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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
454 Sequencing (SRP001811)
Anticodon = GGA
HIT:
20 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.11379 (1 seq.)
>SRA1039827
SRR035090.579397
454 Sequencing (SRP001811)
145
52
-
Ser
GGA
[SRA]
Identical group No.24673 (3 seq.)
>WENV170607779
FUWD010855598
[FUWD] metagenome; unknown
489
401
-
Ser
GGA
[ENA]
¢þ
>SRA1020914
SRR035083.183980
454 Sequencing (SRP001804)
489
401
-
Ser
GGA
[SRA]
>SRA1037673
SRR035090.172437
454 Sequencing (SRP001811)
246
158
-
Ser
GGA
[SRA]
Identical group No.28078 (1 seq.)
>SRA1039242
SRR035090.450029
454 Sequencing (SRP001811)
22
113
+
Ser
GGA
[SRA]
Identical group No.42653 (2 seq.)
>SRA1037079
SRR035090.71014
454 Sequencing (SRP001811)
270
181
-
Ser
GGA
[SRA]
>SRA1039185
SRR035090.438944
454 Sequencing (SRP001811)
274
185
-
Ser
GGA
[SRA]
Identical group No.42654 (1 seq.)
>SRA1039312
SRR035090.465004
454 Sequencing (SRP001811)
148
237
+
Ser
GGA
[SRA]
Identical group No.42655 (1 seq.)
>SRA1039796
SRR035090.572103
454 Sequencing (SRP001811)
209
297
+
Ser
GGA
[SRA]
Identical group No.45862 (133 seq.)
>W1711167311
LVWG01000027
Chlorobiota
Pelodictyon luteolum [LVWG]
57950
58037
+
Ser
GGA
[ENA]
¡û
>C016742
CP000096
Chlorobiota
Pelodictyon luteolum DSM 273 [CP000096]
908983
909069
+
Ser
GGA
[Ensembl]
¡û
>C018269
CP000607
Chlorobiota
Chlorobium phaeovibrioides [CP000607]
1190424
1190335
-
Ser
GGA
[Ensembl]
¡û
>WENV183812102
PYLN01000026
[PYLN] freshwater metagenome; meromictic lake
807
718
-
Ser
GGA
[ENA]
¢þ
>WENV170613663
FUWD012815692
[FUWD] metagenome; unknown
718
805
+
Ser
GGA
[ENA]
¢þ
>WENV170613757
FUWD012818317
[FUWD] metagenome; unknown
639
726
+
Ser
GGA
[ENA]
¢þ
>W09103365
AAJD01000012
Chlorobiota
Chlorobium phaeovibrioides DSM 265 [AAJD]
2943
2854
-
Ser
GGA
[ENA]
¡û
>SRA1016750
SRR035082.18551
454 Sequencing (SRP001803)
104
17
-
Ser
GGA
[SRA]
>SRA1019846
SRR035083.3735
454 Sequencing (SRP001804)
444
357
-
Ser
GGA
[SRA]
>SRA1019951
SRR035083.29514
454 Sequencing (SRP001804)
413
500
+
Ser
GGA
[SRA]
>SRA1020051
SRR035083.48957
454 Sequencing (SRP001804)
92
179
+
Ser
GGA
[SRA]
>SRA1020069
SRR035083.53099
454 Sequencing (SRP001804)
450
363
-
Ser
GGA
[SRA]
>SRA1020076
SRR035083.54387
454 Sequencing (SRP001804)
498
411
-
Ser
GGA
[SRA]
>SRA1020079
SRR035083.54816
454 Sequencing (SRP001804)
164
251
+
Ser
GGA
[SRA]
>SRA1020177
SRR035083.67400
454 Sequencing (SRP001804)
216
303
+
Ser
GGA
[SRA]
>SRA1020190
