tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001812)

Anticodon = CGG

HIT: 20 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.238071 (1 seq.)
>SRA1041404 SRR035091.237743 454 Sequencing (SRP001812) 60 138 + Pro CGG [SRA]
Identical group No.238072 (1 seq.)
>SRA1041488 SRR035091.249259 454 Sequencing (SRP001812) 396 318 - Pro CGG [SRA]
Identical group No.244443 (5 seq.)
>WENV170620944 FUWD013044115 [FUWD] metagenome; unknown 2457 2381 - Pro CGG [ENA]
>WENV170629101 FUWD013261062 [FUWD] metagenome; unknown 2457 2381 - Pro CGG [ENA]
>SRA1029202 SRR035087.91723 454 Sequencing (SRP001808) 365 289 - Pro CGG [SRA]
>SRA1032422 SRR035087.628035 454 Sequencing (SRP001808) 38 114 + Pro CGG [SRA]
>SRA1040411 SRR035091.94186 454 Sequencing (SRP001812) 83 159 + Pro CGG [SRA]
Identical group No.254160 (3 seq.)
>WENV170612530 FUWD012629684 [FUWD] metagenome; unknown 112 189 + Pro CGG [ENA]
>SRA1042254 SRR035091.362884 454 Sequencing (SRP001812) 112 189 + Pro CGG [SRA]
>SRA1042747 SRR035091.440041 454 Sequencing (SRP001812) 112 189 + Pro CGG [SRA]
Identical group No.258050 (1 seq.)
>SRA1041510 SRR035091.252904 454 Sequencing (SRP001812) 336 410 + Pro CGG [SRA]
Identical group No.258059 (1 seq.)
>SRA1042106 SRR035091.339288 454 Sequencing (SRP001812) 193 267 + Pro CGG [SRA]
Identical group No.258073 (1 seq.)
>SRA1042586 SRR035091.412386 454 Sequencing (SRP001812) 351 274 - Pro CGG [SRA]
Identical group No.272683 (4 seq.)
>WENV170612278 FUWD012562149 [FUWD] metagenome; unknown 149 223 + Pro CGG [ENA]
>SRA1033430 SRR035088.255080 454 Sequencing (SRP001809) 268 194 - Pro CGG [SRA]
>SRA1035111 SRR035089.239504 454 Sequencing (SRP001810) 224 298 + Pro CGG [SRA]
>SRA1041819 SRR035091.299530 454 Sequencing (SRP001812) 134 60 - Pro CGG [SRA]
Identical group No.272726 (4 seq.)
>WENV170620518 FUWD013033102 [FUWD] metagenome; unknown 1062 986 - Pro CGG [ENA]
>WENV170628661 FUWD013250548 [FUWD] metagenome; unknown 3946 4022 + Pro CGG [ENA]
>SRA1035361 SRR035089.290474 454 Sequencing (SRP001810) 401 325 - Pro CGG [SRA]
>SRA1041121 SRR035091.200281 454 Sequencing (SRP001812) 280 204 - Pro CGG [SRA]
Identical group No.272887 (7 seq.)
>WENV170605094 FUWD010449019 [FUWD] metagenome; unknown 72 148 + Pro CGG [ENA]
>WENV170619285 FUWD013007945 [FUWD] metagenome; unknown 127 53 - Pro CGG [ENA]
>SRA1030494 SRR035087.287551 454 Sequencing (SRP001808) 354 430 + Pro CGG [SRA]
>SRA1036360 SRR035089.501595 454 Sequencing (SRP001810) 46 122 + Pro CGG [SRA]
>SRA1036635 SRR035089.568580 454 Sequencing (SRP001810) 46 122 + Pro CGG [SRA]
>SRA1040102 SRR035091.38820 454 Sequencing (SRP001812) 147 73 - Pro CGG [SRA]
>SRA1040581 SRR035091.118580 454 Sequencing (SRP001812) 144 68 - Pro CGG [SRA]
Identical group No.334922 (3 seq.)
