tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001812)

Anticodon = CGC

HIT: 30 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.234621 (1 seq.)
>SRA1041667 SRR035091.276731 454 Sequencing (SRP001812) 96 175 + Ala CGC [SRA]
Identical group No.358922 (7 seq.)
>WENV170626204 FUWD013216381 [FUWD] metagenome; unknown 2181 2107 - Ala CGC [ENA]
>WENV170628992 FUWD013258120 [FUWD] metagenome; unknown 5007 5081 + Ala CGC [ENA]
>SRA1041049 SRR035091.187698 454 Sequencing (SRP001812) 194 268 + Ala CGC [SRA]
>SRA1041551 SRR035091.259156 454 Sequencing (SRP001812) 505 431 - Ala CGC [SRA]
>SRA1042274 SRR035091.366428 454 Sequencing (SRP001812) 75 149 + Ala CGC [SRA]
>SRA1042384 SRR035091.380207 454 Sequencing (SRP001812) 75 149 + Ala CGC [SRA]
>SRA1042647 SRR035091.423095 454 Sequencing (SRP001812) 103 177 + Ala CGC [SRA]
Identical group No.381186 (1 seq.)
>SRA1040318 SRR035091.77804 454 Sequencing (SRP001812) 397 470 + Ala CGC [SRA]
Identical group No.453809 (3 seq.)
>WENV170612326 FUWD012576585 [FUWD] metagenome; unknown 286 213 - Ala CGC [ENA]
>SRA1036155 SRR035089.457981 454 Sequencing (SRP001810) 286 213 - Ala CGC [SRA]
>SRA1040028 SRR035091.21126 454 Sequencing (SRP001812) 238 311 + Ala CGC [SRA]
Identical group No.484523 (4 seq.)
>WENV170618822 FUWD012988229 [FUWD] metagenome; unknown 221 146 - Ala CGC [ENA]
>SRA1032009 SRR035087.530015 454 Sequencing (SRP001808) 248 323 + Ala CGC [SRA]
>SRA1032942 SRR035088.136288 454 Sequencing (SRP001809) 134 59 - Ala CGC [SRA]
>SRA1041686 SRR035091.278344 454 Sequencing (SRP001812) 38 113 + Ala CGC [SRA]
Identical group No.507156 (10 seq.)
>W1710799454 LJUS01000022 Chloroflexi Anaerolineae bacterium SM23_ 63 (LJUS) 1802 1875 + Ala CGC [ENA]
>WENV180373086 OBOI01194641 [OBOI] sediment metagenome; sediment 78 152 + Ala CGC [ENA]
>WENV181413206 OGCK01039222 [OGCK] hot springs metagenome; hot spring sediment 371 299 - Ala CGC [ENA]
>WENV170692697 LGOV01022988 [LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge 789 862 + Ala CGC [ENA]
>WENV170693518 LGVC01017434 [LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive 1396 1469 + Ala CGC [ENA]
>WENV170694514 LGVD01077633 [LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at 609 536 - Ala CGC [ENA]
>WENV170695537 LGVE01117687 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 487 414 - Ala CGC [ENA]
>WENV170697731 LGVF01184514 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 727 654 - Ala CGC [ENA]
>SRA1040087 SRR035091.36667 454 Sequencing (SRP001812) 253 326 + Ala CGC [SRA]
>W1610663411 LJUS01000022 Chloroflexi Anaerolineae bacterium SM23_ 63 (LJUS) 1802 1875 + Ala CGC [ENA]
Identical group No.548276 (3 seq.)
>WENV170611536 FUWD012342786 [FUWD] metagenome; unknown 251 176 - Ala CGC [ENA]
>SRA1017543 SRR035082.159655 454 Sequencing (SRP001803) 251 176 - Ala CGC [SRA]
>SRA1042248 SRR035091.362128 454 Sequencing (SRP001812) 413 338 - Ala CGC [SRA]
Identical group No.548279 (4 seq.)
>WENV170611564 FUWD012349320 [FUWD] metagenome; unknown 100 172 + Ala CGC [ENA]
>SRA1017938 SRR035082.217238 454 Sequencing (SRP001803) 100 172 + Ala CGC [SRA]
>SRA1041308 SRR035091.226194 454 Sequencing (SRP001812) 55 127 + Ala CGC [SRA]
>SRA1041913 SRR035091.315152 454 Sequencing (SRP001812) 193 265 + Ala CGC [SRA]
Identical group No.548728 (4 seq.)