SRR035083.70140
454 Sequencing (SRP001804)
276
363
+
Ser
GGA
[SRA]
>SRA1020196
SRR035083.72828
454 Sequencing (SRP001804)
224
311
+
Ser
GGA
[SRA]
>SRA1020276
SRR035083.87936
454 Sequencing (SRP001804)
101
188
+
Ser
GGA
[SRA]
>SRA1020303
SRR035083.93826
454 Sequencing (SRP001804)
174
261
+
Ser
GGA
[SRA]
>SRA1020366
SRR035083.102252
454 Sequencing (SRP001804)
93
180
+
Ser
GGA
[SRA]
>SRA1020425
SRR035083.113278
454 Sequencing (SRP001804)
104
17
-
Ser
GGA
[SRA]
>SRA1020436
SRR035083.115370
454 Sequencing (SRP001804)
189
276
+
Ser
GGA
[SRA]
>SRA1020484
SRR035083.121583
454 Sequencing (SRP001804)
239
152
-
Ser
GGA
[SRA]
>SRA1020504
SRR035083.125256
454 Sequencing (SRP001804)
362
275
-
Ser
GGA
[SRA]
>SRA1020668
SRR035083.149651
454 Sequencing (SRP001804)
165
252
+
Ser
GGA
[SRA]
>SRA1020706
SRR035083.154062
454 Sequencing (SRP001804)
308
395
+
Ser
GGA
[SRA]
>SRA1020752
SRR035083.159705
454 Sequencing (SRP001804)
137
50
-
Ser
GGA
[SRA]
>SRA1020842
SRR035083.172248
454 Sequencing (SRP001804)
125
212
+
Ser
GGA
[SRA]
>SRA1020848
SRR035083.172784
454 Sequencing (SRP001804)
134
221
+
Ser
GGA
[SRA]
>SRA1020868
SRR035083.175016
454 Sequencing (SRP001804)
111
24
-
Ser
GGA
[SRA]
>SRA1020896
SRR035083.180800
454 Sequencing (SRP001804)
248
161
-
Ser
GGA
[SRA]
>SRA1020927
SRR035083.186504
454 Sequencing (SRP001804)
147
234
+
Ser
GGA
[SRA]
>SRA1020929
SRR035083.186817
454 Sequencing (SRP001804)
7
94
+
Ser
GGA
[SRA]
>SRA1021349
SRR035083.247038
454 Sequencing (SRP001804)
296
383
+
Ser
GGA
[SRA]
>SRA1021366
SRR035083.250892
454 Sequencing (SRP001804)
276
363
+
Ser
GGA
[SRA]
>SRA1021367
SRR035083.250961
454 Sequencing (SRP001804)
194
281
+
Ser
GGA
[SRA]
>SRA1021424
SRR035083.256683
454 Sequencing (SRP001804)
296
383
+
Ser
GGA
[SRA]
>SRA1021519
SRR035083.268671
454 Sequencing (SRP001804)
267
180
-
Ser
GGA
[SRA]
>SRA1021609
SRR035083.281173
454 Sequencing (SRP001804)
239
152
-
Ser
GGA
[SRA]
>SRA1021663
SRR035083.289624
454 Sequencing (SRP001804)
82
169
+
Ser
GGA
[SRA]
>SRA1021665
SRR035083.290088
454 Sequencing (SRP001804)
149
236
+
Ser
GGA
[SRA]
>SRA1021919
SRR035083.328011
454 Sequencing (SRP001804)
154
67
-
Ser
GGA
[SRA]
>SRA1021931
SRR035083.329054
454 Sequencing (SRP001804)
145
58
-
Ser
GGA
[SRA]
>SRA1021982
SRR035083.334635
454 Sequencing (SRP001804)
115
202
+
Ser
GGA
[SRA]
>SRA1021996
SRR035083.336121
454 Sequencing (SRP001804)
248
161
-
Ser
GGA
[SRA]
>SRA1022036
SRR035083.342775
454 Sequencing (SRP001804)
518
431
-
Ser
GGA
[SRA]
>SRA1022172
