tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001813)

Anticodon = ACG

HIT: 15 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.256247 (1 seq.)
>SRA1043714 SRR035092.163976 454 Sequencing (SRP001813) 384 461 + Arg ACG [SRA]
Identical group No.256277 (1 seq.)
>SRA1044563 SRR035092.301956 454 Sequencing (SRP001813) 236 310 + Arg ACG [SRA]
Identical group No.282085 (37 seq.)
>C171118945 CP021431 Alphaproteobacteria Yoonia vestfoldensis SMR4r [CP021431] 2354531 2354607 + Arg ACG - ¡û
>W131180859 ARNL01000044 Alphaproteobacteria Yoonia vestfoldensis DSM 16212 [ARNL] 56732 56808 + Arg ACG [ENA] ¡û
>w012757 AAMS01000010 Alphaproteobacteria Yoonia vestfoldensis SKA53 [AAMS] 75899 75821 - Arg ACG [ENA] ¡û
>WENV170022999 BCQK01098961 [BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama 79 3 - Arg ACG [ENA] ¢þ
>WENV170023953 BCQL01011159 [BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa 1111 1187 + Arg ACG [ENA] ¢þ
>WENV170612899 FUWD012736779 [FUWD] metagenome; unknown 175 251 + Arg ACG [ENA] ¢þ
>W09132754 ACOA01000005 Alphaproteobacteria Thalassobium sp. R2A62 R2A62 [ACOA] 698236 698312 + Arg ACG [ENA] ¡û
>W1910285109 FREV01000004 Alphaproteobacteria Loktanella sp. Alg231-35 [FREV] 554699 554775 + Arg ACG [ENA] ¡û
>W1910500549 FXZK01000001 Alphaproteobacteria Flavimaricola marinus CECT 8899 [FXZK] 508051 507975 - Arg ACG [ENA] ¡û
>W1810185221 PKFN01000008 Alphaproteobacteria Yoonia maritima YPC211 [PKFN] 850085 850161 + Arg ACG [ENA] ¡û
>W1810364923 PVTP01000006 Alphaproteobacteria Yoonia maritima DSM 101533 [PVTP] 214028 214104 + Arg ACG [ENA] ¡û
>W1810514034 QBUD01000006 Alphaproteobacteria Yoonia sediminilitoris DSM 29955 [QBUD] 174013 174089 + Arg ACG [ENA] ¡û
>W1810577965 QEOR01000001 Alphaproteobacteria Thalassobacter stenotrophicus LXJ116 [QEOR] 3389302 3389378 + Arg ACG [ENA] ¡û
>W1810658620 QJJL01000001 Alphaproteobacteria Loktanella sp. PT4BL [QJJL] 457071 456995 - Arg ACG [ENA] ¡û
>W1810725088 QOCG01000030 Alphaproteobacteria Loktanella sp. D2R18 [QOCG] 614119 614195 + Arg ACG [ENA] ¡û
>W1810759653 QPJP01000006 Alphaproteobacteria Yoonia sediminilitoris CECT 8284 [QPJP] 174013 174089 + Arg ACG [ENA] ¡û
>SRA1044021 SRR035092.210782 454 Sequencing (SRP001813) 270 194 - Arg ACG [SRA]
>SRA1051475 SRR035098.10835 454 Sequencing (SRP001819) 431 355 - Arg ACG [SRA]
>SRA1051544 SRR035098.25869 454 Sequencing (SRP001819) 175 251 + Arg ACG [SRA]
>SRA1052913 SRR035098.298600 454 Sequencing (SRP001819) 262 338 + Arg ACG [SRA]
>W1511002478 JGVS01000007 Alphaproteobacteria Thalassobacter stenotrophicus 1CONIMAR09 [JGVS] 46214 46290 + Arg ACG [ENA] ¡û
>W1511008145 JHAK01000011 Alphaproteobacteria Thalassobacter sp. 16PALIMAR09 [JHAK] 10211 10135 - Arg ACG [ENA] ¡û
>W1511518675 JXYE01000004 Alphaproteobacteria Loktanella sp. S4079 [JXYE] 196137 196213 + Arg ACG [ENA] ¡û
>W1610092658 CYRX01000009 Alphaproteobacteria Thalassobacter stenotrophicus [CYRX] 212437 212513 + Arg ACG [ENA] ¡û
>W1610628537 LIGP01000004 Alphaproteobacteria Loktanella sp. 1ANDIMAR09 [LIGP] 128372 128296 - Arg ACG [ENA] ¡û
>W1610641267 LJAK01000017 Alphaproteobacteria Loktanella sp. 3ANDIMAR09 [LJAK] 25380 25304 - Arg ACG [ENA] ¡û
>W1610641292 LJAL01000005 Alphaproteobacteria Loktanella sp. 5RATIMAR09 [LJAL] 82417 82341 - Arg ACG [ENA] ¡û
>WENV074403 AACY023973731 Marine microbial communities from Global Ocean Sampling (GOS) 319 397 + Arg ACG [ENA]
>W1710095913 CYRX01000009 Alphaproteobacteria Thalassobacter stenotrophicus [CYRX] 212437 212513 + Arg ACG [ENA] ¡û
