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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
454 Sequencing (SRP001811)
Anticodon = GTC
HIT:
22 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.239307 (1 seq.)
>SRA1038717
SRR035090.354274
454 Sequencing (SRP001811)
208
132
-
Asp
GTC
[SRA]
Identical group No.240800 (149 seq.)
>W1711167337
LVWG01000036
Chlorobiota
Pelodictyon luteolum [LVWG]
120132
120055
-
Asp
GTC
[ENA]
¡û
>C007027
AE006470
Chlorobiota
Chlorobaculum tepidum TLS [AE006470]
1738672
1738746
+
Asp
GTC
[Ensembl]
¡û
>C016774
CP000096
Chlorobiota
Pelodictyon luteolum DSM 273 [CP000096]
346020
345943
-
Asp
GTC
[Ensembl]
¡û
>C018279
CP000607
Chlorobiota
Chlorobium phaeovibrioides [CP000607]
411488
411414
-
Asp
GTC
[Ensembl]
¡û
>WENV183812122
PYLN01000144
[PYLN] freshwater metagenome; meromictic lake
222
147
-
Asp
GTC
[ENA]
¢þ
>WENV170613645
FUWD012815655
[FUWD] metagenome; unknown
5193
5118
-
Asp
GTC
[ENA]
¢þ
>WENV170613670
FUWD012816158
[FUWD] metagenome; unknown
86170
86093
-
Asp
GTC
[ENA]
¢þ
>W09103343
AAJD01000002
Chlorobiota
Chlorobium phaeovibrioides DSM 265 [AAJD]
108316
108241
-
Asp
GTC
[ENA]
¡û
>SRA1019934
SRR035083.24761
454 Sequencing (SRP001804)
400
325
-
Asp
GTC
[SRA]
>SRA1020025
SRR035083.43241
454 Sequencing (SRP001804)
454
379
-
Asp
GTC
[SRA]
>SRA1020063
SRR035083.52094
454 Sequencing (SRP001804)
243
168
-
Asp
GTC
[SRA]
>SRA1020111
SRR035083.58815
454 Sequencing (SRP001804)
248
173
-
Asp
GTC
[SRA]
>SRA1020167
SRR035083.65552
454 Sequencing (SRP001804)
301
226
-
Asp
GTC
[SRA]
>SRA1020332
SRR035083.98284
454 Sequencing (SRP001804)
304
379
+
Asp
GTC
[SRA]
>SRA1020347
SRR035083.100193
454 Sequencing (SRP001804)
171
246
+
Asp
GTC
[SRA]
>SRA1020388
SRR035083.106350
454 Sequencing (SRP001804)
242
167
-
Asp
GTC
[SRA]
>SRA1020493
SRR035083.122765
454 Sequencing (SRP001804)
243
168
-
Asp
GTC
[SRA]
>SRA1020530
SRR035083.130798
454 Sequencing (SRP001804)
393
318
-
Asp
GTC
[SRA]
>SRA1020733
SRR035083.157159
454 Sequencing (SRP001804)
125
200
+
Asp
GTC
[SRA]
>SRA1020860
SRR035083.174137
454 Sequencing (SRP001804)
88
163
+
Asp
GTC
[SRA]
>SRA1020882
SRR035083.178769
454 Sequencing (SRP001804)
292
217
-
Asp
GTC
[SRA]
>SRA1020943
SRR035083.188993
454 Sequencing (SRP001804)
156
231
+
Asp
GTC
[SRA]
>SRA1020953
SRR035083.190022
454 Sequencing (SRP001804)
486
411
-
Asp
GTC
[SRA]
>SRA1021302
SRR035083.239188
454 Sequencing (SRP001804)
184
109
-
Asp
GTC
[SRA]
>SRA1021314
SRR035083.240922
454 Sequencing (SRP001804)
346
421
+
Asp
GTC
[SRA]
>SRA1021317
SRR035083.241534
454 Sequencing (SRP001804)
327
402
+
Asp
GTC
[SRA]
>SRA1021407
SRR035083.255451