SRR035083.363676
454 Sequencing (SRP001804)
111
198
+
Ser
GGA
[SRA]
>SRA1022560
SRR035083.424332
454 Sequencing (SRP001804)
65
152
+
Ser
GGA
[SRA]
>SRA1022916
SRR035083.485807
454 Sequencing (SRP001804)
130
217
+
Ser
GGA
[SRA]
>SRA1022993
SRR035083.501585
454 Sequencing (SRP001804)
172
85
-
Ser
GGA
[SRA]
>SRA1032905
SRR035088.127814
454 Sequencing (SRP001809)
196
109
-
Ser
GGA
[SRA]
>SRA1033427
SRR035088.254204
454 Sequencing (SRP001809)
47
134
+
Ser
GGA
[SRA]
>SRA1033588
SRR035088.295604
454 Sequencing (SRP001809)
401
314
-
Ser
GGA
[SRA]
>SRA1034075
SRR035088.475534
454 Sequencing (SRP001809)
11
98
+
Ser
GGA
[SRA]
>SRA1034667
SRR035089.147670
454 Sequencing (SRP001810)
102
15
-
Ser
GGA
[SRA]
>SRA1035790
SRR035089.375554
454 Sequencing (SRP001810)
207
294
+
Ser
GGA
[SRA]
>SRA1036797
SRR035090.8328
454 Sequencing (SRP001811)
141
228
+
Ser
GGA
[SRA]
>SRA1036870
SRR035090.29678
454 Sequencing (SRP001811)
9
96
+
Ser
GGA
[SRA]
>SRA1036880
SRR035090.30820
454 Sequencing (SRP001811)
105
192
+
Ser
GGA
[SRA]
>SRA1036895
SRR035090.33588
454 Sequencing (SRP001811)
165
252
+
Ser
GGA
[SRA]
>SRA1036936
SRR035090.41016
454 Sequencing (SRP001811)
286
373
+
Ser
GGA
[SRA]
>SRA1036970
SRR035090.49317
454 Sequencing (SRP001811)
264
351
+
Ser
GGA
[SRA]
>SRA1037000
SRR035090.56157
454 Sequencing (SRP001811)
99
12
-
Ser
GGA
[SRA]
>SRA1037109
SRR035090.74648
454 Sequencing (SRP001811)
160
73
-
Ser
GGA
[SRA]
>SRA1037112
SRR035090.75505
454 Sequencing (SRP001811)
263
350
+
Ser
GGA
[SRA]
>SRA1037124
SRR035090.77529
454 Sequencing (SRP001811)
160
73
-
Ser
GGA
[SRA]
>SRA1037141
SRR035090.81174
454 Sequencing (SRP001811)
248
161
-
Ser
GGA
[SRA]
>SRA1037146
SRR035090.81865
454 Sequencing (SRP001811)
449
362
-
Ser
GGA
[SRA]
>SRA1037165
SRR035090.87019
454 Sequencing (SRP001811)
164
77
-
Ser
GGA
[SRA]
>SRA1037191
SRR035090.90994
454 Sequencing (SRP001811)
166
253
+
Ser
GGA
[SRA]
>SRA1037208
SRR035090.92747
454 Sequencing (SRP001811)
100
13
-
Ser
GGA
[SRA]
>SRA1037228
SRR035090.97074
454 Sequencing (SRP001811)
45
132
+
Ser
GGA
[SRA]
>SRA1037268
SRR035090.105702
454 Sequencing (SRP001811)
164
77
-
Ser
GGA
[SRA]
>SRA1037307
SRR035090.110677
454 Sequencing (SRP001811)
344
257
-
Ser
GGA
[SRA]
>SRA1037324
SRR035090.115010
454 Sequencing (SRP001811)
160
73
-
Ser
GGA
[SRA]
>SRA1037373
SRR035090.124516
454 Sequencing (SRP001811)
365
278
-
Ser
GGA
[SRA]
>SRA1037387
SRR035090.127345
454 Sequencing (SRP001811)
414
501
+
Ser
GGA
[SRA]
>SRA1037432
SRR035090.134927
454 Sequencing (SRP001811)