>WENV170570555 FLOH01000011 [FLOH] marine metagenome; water 464175 464249 + Pro CGG [ENA]
>WENV170572153 FLOH01000566 [FLOH] marine metagenome; water 19898 19824 - Pro CGG [ENA]
>SRA1042099 SRR035091.337546 454 Sequencing (SRP001812) 422 348 - Pro CGG [SRA]
Identical group No.358364 (4 seq.)
>WENV170612549 FUWD012632821 [FUWD] metagenome; unknown 168 92 - Pro CGG [ENA]
>SRA1042604 SRR035091.414725 454 Sequencing (SRP001812) 168 92 - Pro CGG [SRA]
>SRA1050036 SRR035095.179808 454 Sequencing (SRP001816) 68 144 + Pro CGG [SRA]
>SRA1050705 SRR035095.332754 454 Sequencing (SRP001816) 68 144 + Pro CGG [SRA]
Identical group No.381248 (1 seq.)
>SRA1041107 SRR035091.197541 454 Sequencing (SRP001812) 282 206 - Pro CGG [SRA]
Identical group No.381366 (1 seq.)
>SRA1042768 SRR035091.444165 454 Sequencing (SRP001812) 175 251 + Pro CGG [SRA]
Identical group No.548007 (5 seq.)
>WENV170608211 FUWD010902775 [FUWD] metagenome; unknown 493 568 + Pro CGG [ENA]
>SRA1041599 SRR035091.268204 454 Sequencing (SRP001812) 62 135 + Pro CGG [SRA]
>SRA1048284 SRR035094.139102 454 Sequencing (SRP001815) 308 383 + Pro CGG [SRA]
>SRA1049546 SRR035095.94504 454 Sequencing (SRP001816) 227 302 + Pro CGG [SRA]
>SRA1049805 SRR035095.141230 454 Sequencing (SRP001816) 227 302 + Pro CGG [SRA]
Identical group No.654581 (4 seq.)
>WENV170621482 FUWD013060870 [FUWD] metagenome; unknown 1753 1825 + Pro CGG [ENA]
>WENV170629663 FUWD013277094 [FUWD] metagenome; unknown 1753 1825 + Pro CGG [ENA]
>SRA1035928 SRR035089.405409 454 Sequencing (SRP001810) 178 250 + Pro CGG [SRA]
>SRA1042534 SRR035091.404021 454 Sequencing (SRP001812) 90 162 + Pro CGG [SRA]
Identical group No.672628 (5 seq.)
>WENV170600690 FUWD010138174 [FUWD] metagenome; unknown 145 71 - Pro CGG [ENA]
>WENV170626970 FUWD013230564 [FUWD] metagenome; unknown 779 705 - Pro CGG [ENA]
>SRA1019085 SRR035082.399022 454 Sequencing (SRP001803) 354 428 + Pro CGG [SRA]
>SRA1032072 SRR035087.545819 454 Sequencing (SRP001808) 88 162 + Pro CGG [SRA]
>SRA1041523 SRR035091.255387 454 Sequencing (SRP001812) 137 63 - Pro CGG [SRA]
Identical group No.727163 (2 seq.)
>W131193265 ASNW01000012 candidate division OD1 candidate division OD1 bacterium SCGC AB-164-E21 [ASNW] 8929 9002 + Pro CGG [ENA]
>SRA1042714 SRR035091.434759 454 Sequencing (SRP001812) 39 111 + Pro CGG [SRA]
Identical group No.788321 (5 seq.)
>WENV170621375 FUWD013057287 [FUWD] metagenome; unknown 1559 1488 - Pro CGG [ENA]
>WENV170629559 FUWD013273628 [FUWD] metagenome; unknown 1559 1488 - Pro CGG [ENA]
>SRA1028862 SRR035087.25176 454 Sequencing (SRP001808) 258 187 - Pro CGG [SRA]
>SRA1041023 SRR035091.183649 454 Sequencing (SRP001812) 519 448 - Pro CGG [SRA]
>SRA1042152 SRR035091.346301 454 Sequencing (SRP001812) 521 450 - Pro CGG [SRA]
Identical group No.812824 (2 seq.)
>SRA1040490 SRR035091.105423 454 Sequencing (SRP001812) 230 301 + Pro CGG [SRA]
>SRA1040684 SRR035091.132591 454 Sequencing (SRP001812) 234 305 + Pro CGG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK