tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001813)

Anticodon = GCC

HIT: 33 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.237700 (1 seq.)
>SRA1044940 SRR035092.377109 454 Sequencing (SRP001813) 232 310 + Gly GCC [SRA]
Identical group No.254016 (2 seq.)
>WENV170605143 FUWD010454091 [FUWD] metagenome; unknown 299 222 - Gly GCC [ENA] ¢þ
>SRA1044387 SRR035092.272375 454 Sequencing (SRP001813) 163 86 - Gly GCC [SRA]
Identical group No.256233 (1 seq.)
>SRA1043118 SRR035092.51446 454 Sequencing (SRP001813) 67 142 + Gly GCC [SRA]
Identical group No.300804 (7 seq.)
>WENV170602361 FUWD010230887 [FUWD] metagenome; unknown 555 479 - Gly GCC [ENA] ¢þ
>WENV170626646 FUWD013227776 [FUWD] metagenome; unknown 1056 1132 + Gly GCC [ENA] ¢þ
>SRA1032275 SRR035087.593228 454 Sequencing (SRP001808) 269 193 - Gly GCC [SRA]
>SRA1042046 SRR035091.332345 454 Sequencing (SRP001812) 155 79 - Gly GCC [SRA]
>SRA1043892 SRR035092.191494 454 Sequencing (SRP001813) 112 188 + Gly GCC [SRA]
>SRA1048462 SRR035094.178525 454 Sequencing (SRP001815) 291 215 - Gly GCC [SRA]
>SRA1048970 SRR035094.298967 454 Sequencing (SRP001815) 293 217 - Gly GCC [SRA]
Identical group No.335127 (6 seq.)
>WENV170571791 FLOH01000300 [FLOH] marine metagenome; water 4817 4741 - Gly GCC [ENA] ¢þ
>WENV170612570 FUWD012636901 [FUWD] metagenome; unknown 134 60 - Gly GCC [ENA] ¢þ
>SRA1018622 SRR035082.323928 454 Sequencing (SRP001803) 288 362 + Gly GCC [SRA]
>SRA1042063 SRR035091.333324 454 Sequencing (SRP001812) 140 216 + Gly GCC [SRA]
>SRA1042699 SRR035091.431839 454 Sequencing (SRP001812) 319 243 - Gly GCC [SRA]
>SRA1043023 SRR035092.23431 454 Sequencing (SRP001813) 400 326 - Gly GCC [SRA]
Identical group No.358943 (5 seq.)
>WENV170626733 FUWD013229155 [FUWD] metagenome; unknown 3304 3230 - Gly GCC [ENA] ¢þ
>WENV170629998 FUWD013289331 [FUWD] metagenome; unknown 8608 8534 - Gly GCC [ENA] ¢þ
>SRA1016867 SRR035082.44910 454 Sequencing (SRP001803) 17 91 + Gly GCC [SRA]
>SRA1044357 SRR035092.265662 454 Sequencing (SRP001813) 262 188 - Gly GCC [SRA]
>SRA1049509 SRR035095.87911 454 Sequencing (SRP001816) 339 413 + Gly GCC [SRA]
Identical group No.372068 (1 seq.)
>SRA1044601 SRR035092.308675 454 Sequencing (SRP001813) 370 294 - Gly GCC [SRA]
Identical group No.372078 (1 seq.)
>SRA1044739 SRR035092.331901 454 Sequencing (SRP001813) 301 377 + Gly GCC [SRA]
Identical group No.562822 (1 seq.)
>SRA1043029 SRR035092.24615 454 Sequencing (SRP001813) 51 126 + Gly GCC [SRA]
Identical group No.654398 (11 seq.)