414
501
+
Ser
GGA
[SRA]
>SRA1037491
SRR035090.142333
454 Sequencing (SRP001811)
18
105
+
Ser
GGA
[SRA]
>SRA1037506
SRR035090.143521
454 Sequencing (SRP001811)
131
44
-
Ser
GGA
[SRA]
>SRA1037507
SRR035090.143942
454 Sequencing (SRP001811)
226
313
+
Ser
GGA
[SRA]
>SRA1037512
SRR035090.144542
454 Sequencing (SRP001811)
262
349
+
Ser
GGA
[SRA]
>SRA1037527
SRR035090.147523
454 Sequencing (SRP001811)
164
77
-
Ser
GGA
[SRA]
>SRA1037567
SRR035090.156025
454 Sequencing (SRP001811)
55
142
+
Ser
GGA
[SRA]
>SRA1037585
SRR035090.158424
454 Sequencing (SRP001811)
222
135
-
Ser
GGA
[SRA]
>SRA1037616
SRR035090.163694
454 Sequencing (SRP001811)
164
77
-
Ser
GGA
[SRA]
>SRA1037636
SRR035090.166552
454 Sequencing (SRP001811)
196
109
-
Ser
GGA
[SRA]
>SRA1037670
SRR035090.172327
454 Sequencing (SRP001811)
164
77
-
Ser
GGA
[SRA]
>SRA1037682
SRR035090.173811
454 Sequencing (SRP001811)
18
105
+
Ser
GGA
[SRA]
>SRA1037785
SRR035090.194795
454 Sequencing (SRP001811)
188
275
+
Ser
GGA
[SRA]
>SRA1037786
SRR035090.195507
454 Sequencing (SRP001811)
45
132
+
Ser
GGA
[SRA]
>SRA1037876
SRR035090.209999
454 Sequencing (SRP001811)
57
144
+
Ser
GGA
[SRA]
>SRA1037943
SRR035090.223256
454 Sequencing (SRP001811)
394
307
-
Ser
GGA
[SRA]
>SRA1037960
SRR035090.226919
454 Sequencing (SRP001811)
81
168
+
Ser
GGA
[SRA]
>SRA1037983
SRR035090.229455
454 Sequencing (SRP001811)
164
77
-
Ser
GGA
[SRA]
>SRA1038003
SRR035090.232742
454 Sequencing (SRP001811)
262
349
+
Ser
GGA
[SRA]
>SRA1038093
SRR035090.243768
454 Sequencing (SRP001811)
43
130
+
Ser
GGA
[SRA]
>SRA1038165
SRR035090.256946
454 Sequencing (SRP001811)
103
190
+
Ser
GGA
[SRA]
>SRA1038166
SRR035090.257281
454 Sequencing (SRP001811)
56
143
+
Ser
GGA
[SRA]
>SRA1038227
SRR035090.268083
454 Sequencing (SRP001811)
164
77
-
Ser
GGA
[SRA]
>SRA1038246
SRR035090.271807
454 Sequencing (SRP001811)
187
274
+
Ser
GGA
[SRA]
>SRA1038287
SRR035090.280299
454 Sequencing (SRP001811)
274
361
+
Ser
GGA
[SRA]
>SRA1038317
SRR035090.286793
454 Sequencing (SRP001811)
163
76
-
Ser
GGA
[SRA]
>SRA1038345
SRR035090.289935
454 Sequencing (SRP001811)
183
270
+
Ser
GGA
[SRA]
>SRA1038348
SRR035090.290236
454 Sequencing (SRP001811)
270
357
+
Ser
GGA
[SRA]
>SRA1038497
SRR035090.315758
454 Sequencing (SRP001811)
342
429
+
Ser
GGA
[SRA]
>SRA1038758
SRR035090.360722
454 Sequencing (SRP001811)
169
256
+
Ser
GGA
[SRA]
>SRA1038974
SRR035090.402772
454 Sequencing (SRP001811)
81
168
+
Ser
GGA
[SRA]
>SRA1039028
SRR035090.410499
454 Sequencing (SRP001811)
168