>WENV170621629 FUWD013066572 [FUWD] metagenome; unknown 540 466 - Ala CGC [ENA]
>WENV170629812 FUWD013282545 [FUWD] metagenome; unknown 540 466 - Ala CGC [ENA]
>SRA1041499 SRR035091.250626 454 Sequencing (SRP001812) 136 210 + Ala CGC [SRA]
>SRA1049029 SRR035094.319301 454 Sequencing (SRP001815) 187 113 - Ala CGC [SRA]
Identical group No.548750 (3 seq.)
>WENV170621809 FUWD013073950 [FUWD] metagenome; unknown 508 433 - Ala CGC [ENA]
>WENV170630005 FUWD013289580 [FUWD] metagenome; unknown 508 433 - Ala CGC [ENA]
>SRA1042868 SRR035091.458093 454 Sequencing (SRP001812) 16 91 + Ala CGC [SRA]
Identical group No.573533 (1 seq.)
>SRA1040822 SRR035091.154148 454 Sequencing (SRP001812) 188 113 - Ala CGC [SRA]
Identical group No.573576 (1 seq.)
>SRA1041262 SRR035091.220865 454 Sequencing (SRP001812) 349 424 + Ala CGC [SRA]
Identical group No.573643 (1 seq.)
>SRA1042190 SRR035091.351747 454 Sequencing (SRP001812) 421 496 + Ala CGC [SRA]
Identical group No.573648 (1 seq.)
>SRA1042260 SRR035091.363893 454 Sequencing (SRP001812) 104 179 + Ala CGC [SRA]
Identical group No.573658 (1 seq.)
>SRA1042327 SRR035091.373305 454 Sequencing (SRP001812) 502 429 - Ala CGC [SRA]
Identical group No.573659 (1 seq.)
>SRA1042344 SRR035091.374977 454 Sequencing (SRP001812) 232 307 + Ala CGC [SRA]
Identical group No.573673 (1 seq.)
>SRA1042505 SRR035091.399423 454 Sequencing (SRP001812) 108 183 + Ala CGC [SRA]
Identical group No.573707 (1 seq.)
>SRA1042869 SRR035091.459072 454 Sequencing (SRP001812) 169 241 + Ala CGC [SRA]
Identical group No.727102 (1 seq.)
>SRA1041877 SRR035091.309001 454 Sequencing (SRP001812) 358 432 + Ala CGC [SRA]
Identical group No.779809 (7 seq.)
>WENV170603388 FUWD010307243 [FUWD] metagenome; unknown 14 84 + Ala CGC [ENA]
>WENV170623043 FUWD013134230 [FUWD] metagenome; unknown 1269 1199 - Ala CGC [ENA]
>WENV170631277 FUWD013347258 [FUWD] metagenome; unknown 1269 1199 - Ala CGC [ENA]
>SRA1017862 SRR035082.207478 454 Sequencing (SRP001803) 377 447 + Ala CGC [SRA]
>SRA1025994 SRR035085.122705 454 Sequencing (SRP001806) 409 339 - Ala CGC [SRA]
>SRA1026209 SRR035085.163020 454 Sequencing (SRP001806) 80 150 + Ala CGC [SRA]
>SRA1041366 SRR035091.233226 454 Sequencing (SRP001812) 29 99 + Ala CGC [SRA]
Identical group No.779952 (8 seq.)
>WENV170626773 FUWD013229382 [FUWD] metagenome; unknown 746 819 + Ala CGC [ENA]
>SRA1036111 SRR035089.447353 454 Sequencing (SRP001810) 283 210 - Ala CGC [SRA]
>SRA1040239 SRR035091.64534 454 Sequencing (SRP001812) 4 77 + Ala CGC [SRA]
>SRA1040424 SRR035091.95740 454 Sequencing (SRP001812) 131 58 - Ala CGC [SRA]
>SRA1040450 SRR035091.99525 454 Sequencing (SRP001812) 361 288 - Ala CGC [SRA]
>SRA1041031 SRR035091.184915 454 Sequencing (SRP001812) 77 4 - Ala CGC [SRA]
>SRA1041256 SRR035091.220456 454 Sequencing (SRP001812) 63 136 + Ala CGC [SRA]
>SRA1041518 SRR035091.254977 454 Sequencing (SRP001812) 215 142 - Ala CGC [SRA]
Identical group No.788143 (4 seq.)