454 Sequencing (SRP001804)
128
203
+
Asp
GTC
[SRA]
>SRA1021446
SRR035083.260093
454 Sequencing (SRP001804)
319
394
+
Asp
GTC
[SRA]
>SRA1021512
SRR035083.268186
454 Sequencing (SRP001804)
73
148
+
Asp
GTC
[SRA]
>SRA1021555
SRR035083.272582
454 Sequencing (SRP001804)
195
120
-
Asp
GTC
[SRA]
>SRA1021584
SRR035083.276559
454 Sequencing (SRP001804)
234
309
+
Asp
GTC
[SRA]
>SRA1021637
SRR035083.284211
454 Sequencing (SRP001804)
347
422
+
Asp
GTC
[SRA]
>SRA1021639
SRR035083.284610
454 Sequencing (SRP001804)
185
110
-
Asp
GTC
[SRA]
>SRA1021728
SRR035083.297966
454 Sequencing (SRP001804)
38
113
+
Asp
GTC
[SRA]
>SRA1021742
SRR035083.300628
454 Sequencing (SRP001804)
238
313
+
Asp
GTC
[SRA]
>SRA1021869
SRR035083.321391
454 Sequencing (SRP001804)
282
357
+
Asp
GTC
[SRA]
>SRA1021894
SRR035083.326026
454 Sequencing (SRP001804)
79
154
+
Asp
GTC
[SRA]
>SRA1022171
SRR035083.363552
454 Sequencing (SRP001804)
67
142
+
Asp
GTC
[SRA]
>SRA1022240
SRR035083.373215
454 Sequencing (SRP001804)
195
120
-
Asp
GTC
[SRA]
>SRA1022324
SRR035083.389465
454 Sequencing (SRP001804)
101
26
-
Asp
GTC
[SRA]
>SRA1022328
SRR035083.390297
454 Sequencing (SRP001804)
101
26
-
Asp
GTC
[SRA]
>SRA1022451
SRR035083.406456
454 Sequencing (SRP001804)
175
250
+
Asp
GTC
[SRA]
>SRA1022500
SRR035083.414526
454 Sequencing (SRP001804)
195
120
-
Asp
GTC
[SRA]
>SRA1022523
SRR035083.420317
454 Sequencing (SRP001804)
255
180
-
Asp
GTC
[SRA]
>SRA1022551
SRR035083.423132
454 Sequencing (SRP001804)
274
349
+
Asp
GTC
[SRA]
>SRA1022599
SRR035083.430412
454 Sequencing (SRP001804)
57
132
+
Asp
GTC
[SRA]
>SRA1022761
SRR035083.455418
454 Sequencing (SRP001804)
137
62
-
Asp
GTC
[SRA]
>SRA1022778
SRR035083.459111
454 Sequencing (SRP001804)
106
31
-
Asp
GTC
[SRA]
>SRA1022824
SRR035083.467817
454 Sequencing (SRP001804)
312
390
+
Asp
GTC
[SRA]
>SRA1022863
SRR035083.475224
454 Sequencing (SRP001804)
196
121
-
Asp
GTC
[SRA]
>SRA1022891
SRR035083.479429
454 Sequencing (SRP001804)
50
125
+
Asp
GTC
[SRA]
>SRA1022904
SRR035083.483362
454 Sequencing (SRP001804)
135
58
-
Asp
GTC
[SRA]
>SRA1022987
SRR035083.500401
454 Sequencing (SRP001804)
170
95
-
Asp
GTC
[SRA]
>SRA1023053
SRR035083.512485
454 Sequencing (SRP001804)
282
357
+
Asp
GTC
[SRA]
>SRA1023059
SRR035083.513418
454 Sequencing (SRP001804)
247
170
-
Asp
GTC
[SRA]
>SRA1025849
SRR035085.94086
454 Sequencing (SRP001806)
87
10
-
Asp
GTC
[SRA]
>SRA1029199
SRR035087.91266
454 Sequencing (SRP001808)
254
179
-
Asp
GTC
[SRA]
>SRA1032606
SRR035088.61214
454 Sequencing (SRP001809)
182
107
-
Asp
GTC
[SRA]
>SRA1032704
SRR035088.82623
454 Sequencing (SRP001809)
192
267
+
Asp
GTC
[SRA]
>SRA1032803