>WENV170601746 FUWD010191354 [FUWD] metagenome; unknown 514 588 + Gly GCC [ENA] ¢þ
>WENV170627294 FUWD013232509 [FUWD] metagenome; unknown 1359 1433 + Gly GCC [ENA] ¢þ
>SRA1017797 SRR035082.197352 454 Sequencing (SRP001803) 88 14 - Gly GCC [SRA]
>SRA1026694 SRR035085.262121 454 Sequencing (SRP001806) 62 136 + Gly GCC [SRA]
>SRA1041884 SRR035091.310269 454 Sequencing (SRP001812) 382 457 + Gly GCC [SRA]
>SRA1042136 SRR035091.344224 454 Sequencing (SRP001812) 20 94 + Gly GCC [SRA]
>SRA1043167 SRR035092.62482 454 Sequencing (SRP001813) 192 266 + Gly GCC [SRA]
>SRA1043832 SRR035092.182353 454 Sequencing (SRP001813) 112 186 + Gly GCC [SRA]
>SRA1044886 SRR035092.366654 454 Sequencing (SRP001813) 288 214 - Gly GCC [SRA]
>SRA1047875 SRR035094.59292 454 Sequencing (SRP001815) 116 42 - Gly GCC [SRA]
>SRA1049449 SRR035095.79463 454 Sequencing (SRP001816) 108 34 - Gly GCC [SRA]
Identical group No.672281 (12 seq.)
>WENV170625552 FUWD013200123 [FUWD] metagenome; unknown 451 377 - Gly GCC [ENA] ¢þ
>WENV170633779 FUWD013402441 [FUWD] metagenome; unknown 451 377 - Gly GCC [ENA] ¢þ
>SRA1017731 SRR035082.186704 454 Sequencing (SRP001803) 90 16 - Gly GCC [SRA]
>SRA1029090 SRR035087.70837 454 Sequencing (SRP001808) 188 116 - Gly GCC [SRA]
>SRA1033800 SRR035088.359336 454 Sequencing (SRP001809) 217 291 + Gly GCC [SRA]
>SRA1040182 SRR035091.54114 454 Sequencing (SRP001812) 26 100 + Gly GCC [SRA]
>SRA1040985 SRR035091.177885 454 Sequencing (SRP001812) 413 339 - Gly GCC [SRA]
>SRA1041307 SRR035091.226191 454 Sequencing (SRP001812) 142 216 + Gly GCC [SRA]
>SRA1042471 SRR035091.393168 454 Sequencing (SRP001812) 114 40 - Gly GCC [SRA]
>SRA1043131 SRR035092.55002 454 Sequencing (SRP001813) 46 120 + Gly GCC [SRA]
>SRA1048789 SRR035094.248842 454 Sequencing (SRP001815) 300 226 - Gly GCC [SRA]
>SRA1049978 SRR035095.171186 454 Sequencing (SRP001816) 213 287 + Gly GCC [SRA]
Identical group No.679438 (7 seq.)
>WENV180251009 OBEQ010331433 [OBEQ] groundwater metagenome; groundwater 167 239 + Gly GCC [ENA] ¢þ
>WENV181190025 OEOF01404329 [OEOF] activated sludge metagenome; Activated Sludge 184 112 - Gly GCC [ENA] ¢þ
>WENV170622860 FUWD013124072 [FUWD] metagenome; unknown 116 190 + Gly GCC [ENA] ¢þ
>WENV170631078 FUWD013337618 [FUWD] metagenome; unknown 116 190 + Gly GCC [ENA] ¢þ
>W1910718187 MFZP01000028 Unclassified Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_39_9 [MFZP] 36704 36776 + Gly GCC [ENA] ¡û
>W1910718566 MGAA01000051 Unclassified Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_FULL_39_8 [MGAA] 1178 1106 - Gly GCC [ENA] ¡û
>SRA1045068 SRR035092.404878 454 Sequencing (SRP001813) 116 190 + Gly GCC [SRA]
Identical group No.710797 (4 seq.)
>WENV170608003 FUWD010881878 [FUWD] metagenome; unknown 93 165 + Gly GCC [ENA] ¢þ
>SRA1016896 SRR035082.49026 454 Sequencing (SRP001803) 114 186 + Gly GCC [SRA]
>SRA1033750 SRR035088.345339 454 Sequencing (SRP001809) 260 332 + Gly GCC [SRA]
>SRA1044323 SRR035092.260062 454 Sequencing (SRP001813) 384 310 - Gly GCC [SRA]
Identical group No.711544 (4 seq.)
>WENV170626461 FUWD013223027 [FUWD] metagenome; unknown 1439 1365 - Gly GCC [ENA] ¢þ
>SRA1042720 SRR035091.435387 454 Sequencing (SRP001812) 208 282 + Gly GCC [SRA]
>SRA1043455 SRR035092.118735 454 Sequencing (SRP001813) 104 178 + Gly GCC [SRA]
>SRA1043527 SRR035092.132247 454 Sequencing (SRP001813) 194 120 - Gly GCC [SRA]
Identical group No.720179 (1 seq.)