>WENV170623084 FUWD013135838 [FUWD] metagenome; unknown 301 374 + Ala CGC [ENA]
>WENV170631323 FUWD013348695 [FUWD] metagenome; unknown 301 374 + Ala CGC [ENA]
>SRA1031017 SRR035087.360806 454 Sequencing (SRP001808) 213 140 - Ala CGC [SRA]
>SRA1041024 SRR035091.183649 454 Sequencing (SRP001812) 442 369 - Ala CGC [SRA]
Identical group No.805467 (6 seq.)
>WENV170623331 FUWD013145885 [FUWD] metagenome; unknown 1032 959 - Ala CGC [ENA]
>WENV170631594 FUWD013357832 [FUWD] metagenome; unknown 1032 959 - Ala CGC [ENA]
>SRA1041906 SRR035091.314389 454 Sequencing (SRP001812) 56 129 + Ala CGC [SRA]
>SRA1042085 SRR035091.335756 454 Sequencing (SRP001812) 151 224 + Ala CGC [SRA]
>SRA1047899 SRR035094.64167 454 Sequencing (SRP001815) 111 184 + Ala CGC [SRA]
>SRA1048886 SRR035094.274608 454 Sequencing (SRP001815) 112 185 + Ala CGC [SRA]
Identical group No.805477 (7 seq.)
>WENV170623485 FUWD013153003 [FUWD] metagenome; unknown 423 350 - Ala CGC [ENA]
>WENV170631750 FUWD013363890 [FUWD] metagenome; unknown 423 350 - Ala CGC [ENA]
>SRA1018770 SRR035082.345411 454 Sequencing (SRP001803) 123 50 - Ala CGC [SRA]
>SRA1040477 SRR035091.103543 454 Sequencing (SRP001812) 110 183 + Ala CGC [SRA]
>SRA1042435 SRR035091.386284 454 Sequencing (SRP001812) 423 350 - Ala CGC [SRA]
>SRA1042882 SRR035091.460915 454 Sequencing (SRP001812) 423 350 - Ala CGC [SRA]
>SRA1044207 SRR035092.241193 454 Sequencing (SRP001813) 198 125 - Ala CGC [SRA]
Identical group No.805526 (4 seq.)
>WENV170626084 FUWD013213377 [FUWD] metagenome; unknown 1421 1494 + Ala CGC [ENA]
>SRA1032963 SRR035088.140958 454 Sequencing (SRP001809) 261 334 + Ala CGC [SRA]
>SRA1033417 SRR035088.251266 454 Sequencing (SRP001809) 162 89 - Ala CGC [SRA]
>SRA1041858 SRR035091.305733 454 Sequencing (SRP001812) 166 239 + Ala CGC [SRA]
Identical group No.812679 (2 seq.)
>SRA1040058 SRR035091.29440 454 Sequencing (SRP001812) 194 264 + Ala CGC [SRA]
>SRA1041060 SRR035091.189681 454 Sequencing (SRP001812) 192 262 + Ala CGC [SRA]
Identical group No.812685 (2 seq.)
>W1910731886 MHFL01000016 CandidatusOmnitrophica Omnitrophica bacterium RIFCSPLOWO2_01_FULL_45_10 (MHFL) 471 544 + Ala CGC [ENA]
>SRA1040140 SRR035091.46721 454 Sequencing (SRP001812) 199 126 - Ala CGC [SRA]
Identical group No.812703 (1 seq.)
>SRA1040595 SRR035091.120533 454 Sequencing (SRP001812) 132 205 + Ala CGC [SRA]
Identical group No.812759 (2 seq.)
>SRA1017924 SRR035082.215208 454 Sequencing (SRP001803) 325 252 - Ala CGC [SRA]
>SRA1041789 SRR035091.295259 454 Sequencing (SRP001812) 446 373 - Ala CGC [SRA]
Identical group No.812801 (1 seq.)
>SRA1042708 SRR035091.433679 454 Sequencing (SRP001812) 421 494 + Ala CGC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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