SRR035088.106465
454 Sequencing (SRP001809)
354
279
-
Asp
GTC
[SRA]
>SRA1033033
SRR035088.155693
454 Sequencing (SRP001809)
261
186
-
Asp
GTC
[SRA]
>SRA1033118
SRR035088.178281
454 Sequencing (SRP001809)
481
406
-
Asp
GTC
[SRA]
>SRA1033341
SRR035088.230067
454 Sequencing (SRP001809)
162
237
+
Asp
GTC
[SRA]
>SRA1034527
SRR035089.116170
454 Sequencing (SRP001810)
187
112
-
Asp
GTC
[SRA]
>SRA1034615
SRR035089.137419
454 Sequencing (SRP001810)
345
270
-
Asp
GTC
[SRA]
>SRA1034642
SRR035089.142754
454 Sequencing (SRP001810)
291
216
-
Asp
GTC
[SRA]
>SRA1034767
SRR035089.169206
454 Sequencing (SRP001810)
140
65
-
Asp
GTC
[SRA]
>SRA1035029
SRR035089.222057
454 Sequencing (SRP001810)
397
322
-
Asp
GTC
[SRA]
>SRA1036037
SRR035089.431527
454 Sequencing (SRP001810)
155
80
-
Asp
GTC
[SRA]
>SRA1036829
SRR035090.19063
454 Sequencing (SRP001811)
361
286
-
Asp
GTC
[SRA]
>SRA1036864
SRR035090.28459
454 Sequencing (SRP001811)
228
151
-
Asp
GTC
[SRA]
>SRA1036866
SRR035090.28943
454 Sequencing (SRP001811)
64
139
+
Asp
GTC
[SRA]
>SRA1036894
SRR035090.32921
454 Sequencing (SRP001811)
230
155
-
Asp
GTC
[SRA]
>SRA1036935
SRR035090.40975
454 Sequencing (SRP001811)
182
107
-
Asp
GTC
[SRA]
>SRA1036942
SRR035090.42725
454 Sequencing (SRP001811)
201
126
-
Asp
GTC
[SRA]
>SRA1037047
SRR035090.64099
454 Sequencing (SRP001811)
360
285
-
Asp
GTC
[SRA]
>SRA1037145
SRR035090.81771
454 Sequencing (SRP001811)
232
307
+
Asp
GTC
[SRA]
>SRA1037173
SRR035090.87426
454 Sequencing (SRP001811)
227
302
+
Asp
GTC
[SRA]
>SRA1037196
SRR035090.91612
454 Sequencing (SRP001811)
118
193
+
Asp
GTC
[SRA]
>SRA1037278
SRR035090.106437
454 Sequencing (SRP001811)
113
38
-
Asp
GTC
[SRA]
>SRA1037294
SRR035090.108192
454 Sequencing (SRP001811)
304
229
-
Asp
GTC
[SRA]
>SRA1037396
SRR035090.128018
454 Sequencing (SRP001811)
358
433
+
Asp
GTC
[SRA]
>SRA1037459
SRR035090.137643
454 Sequencing (SRP001811)
201
126
-
Asp
GTC
[SRA]
>SRA1037462
SRR035090.138036
454 Sequencing (SRP001811)
130
55
-
Asp
GTC
[SRA]
>SRA1037464
SRR035090.138069
454 Sequencing (SRP001811)
228
153
-
Asp
GTC
[SRA]
>SRA1037516
SRR035090.145033
454 Sequencing (SRP001811)
171
246
+
Asp
GTC
[SRA]
>SRA1037559
SRR035090.154830
454 Sequencing (SRP001811)
327
252
-
Asp
GTC
[SRA]
>SRA1037592
SRR035090.159927
454 Sequencing (SRP001811)
294
219
-
Asp
GTC
[SRA]
>SRA1037604
SRR035090.162284
454 Sequencing (SRP001811)
161
86
-
Asp
GTC
[SRA]
>SRA1037710
SRR035090.178084
454 Sequencing (SRP001811)
81
6
-
Asp
GTC
[SRA]
>SRA1037739
SRR035090.185071
454 Sequencing (SRP001811)
330
405
+
Asp
GTC
[SRA]
>SRA1037854
SRR035090.204806
454 Sequencing (SRP001811)
431
506
+
Asp
