454 Sequencing (SRP001816) 474 400 - Gly GCC [SRA]
>W1510076779 CDPL01000047 Atribacterota Atribacteria bacterium JGI 0000014-F07 [CDPL] 5784 5858 + Gly GCC [ENA] ¡û
Identical group No.654391 (8 seq.)
>WENV170622255 FUWD013094408 [FUWD] metagenome; unknown 1203 1129 - Gly GCC [ENA] ¢þ
>WENV170630476 FUWD013309143 [FUWD] metagenome; unknown 1203 1129 - Gly GCC [ENA] ¢þ
>SRA1026615 SRR035085.242322 454 Sequencing (SRP001806) 99 173 + Gly GCC [SRA]
>SRA1030630 SRR035087.307002 454 Sequencing (SRP001808) 71 145 + Gly GCC [SRA]
>SRA1032175 SRR035087.568285 454 Sequencing (SRP001808) 257 331 + Gly GCC [SRA]
>SRA1032367 SRR035087.613066 454 Sequencing (SRP001808) 257 331 + Gly GCC [SRA]
>SRA1036204 SRR035089.470970 454 Sequencing (SRP001810) 89 15 - Gly GCC [SRA]
>SRA1036388 SRR035089.508690 454 Sequencing (SRP001810) 116 42 - Gly GCC [SRA]
Identical group No.654432 (5 seq.)
>WENV170612086 FUWD012499731 [FUWD] metagenome; unknown 47 122 + Gly GCC [ENA] ¢þ
>SRA1031402 SRR035087.424380 454 Sequencing (SRP001808) 47 122 + Gly GCC [SRA]
>SRA1034321 SRR035089.56900 454 Sequencing (SRP001810) 78 3 - Gly GCC [SRA]
>SRA1034337 SRR035089.60723 454 Sequencing (SRP001810) 78 3 - Gly GCC [SRA]
>SRA1034491 SRR035089.109368 454 Sequencing (SRP001810) 78 3 - Gly GCC [SRA]
Identical group No.654448 (20 seq.)
>C171072598 CP018091 Cyanobacteriota Synechococcus sp. SynAce01 [CP018091] 1420082 1420011 - Gly GCC - ¡û
>WENV170316814 CESP01082933 [CESP] marine metagenome genome assembly TARA_099_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 141 212 + Gly GCC [ENA] ¢þ
>WENV170614216 FUWD012826709 [FUWD] metagenome; unknown 6624 6695 + Gly GCC [ENA] ¢þ
>SRA1027012 SRR035086.43681 454 Sequencing (SRP001807) 469 398 - Gly GCC [SRA]
>SRA1027057 SRR035086.53094 454 Sequencing (SRP001807) 469 398 - Gly GCC [SRA]
>SRA1027290 SRR035086.97403 454 Sequencing (SRP001807) 200 129 - Gly GCC [SRA]
>SRA1027953 SRR035086.225486 454 Sequencing (SRP001807) 123 194 + Gly GCC [SRA]
>SRA1028009 SRR035086.236908 454 Sequencing (SRP001807) 354 425 + Gly GCC [SRA]
>SRA1028299 SRR035086.294307 454 Sequencing (SRP001807) 340 269 - Gly GCC [SRA]
>SRA1028302 SRR035086.295384 454 Sequencing (SRP001807) 99 28 - Gly GCC [SRA]
>SRA1028453 SRR035086.329098 454 Sequencing (SRP001807) 123 194 + Gly GCC [SRA]
>SRA1034434 SRR035089.93895 454 Sequencing (SRP001810) 103 32 - Gly GCC [SRA]
>SRA1035762 SRR035089.370546 454 Sequencing (SRP001810) 93 164 + Gly GCC [SRA]
>SRA1051549 SRR035098.27738 454 Sequencing (SRP001819) 236 165 - Gly GCC [SRA]
>SRA1051622 SRR035098.41516 454 Sequencing (SRP001819) 210 139 - Gly GCC [SRA]
>SRA1051662 SRR035098.53762 454 Sequencing (SRP001819) 188 259 + Gly GCC [SRA]
>SRA1051905 SRR035098.100410 454 Sequencing (SRP001819) 172 243 + Gly GCC [SRA]
>SRA1052144 SRR035098.148909 454 Sequencing (SRP001819) 393 322 - Gly GCC [SRA]
>SRA1052177 SRR035098.156110 454 Sequencing (SRP001819) 75 4 - Gly GCC [SRA]
>SRA1053505 SRR035098.422261 454 Sequencing (SRP001819) 26 97 + Gly GCC [SRA]
Identical group No.654450 (1 seq.)
>SRA1034500 SRR035089.110694 454 Sequencing (SRP001810) 370 296 - Gly GCC [SRA]
Identical group No.654451 (3 seq.)