255
+
Ser
GGA
[SRA]
>SRA1039031
SRR035090.410842
454 Sequencing (SRP001811)
193
280
+
Ser
GGA
[SRA]
>SRA1039127
SRR035090.429265
454 Sequencing (SRP001811)
64
151
+
Ser
GGA
[SRA]
>SRA1039377
SRR035090.479878
454 Sequencing (SRP001811)
75
162
+
Ser
GGA
[SRA]
>SRA1039452
SRR035090.495070
454 Sequencing (SRP001811)
194
281
+
Ser
GGA
[SRA]
>SRA1039494
SRR035090.503548
454 Sequencing (SRP001811)
240
153
-
Ser
GGA
[SRA]
>SRA1039603
SRR035090.526292
454 Sequencing (SRP001811)
93
180
+
Ser
GGA
[SRA]
>SRA1039666
SRR035090.540089
454 Sequencing (SRP001811)
77
164
+
Ser
GGA
[SRA]
>SRA1039776
SRR035090.566301
454 Sequencing (SRP001811)
93
180
+
Ser
GGA
[SRA]
>SRA1039784
SRR035090.568573
454 Sequencing (SRP001811)
57
144
+
Ser
GGA
[SRA]
>SRA1039816
SRR035090.576429
454 Sequencing (SRP001811)
94
181
+
Ser
GGA
[SRA]
>SRA1039841
SRR035090.581553
454 Sequencing (SRP001811)
176
89
-
Ser
GGA
[SRA]
>SRA1039950
SRR035090.612002
454 Sequencing (SRP001811)
187
274
+
Ser
GGA
[SRA]
>SRA1045230
SRR035093.36375
454 Sequencing (SRP001814)
441
354
-
Ser
GGA
[SRA]
>SRA1045489
SRR035093.105647
454 Sequencing (SRP001814)
242
155
-
Ser
GGA
[SRA]
>SRA1045869
SRR035093.184344
454 Sequencing (SRP001814)
217
130
-
Ser
GGA
[SRA]
>SRA1049169
SRR035095.32185
454 Sequencing (SRP001816)
125
212
+
Ser
GGA
[SRA]
>SRA1053999
SRR035099.30376
454 Sequencing (SRP001820)
210
297
+
Ser
GGA
[SRA]
>SRA1054014
SRR035099.35365
454 Sequencing (SRP001820)
85
172
+
Ser
GGA
[SRA]
>SRA1054074
SRR035099.50857
454 Sequencing (SRP001820)
243
330
+
Ser
GGA
[SRA]
>SRA1054125
SRR035099.65754
454 Sequencing (SRP001820)
221
134
-
Ser
GGA
[SRA]
>SRA1054139
SRR035099.68400
454 Sequencing (SRP001820)
214
301
+
Ser
GGA
[SRA]
>SRA1054534
SRR035099.157554
454 Sequencing (SRP001820)
410
497
+
Ser
GGA
[SRA]
>SRA1054621
SRR035099.175042
454 Sequencing (SRP001820)
249
162
-
Ser
GGA
[SRA]
>W1610977642
LVWG01000027
Chlorobiota
Pelodictyon luteolum [LVWG]
57950
58037
+
Ser
GGA
[ENA]
¡û
Identical group No.57935 (2 seq.)
>WENV170608046
FUWD010886661
[FUWD] metagenome; unknown
483
394
-
Ser
GGA
[ENA]
¢þ
>SRA1039477
SRR035090.499999
454 Sequencing (SRP001811)
147
236
+
Ser
GGA
[SRA]
Identical group No.66780 (2 seq.)
>SRA1032754
SRR035088.95212
454 Sequencing (SRP001809)
10
99
+
Ser
GGA
[SRA]
>SRA1038841
SRR035090.377497
454 Sequencing (SRP001811)
207
118
-
Ser
GGA
[SRA]
Identical group No.66796 (1 seq.)
>SRA1039478
SRR035090.500353
454 Sequencing (SRP001811)
159
248
+
Ser
GGA
[SRA]
Identical group No.79255 (3 seq.)