GTC
[SRA]
>SRA1037885
SRR035090.211749
454 Sequencing (SRP001811)
173
248
+
Asp
GTC
[SRA]
>SRA1037913
SRR035090.217673
454 Sequencing (SRP001811)
385
310
-
Asp
GTC
[SRA]
>SRA1037915
SRR035090.217808
454 Sequencing (SRP001811)
25
100
+
Asp
GTC
[SRA]
>SRA1037997
SRR035090.231383
454 Sequencing (SRP001811)
242
167
-
Asp
GTC
[SRA]
>SRA1038001
SRR035090.232353
454 Sequencing (SRP001811)
101
26
-
Asp
GTC
[SRA]
>SRA1038065
SRR035090.241351
454 Sequencing (SRP001811)
346
271
-
Asp
GTC
[SRA]
>SRA1038122
SRR035090.249420
454 Sequencing (SRP001811)
189
114
-
Asp
GTC
[SRA]
>SRA1038146
SRR035090.254319
454 Sequencing (SRP001811)
337
412
+
Asp
GTC
[SRA]
>SRA1038168
SRR035090.257759
454 Sequencing (SRP001811)
277
352
+
Asp
GTC
[SRA]
>SRA1038188
SRR035090.260734
454 Sequencing (SRP001811)
217
292
+
Asp
GTC
[SRA]
>SRA1038264
SRR035090.276513
454 Sequencing (SRP001811)
372
297
-
Asp
GTC
[SRA]
>SRA1038288
SRR035090.280359
454 Sequencing (SRP001811)
246
171
-
Asp
GTC
[SRA]
>SRA1038306
SRR035090.284671
454 Sequencing (SRP001811)
349
274
-
Asp
GTC
[SRA]
>SRA1038507
SRR035090.317894
454 Sequencing (SRP001811)
280
355
+
Asp
GTC
[SRA]
>SRA1038567
SRR035090.328306
454 Sequencing (SRP001811)
57
132
+
Asp
GTC
[SRA]
>SRA1038642
SRR035090.342220
454 Sequencing (SRP001811)
201
126
-
Asp
GTC
[SRA]
>SRA1038687
SRR035090.350196
454 Sequencing (SRP001811)
343
418
+
Asp
GTC
[SRA]
>SRA1038699
SRR035090.351723
454 Sequencing (SRP001811)
344
419
+
Asp
GTC
[SRA]
>SRA1038722
SRR035090.354561
454 Sequencing (SRP001811)
209
134
-
Asp
GTC
[SRA]
>SRA1038747
SRR035090.359227
454 Sequencing (SRP001811)
56
131
+
Asp
GTC
[SRA]
>SRA1038753
SRR035090.360194
454 Sequencing (SRP001811)
11
86
+
Asp
GTC
[SRA]
>SRA1038775
SRR035090.363836
454 Sequencing (SRP001811)
318
243
-
Asp
GTC
[SRA]
>SRA1038854
SRR035090.380403
454 Sequencing (SRP001811)
260
185
-
Asp
GTC
[SRA]
>SRA1038855
SRR035090.381107
454 Sequencing (SRP001811)
379
454
+
Asp
GTC
[SRA]
>SRA1038889
SRR035090.388971
454 Sequencing (SRP001811)
267
192
-
Asp
GTC
[SRA]
>SRA1038896
SRR035090.390215
454 Sequencing (SRP001811)
171
96
-
Asp
GTC
[SRA]
>SRA1038910
SRR035090.392403
454 Sequencing (SRP001811)
199
124
-
Asp
GTC
[SRA]
>SRA1038955
SRR035090.400252
454 Sequencing (SRP001811)
57
132
+
Asp
GTC
[SRA]
>SRA1038962
SRR035090.401275
454 Sequencing (SRP001811)
292
367
+
Asp
GTC
[SRA]
>SRA1038989
SRR035090.404327
454 Sequencing (SRP001811)
169
244
+
Asp
GTC
[SRA]
>SRA1039208
SRR035090.443589
454 Sequencing (SRP001811)
144
221
+
Asp
GTC
[SRA]
>SRA1039211
SRR035090.445157
454 Sequencing (SRP001811)
263
188
-
Asp
GTC
[SRA]
>SRA1039215
SRR035090.445866
454 Sequencing (SRP001811)