>WENV170612160 FUWD012518143 [FUWD] metagenome; unknown 174 102 - Gly GCC [ENA] ¢þ
>SRA1032714 SRR035088.85961 454 Sequencing (SRP001809) 174 102 - Gly GCC [SRA]
>SRA1034525 SRR035089.115305 454 Sequencing (SRP001810) 237 165 - Gly GCC [SRA]
Identical group No.654458 (6 seq.)
>WENV170620475 FUWD013032338 [FUWD] metagenome; unknown 1397 1323 - Gly GCC [ENA] ¢þ
>WENV170628618 FUWD013249804 [FUWD] metagenome; unknown 1397 1323 - Gly GCC [ENA] ¢þ
>SRA1033758 SRR035088.346898 454 Sequencing (SRP001809) 19 93 + Gly GCC [SRA]
>SRA1034103 SRR035088.488870 454 Sequencing (SRP001809) 86 160 + Gly GCC [SRA]
>SRA1034616 SRR035089.137627 454 Sequencing (SRP001810) 88 14 - Gly GCC [SRA]
>SRA1036085 SRR035089.443138 454 Sequencing (SRP001810) 266 192 - Gly GCC [SRA]
Identical group No.654468 (6 seq.)
>WENV170600337 FUWD010120717 [FUWD] metagenome; unknown 175 249 + Gly GCC [ENA] ¢þ
>WENV170626231 FUWD013217140 [FUWD] metagenome; unknown 2074 2148 + Gly GCC [ENA] ¢þ
>SRA1029377 SRR035087.118884 454 Sequencing (SRP001808) 447 521 + Gly GCC [SRA]
>SRA1032503 SRR035088.29103 454 Sequencing (SRP001809) 90 164 + Gly GCC [SRA]
>SRA1033412 SRR035088.249640 454 Sequencing (SRP001809) 321 247 - Gly GCC [SRA]
>SRA1034696 SRR035089.155038 454 Sequencing (SRP001810) 335 261 - Gly GCC [SRA]
Identical group No.654497 (23 seq.)
>WENV170619662 FUWD013018718 [FUWD] metagenome; unknown 2175 2101 - Gly GCC [ENA] ¢þ
>WENV170624354 FUWD013180297 [FUWD] metagenome; unknown 8347 8421 + Gly GCC [ENA] ¢þ
>WENV170627779 FUWD013237156 [FUWD] metagenome; unknown 2175 2101 - Gly GCC [ENA] ¢þ
>WENV170632640 FUWD013385496 [FUWD] metagenome; unknown 8347 8421 + Gly GCC [ENA] ¢þ
>SRA1029599 SRR035087.150182 454 Sequencing (SRP001808) 200 126 - Gly GCC [SRA]
>SRA1029985 SRR035087.211645 454 Sequencing (SRP001808) 364 438 + Gly GCC [SRA]
>SRA1030802 SRR035087.333239 454 Sequencing (SRP001808) 72 146 + Gly GCC [SRA]
>SRA1031140 SRR035087.379648 454 Sequencing (SRP001808) 181 107 - Gly GCC [SRA]
>SRA1031341 SRR035087.414928 454 Sequencing (SRP001808) 300 226 - Gly GCC [SRA]
>SRA1032421 SRR035087.627641 454 Sequencing (SRP001808) 134 60 - Gly GCC [SRA]
>SRA1032906 SRR035088.127852 454 Sequencing (SRP001809) 123 49 - Gly GCC [SRA]
>SRA1033511 SRR035088.276074 454 Sequencing (SRP001809) 37 111 + Gly GCC [SRA]
>SRA1035022 SRR035089.220959 454 Sequencing (SRP001810) 170 244 + Gly GCC [SRA]
>SRA1036124 SRR035089.449970 454 Sequencing (SRP001810) 321 247 - Gly GCC [SRA]
>SRA1036510 SRR035089.535274 454 Sequencing (SRP001810) 326 402 + Gly GCC [SRA]
>SRA1036701 SRR035089.587740 454 Sequencing (SRP001810) 328 254 - Gly GCC [SRA]
>SRA1047807 SRR035094.45272 454 Sequencing (SRP001815) 155 81 - Gly GCC [SRA]
>SRA1049977 SRR035095.171134 454 Sequencing (SRP001816) 160 86 - Gly GCC [SRA]
>SRA1050007 SRR035095.175467 454 Sequencing (SRP001816) 419 345 - Gly GCC [SRA]
>SRA1050057 SRR035095.185002 454 Sequencing (SRP001816) 203 129 - Gly GCC [SRA]
>SRA1050322 SRR035095.237279 454 Sequencing (SRP001816) 308 382 + Gly GCC [SRA]
>SRA1050560 SRR035095.292435 454 Sequencing (SRP001816) 405 331 - Gly GCC [SRA]
>SRA1050586 SRR035095.296976 454 Sequencing (SRP001816) 220 146 - Gly GCC [SRA]
Identical group No.654508 (3 seq.)