>WENV170612368
FUWD012590134
[FUWD] metagenome; unknown
271
183
-
Ser
GGA
[ENA]
¢þ
>SRA1037942
SRR035090.223067
454 Sequencing (SRP001811)
271
183
-
Ser
GGA
[SRA]
>SRA1039229
SRR035090.447422
454 Sequencing (SRP001811)
271
183
-
Ser
GGA
[SRA]
Identical group No.83980 (1 seq.)
>SRA1036827
SRR035090.17812
454 Sequencing (SRP001811)
364
278
-
Ser
GGA
[SRA]
Identical group No.83982 (1 seq.)
>SRA1037978
SRR035090.228736
454 Sequencing (SRP001811)
157
71
-
Ser
GGA
[SRA]
Identical group No.87106 (31 seq.)
>W1710878772
LMRF01000005
Actinomycetota
Marmoricola sp. Leaf446 [LMRF]
50822
50909
+
Ser
GGA
[ENA]
¡û
>W131230049
AUHH01000009
Actinomycetota
Granulicoccus phenolivorans DSM 17626 [AUHH]
92231
92146
-
Ser
GGA
[ENA]
¡û
>WENV180114901
OAPS01067704
[OAPS] marine metagenome; sea water
200
113
-
Ser
GGA
[ENA]
¢þ
>WENV181308849
OFIT01026146
[OFIT] marine metagenome; seawater
249
162
-
Ser
GGA
[ENA]
¢þ
>WENV181315567
OFJP01005973
[OFJP] marine metagenome; seawater
135
48
-
Ser
GGA
[ENA]
¢þ
>WENV181384231
OFRH01040721
[OFRH] wastewater metagenome; Exp Tend NO 100WW
372
285
-
Ser
GGA
[ENA]
¢þ
>WENV181392944
OFRX01021076
[OFRX] seawater metagenome; seawater
364
451
+
Ser
GGA
[ENA]
¢þ
>WENV183615696
OOEB01095982
[OOEB] marine metagenome; sea ice
423
336
-
Ser
GGA
[ENA]
¢þ
>WENV183627095
OOGK01037236
[OOGK] marine metagenome; seawater
17
104
+
Ser
GGA
[ENA]
¢þ
>WENV183629292
OOGP01017711
[OOGP] marine metagenome; seawater
364
451
+
Ser
GGA
[ENA]
¢þ
>WENV170567732
FLMP01004555
[FLMP] seawater metagenome; seawater
1967
2054
+
Ser
GGA
[ENA]
¢þ
>WENV170571188
FLOH01000088
[FLOH] marine metagenome; water
18112
18025
-
Ser
GGA
[ENA]
¢þ
>WENV170571689
FLOH01000269
[FLOH] marine metagenome; water
54640
54555
-
Ser
GGA
[ENA]
¢þ
>WENV170627041
FUWD013230901
[FUWD] metagenome; unknown
841
928
+
Ser
GGA
[ENA]
¢þ
>WENV170627397
FUWD013232672
[FUWD] metagenome; unknown
43179
43092
-
Ser
GGA
[ENA]
¢þ
>WENV170951051
MEHZ011533142
[MEHZ] marine metagenome; marine surface water
2998
2911
-
Ser
GGA
[ENA]
¢þ
>WENV002091
AACY020058466
Marine microbial communities from Global Ocean Sampling (GOS)
132
43
-
Ser
GGA
[ENA]
>C191181619
CP040695
Actinomycetota
Nocardioides sp. S-1144 [CP040695]
347429
347342
-
Ser
GGA
-
¡û
>W141775183
JOJN01000002
Actinomycetota
Nocardioides aequoreus [JOJN]
580669
580756
+
Ser
GGA
[ENA]
¡û
>SRA1015978
SRR023846.292220
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
97
184
+
Ser
GGA
[SRA]
>SRA1024622
SRR035084.361801
454 Sequencing (SRP001805)
98
185
+
Ser
GGA
[SRA]
>SRA1036528
SRR035089.538706
454 Sequencing (SRP001810)
264
351
+
Ser
GGA
[SRA]
>SRA1039012
SRR035090.407438
454 Sequencing (SRP001811)
83
170
+
Ser
GGA
[SRA]
>SRA1045903
SRR035093.194065
454 Sequencing (SRP001814)
285
372
+
Ser
GGA
[SRA]
>SRA1053520
SRR035098.425790
454 Sequencing (SRP001819)
99
12
-
Ser
GGA
[SRA]
>C161082890
CP015079
Actinomycetota
Nocardioides dokdonensis FR1436 [CP015079]
1597123
1597036
-
Ser
GGA
[Ensembl]
¡û
>W1610067998
BCQZ01000002
Actinomycetota
Granulicoccus phenolivorans NBRC 107789 [BCQZ]
123169
123084
-
Ser
GGA
[ENA]
¡û
>W1610741118
LMRF01000005
Actinomycetota
Marmoricola sp. Leaf446 [LMRF]
50822
50909
+
Ser
GGA
[ENA]
¡û
>W1710065371
BCQZ01000002
Actinomycetota
Granulicoccus phenolivorans NBRC 107789 [BCQZ]
123169
123084
-
Ser
GGA
[ENA]
¡û
>W1710083205
BDJE01000028
Actinomycetota
Nocardioides sp. PD653-B2 [BDJE]
97522
97609
+
Ser
GGA
[ENA]
¡û
>W1710083304
BDJG01000005
Actinomycetota
Nocardioides sp. PD653 [BDJG]
97522
97609
+
Ser
GGA
[ENA]
¡û
Identical group No.95219 (4 seq.)
>WENV170571059
FLOH01000060
[FLOH] marine metagenome; water
22099
22012
-
Ser
GGA
[ENA]
¢þ
>WENV170571929
FLOH01000389
[FLOH] marine metagenome; water
14207
14120
-
Ser
GGA
[ENA]
¢þ
>WENV170618829
FUWD012988439
[FUWD] metagenome; unknown
264
179
-
Ser
GGA
[ENA]
¢þ
>SRA1036900
SRR035090.35165
454 Sequencing (SRP001811)
35
120
+
Ser
GGA
[SRA]
Identical group No.145015 (1 seq.)
>SRA1038792
SRR035090.367262
454 Sequencing (SRP001811)
12
98
+
Ser
GGA
[SRA]
Identical group No.165730 (8 seq.)
>WENV170611702
FUWD012377980
[FUWD] metagenome; unknown
327
242
-
Ser
GGA
[ENA]
¢þ
>WENV170620844
FUWD013041032
[FUWD] metagenome; unknown
847
764
-
Ser
GGA
[ENA]
¢þ
>WENV170628999
FUWD013258122
[FUWD] metagenome; unknown
847
764
-
Ser
GGA
[ENA]
¢þ
>SRA1033375
SRR035088.238270
454 Sequencing (SRP001809)
289
206
-
Ser
GGA
[SRA]
>SRA1038630
SRR035090.339386
454 Sequencing (SRP001811)
193
278
+
Ser
GGA
[SRA]
>SRA1041330
SRR035091.228416
454 Sequencing (SRP001812)
295
378
+
Ser
GGA
[SRA]
>SRA1042498
SRR035091.397804
454 Sequencing (SRP001812)
376
293
-
Ser
GGA
[SRA]
>SRA1048115
SRR035094.112207
454 Sequencing (SRP001815)
360
277
-
Ser
GGA
[SRA]
Identical group No.174283 (1 seq.)
>SRA1037080
SRR035090.71021
454 Sequencing (SRP001811)
20
104
+
Ser
GGA
[SRA]
Identical group No.174297 (1 seq.)
>SRA1039865
SRR035090.586695
454 Sequencing (SRP001811)
95
180
+
Ser
GGA
[SRA]
Identical group No.226326 (1 seq.)
>SRA1039555
SRR035090.515276
454 Sequencing (SRP001811)
133
213
+
Ser
GGA
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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