204
129
-
Asp
GTC
[SRA]
>SRA1039243
SRR035090.450250
454 Sequencing (SRP001811)
233
308
+
Asp
GTC
[SRA]
>SRA1039268
SRR035090.455081
454 Sequencing (SRP001811)
282
357
+
Asp
GTC
[SRA]
>SRA1039359
SRR035090.477166
454 Sequencing (SRP001811)
58
133
+
Asp
GTC
[SRA]
>SRA1039455
SRR035090.496071
454 Sequencing (SRP001811)
369
294
-
Asp
GTC
[SRA]
>SRA1039582
SRR035090.520322
454 Sequencing (SRP001811)
86
161
+
Asp
GTC
[SRA]
>SRA1039637
SRR035090.534263
454 Sequencing (SRP001811)
345
270
-
Asp
GTC
[SRA]
>SRA1039771
SRR035090.565874
454 Sequencing (SRP001811)
25
100
+
Asp
GTC
[SRA]
>SRA1039927
SRR035090.605288
454 Sequencing (SRP001811)
199
124
-
Asp
GTC
[SRA]
>SRA1039953
SRR035090.612556
454 Sequencing (SRP001811)
11
86
+
Asp
GTC
[SRA]
>SRA1043070
SRR035092.36134
454 Sequencing (SRP001813)
436
361
-
Asp
GTC
[SRA]
>SRA1043611
SRR035092.148490
454 Sequencing (SRP001813)
439
364
-
Asp
GTC
[SRA]
>SRA1045659
SRR035093.142692
454 Sequencing (SRP001814)
76
-1
-
Asp
GTC
[SRA]
>SRA1045961
SRR035093.206390
454 Sequencing (SRP001814)
248
173
-
Asp
GTC
[SRA]
>SRA1046134
SRR035093.243331
454 Sequencing (SRP001814)
222
147
-
Asp
GTC
[SRA]
>SRA1047223
SRR035093.487213
454 Sequencing (SRP001814)
27
102
+
Asp
GTC
[SRA]
>SRA1047814
SRR035094.46168
454 Sequencing (SRP001815)
257
182
-
Asp
GTC
[SRA]
>SRA1049746
SRR035095.132103
454 Sequencing (SRP001816)
235
160
-
Asp
GTC
[SRA]
>SRA1049753
SRR035095.134575
454 Sequencing (SRP001816)
376
301
-
Asp
GTC
[SRA]
>SRA1054286
SRR035099.100189
454 Sequencing (SRP001820)
100
25
-
Asp
GTC
[SRA]
>SRA1054345
SRR035099.111395
454 Sequencing (SRP001820)
195
120
-
Asp
GTC
[SRA]
>SRA1054366
SRR035099.116255
454 Sequencing (SRP001820)
303
228
-
Asp
GTC
[SRA]
>SRA1054588
SRR035099.169159
454 Sequencing (SRP001820)
66
141
+
Asp
GTC
[SRA]
>SRA1054693
SRR035099.189538
454 Sequencing (SRP001820)
343
268
-
Asp
GTC
[SRA]
>W1610977668
LVWG01000036
Chlorobiota
Pelodictyon luteolum [LVWG]
120132
120055
-
Asp
GTC
[ENA]
¡û
Identical group No.240904 (7 seq.)
>WENV170620407
FUWD013031063
[FUWD] metagenome; unknown
2299
2376
+
Asp
GTC
[ENA]
¢þ
>WENV170628549
FUWD013248599
[FUWD] metagenome; unknown
2299
2376
+
Asp
GTC
[ENA]
¢þ
>SRA1035509
SRR035089.320546
454 Sequencing (SRP001810)
541
464
-
Asp
GTC
[SRA]
>SRA1036404
SRR035089.512843
454 Sequencing (SRP001810)
286
209
-
Asp
GTC
[SRA]
>SRA1038294
SRR035090.281667
454 Sequencing (SRP001811)
220
297
+
Asp
GTC
[SRA]
>SRA1038616
SRR035090.337392
454 Sequencing (SRP001811)
373
450
+
Asp
GTC
[SRA]
>SRA1039305
SRR035090.464373
454 Sequencing (SRP001811)
237
312
+
Asp
GTC
[SRA]
Identical group No.247864 (6 seq.)
