tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001810)

Anticodon = TCA

HIT: 6 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.593 (12 seq.)
>WENV180098233 MTBK01235062 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 22656 22753 + SeC TCA [ENA] ¢þ
>WENV183514110 OMKS01012035 [OMKS] sediment metagenome; hot spring sediment 2803 2900 + SeC TCA [ENA] ¢þ
>WENV170598384 FUWD010033747 [FUWD] metagenome; unknown 539 442 - SeC(p) TCA [ENA] ¢þ
>WENV170624228 FUWD013178104 [FUWD] metagenome; unknown 2327 2424 + SeC(p) TCA [ENA] ¢þ
>WENV170632510 FUWD013383714 [FUWD] metagenome; unknown 2327 2424 + SeC(p) TCA [ENA] ¢þ
>SRA1025764 SRR035085.79407 454 Sequencing (SRP001806) 128 225 + SeC TCA [SRA]
>SRA1029380 SRR035087.119274 454 Sequencing (SRP001808) 46 143 + SeC TCA [SRA]
>SRA1031222 SRR035087.394880 454 Sequencing (SRP001808) 123 26 - SeC TCA [SRA]
>SRA1034291 SRR035089.50464 454 Sequencing (SRP001810) 202 299 + SeC TCA [SRA]
>SRA1035179 SRR035089.253968 454 Sequencing (SRP001810) 143 46 - SeC TCA [SRA]
>SRA1035659 SRR035089.350986 454 Sequencing (SRP001810) 229 132 - SeC TCA [SRA]
>SRA1036415 SRR035089.515898 454 Sequencing (SRP001810) 149 52 - SeC TCA [SRA]
Identical group No.595 (1 seq.)
>SRA1035383 SRR035089.294111 454 Sequencing (SRP001810) 132 40 - SeC TCA [SRA]
Identical group No.596 (2 seq.)
>SRA1035997 SRR035089.423459 454 Sequencing (SRP001810) 60 157 + SeC TCA [SRA]
>C131010908 CP003985 Thermodesulfobacteriota Desulfocapsa sulfexigens DSM 10523 [CP003985] 934727 934630 - SeC TCA [Ensembl] ¡û
Identical group No.597 (7 seq.)
>WENV170616113 FUWD012877926 [FUWD] metagenome; unknown 88 185 + SeC(p) TCA [ENA] ¢þ
>SRA1036283 SRR035089.487651 454 Sequencing (SRP001810) 84 181 + SeC TCA [SRA]
>SRA1048139 SRR035094.114980 454 Sequencing (SRP001815) 97 194 + SeC TCA [SRA]
>SRA1049344 SRR035095.60930 454 Sequencing (SRP001816) 280 183 - SeC TCA [SRA]
>SRA1049614 SRR035095.104829 454 Sequencing (SRP001816) 280 183 - SeC TCA [SRA]
>SRA1049765 SRR035095.136111 454 Sequencing (SRP001816) 280 183 - SeC TCA [SRA]
>SRA1050017 SRR035095.177400 454 Sequencing (SRP001816) 280 183 - SeC TCA [SRA]
Identical group No.598 (5 seq.)
>WENV170001038 AGBJ01001339 [AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East 929 832 - SeC(p) TCA [ENA] ¢þ
>WENV170017152 BARS01058208 [BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula 281 184 - SeC(p) TCA [ENA] ¢þ
>WENV170612343 FUWD012581196 [FUWD] metagenome; unknown 151 54 - SeC(p) TCA [ENA] ¢þ
>SRA1036546 SRR035089.545472 454 Sequencing (SRP001810) 199 102 - SeC TCA [SRA]
>SRA1043181 SRR035092.64786 454 Sequencing (SRP001813) 30 127 + SeC TCA [SRA]
Identical group No.3348 (2 seq.)
>SRA1034232 SRR035089.31943 454 Sequencing (SRP001810) 280 189 - SeC TCA [SRA]
>SRA1035218 SRR035089.262105 454 Sequencing (SRP001810) 280 189 - SeC TCA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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