>W1710546622 FOCI01000003 Alphaproteobacteria Loktanella fryxellensis [FOCI] 25466 25542 + Arg ACG [ENA] ¡û
>W1710549228 FOEJ01000004 Alphaproteobacteria Loktanella sp. DSM 29012 [FOEJ] 67945 68021 + Arg ACG [ENA] ¡û
>W1710555052 FOIZ01000003 Alphaproteobacteria Cognatiyoonia koreensis [FOIZ] 69592 69668 + Arg ACG [ENA] ¡û
>W1710574897 FOYP01000001 Alphaproteobacteria Yoonia tamlensis [FOYP] 94353 94277 - Arg ACG [ENA] ¡û
>W1710575815 FOZM01000003 Alphaproteobacteria Yoonia litorea [FOZM] 17162 17086 - Arg ACG [ENA] ¡û
>W1710582704 FQUE01000011 Alphaproteobacteria Loktanella atrilutea [FQUE] 37314 37238 - Arg ACG [ENA] ¡û
>W1710587987 FQYZ01000006 Alphaproteobacteria Thalassobacter stenotrophicus DSM 16310 [FQYZ] 193741 193817 + Arg ACG [ENA] ¡û
>W1710600120 FTPR01000003 Alphaproteobacteria Yoonia rosea [FTPR] 132837 132761 - Arg ACG [ENA] ¡û
Identical group No.294515 (7 seq.)
>WENV170017931 BARV01000369 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 388 464 + Arg ACG [ENA] ¢þ
>WENV170018217 BARV01026272 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 106 182 + Arg ACG [ENA] ¢þ
>WENV170612719 FUWD012668715 [FUWD] metagenome; unknown 186 262 + Arg ACG [ENA] ¢þ
>SRA1033884 SRR035088.392387 454 Sequencing (SRP001809) 283 207 - Arg ACG [SRA]
>SRA1044538 SRR035092.295728 454 Sequencing (SRP001813) 103 27 - Arg ACG [SRA]
>SRA1047825 SRR035094.49490 454 Sequencing (SRP001815) 194 270 + Arg ACG [SRA]
>SRA1050166 SRR035095.204168 454 Sequencing (SRP001816) 212 136 - Arg ACG [SRA]
Identical group No.357995 (4 seq.)
>WENV170608143 FUWD010896167 [FUWD] metagenome; unknown 142 66 - Arg ACG [ENA] ¢þ
>SRA1039151 SRR035090.432771 454 Sequencing (SRP001811) 102 178 + Arg ACG [SRA]
>SRA1041927 SRR035091.315944 454 Sequencing (SRP001812) 142 66 - Arg ACG [SRA]
>SRA1044058 SRR035092.215912 454 Sequencing (SRP001813) 82 6 - Arg ACG [SRA]
Identical group No.358317 (2 seq.)
>WENV170612116 FUWD012506214 [FUWD] metagenome; unknown 111 35 - Arg ACG [ENA] ¢þ
>SRA1045108 SRR035092.411879 454 Sequencing (SRP001813) 21 97 + Arg ACG [SRA]
Identical group No.358368 (3 seq.)
>WENV170612571 FUWD012637263 [FUWD] metagenome; unknown 89 165 + Arg ACG [ENA] ¢þ
>SRA1043044 SRR035092.28850 454 Sequencing (SRP001813) 90 166 + Arg ACG [SRA]
>SRA1043144 SRR035092.57828 454 Sequencing (SRP001813) 89 165 + Arg ACG [SRA]
Identical group No.371924 (1 seq.)
>SRA1042998 SRR035092.17975 454 Sequencing (SRP001813) 325 401 + Arg ACG [SRA]
Identical group No.371938 (1 seq.)
>SRA1043146 SRR035092.58616 454 Sequencing (SRP001813) 154 78 - Arg ACG [SRA]
Identical group No.372040 (2 seq.)
>WENV170001147 AGBJ01007554 [AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East 382 456 + Arg ACG [ENA] ¢þ
>SRA1044264 SRR035092.250269 454 Sequencing (SRP001813) 8 84 + Arg ACG [SRA]
Identical group No.372054 (1 seq.)
>SRA1044426 SRR035092.277711 454 Sequencing (SRP001813) 80 4 - Arg ACG [SRA]
Identical group No.372087 (1 seq.)
>SRA1044827 SRR035092.353176 454 Sequencing (SRP001813) 70 146 + Arg ACG [SRA]
Identical group No.372096 (1 seq.)
>SRA1044946 SRR035092.378678 454 Sequencing (SRP001813) 6 82 + Arg ACG [SRA]
Identical group No.562910 (1 seq.)
>SRA1043682 SRR035092.159751 454 Sequencing (SRP001813) 14 89 + Arg ACG [SRA]
Identical group No.563164 (1 seq.)
>SRA1043343 SRR035092.98585 454 Sequencing (SRP001813) 11 83 + Arg ACG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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