>WENV170608088
FUWD010892055
[FUWD] metagenome; unknown
300
223
-
Asp
GTC
[ENA]
¢þ
>SRA1016788
SRR035082.28815
454 Sequencing (SRP001803)
168
245
+
Asp
GTC
[SRA]
>SRA1038385
SRR035090.295875
454 Sequencing (SRP001811)
301
224
-
Asp
GTC
[SRA]
>SRA1039850
SRR035090.583130
454 Sequencing (SRP001811)
299
222
-
Asp
GTC
[SRA]
>SRA1039937
SRR035090.607909
454 Sequencing (SRP001811)
300
223
-
Asp
GTC
[SRA]
>SRA1054066
SRR035099.48742
454 Sequencing (SRP001820)
327
404
+
Asp
GTC
[SRA]
Identical group No.247873 (4 seq.)
>WENV170608071
FUWD010889842
[FUWD] metagenome; unknown
63
139
+
Asp
GTC
[ENA]
¢þ
>SRA1036834
SRR035090.20283
454 Sequencing (SRP001811)
67
143
+
Asp
GTC
[SRA]
>SRA1037168
SRR035090.87210
454 Sequencing (SRP001811)
9
85
+
Asp
GTC
[SRA]
>SRA1054506
SRR035099.148583
454 Sequencing (SRP001820)
98
22
-
Asp
GTC
[SRA]
Identical group No.253983 (5 seq.)
>WENV170602342
FUWD010229034
[FUWD] metagenome; unknown
295
218
-
Asp
GTC
[ENA]
¢þ
>SRA1033636
SRR035088.309149
454 Sequencing (SRP001809)
134
57
-
Asp
GTC
[SRA]
>SRA1038979
SRR035090.402943
454 Sequencing (SRP001811)
473
396
-
Asp
GTC
[SRA]
>SRA1040553
SRR035091.114309
454 Sequencing (SRP001812)
79
156
+
Asp
GTC
[SRA]
>SRA1042422
SRR035091.384924
454 Sequencing (SRP001812)
217
140
-
Asp
GTC
[SRA]
Identical group No.263977 (1 seq.)
>SRA1038918
SRR035090.394054
454 Sequencing (SRP001811)
474
399
-
Asp
GTC
[SRA]
Identical group No.263978 (1 seq.)
>SRA1038938
SRR035090.397757
454 Sequencing (SRP001811)
367
290
-
Asp
GTC
[SRA]
Identical group No.263983 (1 seq.)
>SRA1039511
SRR035090.506927
454 Sequencing (SRP001811)
294
216
-
Asp
GTC
[SRA]
Identical group No.272350 (2 seq.)
>SRA1026060
SRR035085.134203
454 Sequencing (SRP001806)
322
247
-
Asp
GTC
[SRA]
>SRA1037569
SRR035090.156541
454 Sequencing (SRP001811)
219
144
-
Asp
GTC
[SRA]
Identical group No.272617 (3 seq.)
>WENV170612262
FUWD012557447
[FUWD] metagenome; unknown
23
99
+
Asp
GTC
[ENA]
¢þ
>SRA1034796
SRR035089.174737
454 Sequencing (SRP001810)
308
384
+
Asp
GTC
[SRA]
>SRA1039435
SRR035090.491527
454 Sequencing (SRP001811)
142
218
+
Asp
GTC
[SRA]
Identical group No.302448 (15 seq.)