>WENV170618473 FUWD012970409 [FUWD] metagenome; unknown 216 290 + Gly GCC [ENA] ¢þ
>SRA1035163 SRR035089.250598 454 Sequencing (SRP001810) 35 110 + Gly GCC [SRA]
>SRA1035597 SRR035089.337763 454 Sequencing (SRP001810) 309 235 - Gly GCC [SRA]
Identical group No.654542 (6 seq.)
>WENV183797854 PVBE010369804 [PVBE] marine metagenome; water 1307 1233 - Gly GCC [ENA] ¢þ
>WENV170209221 CEPV01042057 [CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1617 1691 + Gly GCC [ENA] ¢þ
>WENV170224620 CEQE01067838 [CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 609 535 - Gly GCC [ENA] ¢þ
>WENV170382266 CETX01005055 [CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 319 393 + Gly GCC [ENA] ¢þ
>W1910725782 MGOH01000055 Chloroflexota Chloroflexi bacterium RBG_19FT_COMBO_48_23 [MGOH] 12505 12579 + Gly GCC [ENA] ¡û
>SRA1035547 SRR035089.328871 454 Sequencing (SRP001810) 428 354 - Gly GCC [SRA]
Identical group No.654558 (2 seq.)
>SRA1030502 SRR035087.288262 454 Sequencing (SRP001808) 252 326 + Gly GCC [SRA]
>SRA1035683 SRR035089.355070 454 Sequencing (SRP001810) 45 119 + Gly GCC [SRA]
Identical group No.654565 (1 seq.)
>SRA1035769 SRR035089.372831 454 Sequencing (SRP001810) 100 28 - Gly GCC [SRA]
Identical group No.654570 (1 seq.)
>SRA1035817 SRR035089.381323 454 Sequencing (SRP001810) 334 260 - Gly GCC [SRA]
Identical group No.654576 (1 seq.)
>SRA1035876 SRR035089.393243 454 Sequencing (SRP001810) 334 260 - Gly GCC [SRA]
Identical group No.654579 (2 seq.)
>WENV170608060 FUWD010888025 [FUWD] metagenome; unknown 2 76 + Gly GCC [ENA] ¢þ
>SRA1035902 SRR035089.399431 454 Sequencing (SRP001810) 2 76 + Gly GCC [SRA]
Identical group No.654585 (1 seq.)
>SRA1035972 SRR035089.414905 454 Sequencing (SRP001810) 198 272 + Gly GCC [SRA]
Identical group No.654591 (8 seq.)
>WENV180066731 MPLY02150971 [MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter 468 394 - Gly GCC [ENA] ¢þ
>WENV180076111 MPMA02259245 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 444 370 - Gly GCC [ENA] ¢þ
>W141066468 ARPL01000001 Chloroflexota Dehalococcoidia bacterium SCGC AB-539-J10 [ARPL] 5758 5832 + Gly GCC [ENA] ¡û
>WENV183796479 PVBE010252903 [PVBE] marine metagenome; water 16251 16325 + Gly GCC [ENA] ¢þ
>WENV170223927 CEQE01015622 [CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2469 2395 - Gly GCC [ENA] ¢þ
>WENV170880058 MDTC01105553 [MDTC] marine metagenome; seawater 31038 30964 - Gly GCC [ENA] ¢þ
>SRA1036061 SRR035089.435842 454 Sequencing (SRP001810) 15 89 + Gly GCC [SRA]
>SRA1036624 SRR035089.565984 454 Sequencing (SRP001810) 15 89 + Gly GCC [SRA]
Identical group No.654593 (3 seq.)
>W1711416142 MHBO01000220 Lentisphaerota Lentisphaerae bacterium RIFOXYB12_FULL_60_10 [MHBO] 16144 16218 + Gly GCC [ENA] ¡û
>W1711416213 MHBQ01000097 Lentisphaerota Lentisphaerae bacterium RIFOXYC12_FULL_60_16 [MHBQ] 5170 5244 + Gly GCC [ENA] ¡û
>SRA1036094 SRR035089.444692 454 Sequencing (SRP001810) 69 143 + Gly GCC [SRA]
Identical group No.779880 (1 seq.)
>SRA1034717 SRR035089.159192 454 Sequencing (SRP001810) 329 256 - Gly GCC [SRA]
Identical group No.779911 (5 seq.)
>WENV170621140 FUWD013050044 [FUWD] metagenome; unknown 600 527 - Gly GCC [ENA] ¢þ
>WENV170629309 FUWD013266734 [FUWD] metagenome; unknown 600 527 - Gly GCC [ENA] ¢þ
>SRA1030252 SRR035087.249651 454 Sequencing (SRP001808) 25 98 + Gly GCC [SRA]
>SRA1030943 SRR035087.352652 454 Sequencing (SRP001808) 211 284 + Gly GCC [SRA]
>SRA1035372 SRR035089.292903 454 Sequencing (SRP001810) 44 117 + Gly GCC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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