>SRA1042963 SRR035092.6422 454 Sequencing (SRP001813) 304 231 - Gly GCC [SRA]
Identical group No.720217 (1 seq.)
>SRA1043314 SRR035092.93872 454 Sequencing (SRP001813) 93 167 + Gly GCC [SRA]
Identical group No.720230 (1 seq.)
>SRA1043479 SRR035092.122196 454 Sequencing (SRP001813) 214 288 + Gly GCC [SRA]
Identical group No.720233 (1 seq.)
>SRA1043546 SRR035092.135982 454 Sequencing (SRP001813) 204 133 - Gly GCC [SRA]
Identical group No.720265 (1 seq.)
>SRA1043821 SRR035092.180539 454 Sequencing (SRP001813) 14 85 + Gly GCC [SRA]
Identical group No.720268 (1 seq.)
>SRA1043881 SRR035092.190220 454 Sequencing (SRP001813) 341 267 - Gly GCC [SRA]
Identical group No.720331 (2 seq.)
>SRA1042865 SRR035091.457737 454 Sequencing (SRP001812) 459 387 - Gly GCC [SRA]
>SRA1044613 SRR035092.309334 454 Sequencing (SRP001813) 78 6 - Gly GCC [SRA]
Identical group No.720348 (1 seq.)
>SRA1044748 SRR035092.333380 454 Sequencing (SRP001813) 273 201 - Gly GCC [SRA]
Identical group No.720352 (1 seq.)
>SRA1044793 SRR035092.346399 454 Sequencing (SRP001813) 265 339 + Gly GCC [SRA]
Identical group No.720354 (1 seq.)
>SRA1044805 SRR035092.348268 454 Sequencing (SRP001813) 283 212 - Gly GCC [SRA]
Identical group No.720389 (1 seq.)
>SRA1045134 SRR035092.418013 454 Sequencing (SRP001813) 193 121 - Gly GCC [SRA]
Identical group No.788305 (7 seq.)
>WENV170625114 FUWD013191672 [FUWD] metagenome; unknown 432 359 - Gly GCC [ENA] ¢þ
>WENV170633371 FUWD013394949 [FUWD] metagenome; unknown 432 359 - Gly GCC [ENA] ¢þ
>SRA1045015 SRR035092.392977 454 Sequencing (SRP001813) 53 126 + Gly GCC [SRA]
>SRA1047144 SRR035093.466281 454 Sequencing (SRP001814) 278 205 - Gly GCC [SRA]
>SRA1051454 SRR035098.4898 454 Sequencing (SRP001819) 339 266 - Gly GCC [SRA]
>SRA1052504 SRR035098.216410 454 Sequencing (SRP001819) 167 94 - Gly GCC [SRA]
>SRA1053697 SRR035098.469559 454 Sequencing (SRP001819) 32 105 + Gly GCC [SRA]
Identical group No.809460 (1 seq.)
>SRA1043187 SRR035092.66250 454 Sequencing (SRP001813) 93 21 - Gly GCC [SRA]
Identical group No.809472 (1 seq.)
>SRA1043425 SRR035092.112544 454 Sequencing (SRP001813) 276 205 - Gly GCC [SRA]
Identical group No.809479 (1 seq.)
>SRA1043551 SRR035092.137078 454 Sequencing (SRP001813) 12 82 + Gly GCC [SRA]
Identical group No.809485 (1 seq.)
>SRA1043627 SRR035092.151363 454 Sequencing (SRP001813) 192 120 - Gly GCC [SRA]
Identical group No.809506 (1 seq.)
>SRA1043935 SRR035092.197708 454 Sequencing (SRP001813) 137 209 + Gly GCC [SRA]
Identical group No.809561 (1 seq.)
>SRA1044956 SRR035092.380738 454 Sequencing (SRP001813) 244 315 + Gly GCC [SRA]
Identical group No.809565 (1 seq.)
>SRA1045019 SRR035092.393744 454 Sequencing (SRP001813) 144 217 + Gly GCC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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