>W131176843
ARKJ01000013
Bacteroidota
Flavobacterium rivuli DSM 21788 [ARKJ]
14185
14261
+
Asp
GTC
[ENA]
¡û
>W131176855
ARKJ01000019
Bacteroidota
Flavobacterium rivuli DSM 21788 [ARKJ]
20406
20332
-
Asp
GTC
[ENA]
¡û
>WENV181312283
OFJB01070866
[OFJB] sludge metagenome; sludge
42
116
+
Asp
GTC
[ENA]
¢þ
>WENV170228760
CEQG01038458
[CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
50002
50078
+
Asp
GTC
[ENA]
¢þ
>WENV170248594
CEQQ01142746
[CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
530
454
-
Asp
GTC
[ENA]
¢þ
>WENV170642634
JFJP01042640
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
4961
5037
+
Asp
GTC
[ENA]
¢þ
>C181175917
CP029186
Bacteroidota
Flavobacterium album HYN0059 [CP029186]
529655
529581
-
Asp
GTC
-
¡û
>W1911139363
NOXV01000214
Bacteroidota
Flavobacterium cyanobacteriorum TH021 [NOXV]
6207
6281
+
Asp
GTC
[ENA]
¡û
>SRA1003116
SRR002326.210811
The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
43
117
+
Asp
GTC
[SRA]
>SRA1038843
SRR035090.378975
454 Sequencing (SRP001811)
145
71
-
Asp
GTC
[SRA]
>W1610535094
JRLX01000010
Bacteroidota
Flavobacterium rivuli WB 3.3-2 = DSM 21788 [JRLX]
19737
19663
-
Asp
GTC
[ENA]
¡û
>W1610535095
JRLX01000014
Bacteroidota
Flavobacterium rivuli WB 3.3-2 = DSM 21788 [JRLX]
13532
13608
+
Asp
GTC
[ENA]
¡û
>W1710555828
FOJT01000004
Bacteroidota
Flavobacterium swingsii [FOJT]
286489
286565
+
Asp
GTC
[ENA]
¡û
>W1710637330
JRLX01000010
Bacteroidota
Flavobacterium rivuli WB 3.3-2 = DSM 21788 [JRLX]
19737
19663
-
Asp
GTC
[ENA]
¡û
>W1710637331
JRLX01000014
Bacteroidota
Flavobacterium rivuli WB 3.3-2 = DSM 21788 [JRLX]
13532
13608
+
Asp
GTC
[ENA]
¡û
Identical group No.321153 (5 seq.)
>WENV170608274
FUWD010912280
[FUWD] metagenome; unknown
78
2
-
Asp
GTC
[ENA]
¢þ
>SRA1039831
SRR035090.579665
454 Sequencing (SRP001811)
313
237
-
Asp
GTC
[SRA]
>SRA1053934
SRR035099.7102
454 Sequencing (SRP001820)
235
159
-
Asp
GTC
[SRA]
>SRA1053968
SRR035099.19981
454 Sequencing (SRP001820)
235
159
-
Asp
GTC
[SRA]
>SRA1054193
SRR035099.81135
454 Sequencing (SRP001820)
236
160
-
Asp
GTC
[SRA]
Identical group No.321154 (7 seq.)
>WENV183716195
PDWI01293113
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
277
353
+
Asp
GTC
[ENA]
¢þ
>WENV170622862
FUWD013124283
[FUWD] metagenome; unknown
229
153
-
Asp
GTC
[ENA]
¢þ
>WENV170631081
FUWD013337820
[FUWD] metagenome; unknown
229
153
-
Asp
GTC
[ENA]
¢þ
>SRA1037037
SRR035090.62270
454 Sequencing (SRP001811)
134
58
-
Asp
GTC
[SRA]
>SRA1037041
SRR035090.63022
454 Sequencing (SRP001811)
133
57
-
Asp
GTC
[SRA]
>SRA1038187
SRR035090.260534
454 Sequencing (SRP001811)
134
58
-
Asp
GTC
[SRA]
>SRA1053995
SRR035099.27991
454 Sequencing (SRP001820)
321
245
-
Asp
GTC
[SRA]
Identical group No.321198 (7 seq.)
>WENV170612187
FUWD012527490
[FUWD] metagenome; unknown
314
390
+
Asp
GTC
[ENA]
¢þ
>SRA1033261
SRR035088.209728
454 Sequencing (SRP001809)
314
390
+
Asp
GTC
[SRA]
>SRA1038534
SRR035090.322459
454 Sequencing (SRP001811)
214
290
+
Asp
GTC
[SRA]
>SRA1054439
SRR035099.133243
454 Sequencing (SRP001820)
192
116
-
Asp
GTC
[SRA]
>SRA1054448
SRR035099.134582
454 Sequencing (SRP001820)
22
98
+
Asp
GTC
[SRA]
>SRA1054556
SRR035099.161489
454 Sequencing (SRP001820)
140
216
+
Asp
GTC
[SRA]
>WENV078109
AAFY01022051
Fossil microbial community from Whale Fall (Santa Cruz Basin)
587
509
-
Asp
GTC
[ENA]
Identical group No.322650 (18 seq.)
>W1711411330
MGSZ01000055
Unclassified
Deltaproteobacteria bacterium RIFOXYC2_FULL_48_10 [MGSZ]
17748
17672
-
Asp
GTC
[ENA]
¡û
>W1711411660
MGTJ01000078
Thermodesulfobacteriota
Desulfobacterales bacterium RIFOXYA12_FULL_46_15 [MGTJ]
5467
5391
-
Asp
GTC
[ENA]
¡û
>W1711411716
MGTL01000051
Thermodesulfobacteriota
Desulfobacula sp. RIFOXYA12_FULL_46_16 [MGTL]
7150
7226
+
Asp
GTC
[ENA]
¡û
>W1711411746
MGTM01000446
Thermodesulfobacteriota
Desulfobacula sp. RIFOXYB2_FULL_45_6 [MGTM]
503
427
-
Asp
GTC
[ENA]
¡û
>WENV183699225
OZSS01016560
[OZSS] metagenome; Seawater sample
627
703
+
Asp
GTC
[ENA]
¢þ
>WENV170408979
CEUI01124448
[CEUI] marine metagenome genome assembly TARA_125_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
51
127
+
Asp
GTC
[ENA]
¢þ
>WENV170571293
FLOH01000120
[FLOH] marine metagenome; water
44071
43995
-
Asp
GTC
[ENA]
¢þ
>WENV170612349
FUWD012585302
[FUWD] metagenome; unknown
301
225
-
Asp
GTC
[ENA]
¢þ
>WENV170642297
JFJP01040159
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
7544
7620
+
Asp
GTC
[ENA]
¢þ
>SRA1036889
SRR035090.32242
454 Sequencing (SRP001811)
297
221
-
Asp
GTC
[SRA]
>SRA1036957
SRR035090.45810
454 Sequencing (SRP001811)
299
223
-
Asp
GTC
[SRA]
>SRA1037957
SRR035090.226397
454 Sequencing (SRP001811)
28
104
+
Asp
GTC
[SRA]
>SRA1038015
SRR035090.233948
454 Sequencing (SRP001811)
28
104
+
Asp
GTC
[SRA]
>SRA1038806
SRR035090.370705
454 Sequencing (SRP001811)
85
9
-
Asp
GTC
[SRA]
>SRA1039214
SRR035090.445807
454 Sequencing (SRP001811)
28
104
+
Asp
GTC
[SRA]
>SRA1039233
SRR035090.448143
454 Sequencing (SRP001811)
28
104
+
Asp
GTC
[SRA]
>SRA1039392
SRR035090.482932
454 Sequencing (SRP001811)
28
104
+
Asp
GTC
[SRA]
>SRA1039875
SRR035090.589533
454 Sequencing (SRP001811)
28
104
+
Asp
GTC
[SRA]
Identical group No.357960 (4 seq.)
>WENV170607782
FUWD010855726
[FUWD] metagenome; unknown
543
617
+
Asp
GTC
[ENA]
¢þ
>SRA1020658
SRR035083.147775
454 Sequencing (SRP001804)
217
291
+
Asp
GTC
[SRA]
>SRA1022266
SRR035083.378746
454 Sequencing (SRP001804)
217
291
+
Asp
GTC
[SRA]
>SRA1039846
SRR035090.582467
454 Sequencing (SRP001811)
120
46
-
Asp
GTC
[SRA]
Identical group No.358339 (2 seq.)
>WENV170612386
FUWD012596408
[FUWD] metagenome; unknown
48
124
+
Asp
GTC
[ENA]
¢þ
>SRA1039448
SRR035090.494712
454 Sequencing (SRP001811)
49
125
+
Asp
GTC
[SRA]
Identical group No.415436 (2 seq.)
>SRA1037349
SRR035090.120420
454 Sequencing (SRP001811)
259
183
-
Asp
GTC
[SRA]
>SRA1037363
SRR035090.122657
454 Sequencing (SRP001811)
252
176
-
Asp
GTC
[SRA]
Identical group No.415469 (1 seq.)
>SRA1038742
SRR035090.357668
454 Sequencing (SRP001811)
27
103
+
Asp
GTC
[SRA]
Identical group No.415494 (1 seq.)
>SRA1039625
SRR035090.532039
454 Sequencing (SRP001811)
117
193
+
Asp
GTC
[SRA]
Identical group No.415500 (1 seq.)
>SRA1039797
SRR035090.572211
454 Sequencing (SRP001811)
177
103
-
Asp
GTC
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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