tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001813)

Anticodon = TAC

HIT: 67 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.134832 (1 seq.)
>SRA1044427 SRR035092.277776 454 Sequencing (SRP001813) 45 132 + Val TAC [SRA]
Identical group No.167798 (1 seq.)
>SRA1043504 SRR035092.127872 454 Sequencing (SRP001813) 124 209 + Val TAC [SRA]
Identical group No.234561 (1 seq.)
>SRA1043239 SRR035092.79293 454 Sequencing (SRP001813) 134 54 - Val TAC [SRA]
Identical group No.244493 (6 seq.)
>WENV170605103 FUWD010449388 [FUWD] metagenome; unknown 563 486 - Val TAC [ENA] ¢þ
>WENV170619419 FUWD013013740 [FUWD] metagenome; unknown 254 331 + Val TAC [ENA] ¢þ
>SRA1017024 SRR035082.69750 454 Sequencing (SRP001803) 113 190 + Val TAC [SRA]
>SRA1030568 SRR035087.296978 454 Sequencing (SRP001808) 253 330 + Val TAC [SRA]
>SRA1042395 SRR035091.381369 454 Sequencing (SRP001812) 266 189 - Val TAC [SRA]
>SRA1043959 SRR035092.201837 454 Sequencing (SRP001813) 237 160 - Val TAC [SRA]
Identical group No.256229 (1 seq.)
>SRA1042958 SRR035092.2275 454 Sequencing (SRP001813) 115 38 - Val TAC [SRA]
Identical group No.256231 (1 seq.)
>SRA1043080 SRR035092.39521 454 Sequencing (SRP001813) 287 364 + Val TAC [SRA]
Identical group No.256259 (1 seq.)
>SRA1044031 SRR035092.211738 454 Sequencing (SRP001813) 191 114 - Val TAC [SRA]
Identical group No.272516 (13 seq.)
>WENV170620588 FUWD013034587 [FUWD] metagenome; unknown 1000 924 - Val TAC [ENA] ¢þ
>WENV170626722 FUWD013229103 [FUWD] metagenome; unknown 2197 2121 - Val TAC [ENA] ¢þ
>WENV170628728 FUWD013251961 [FUWD] metagenome; unknown 1000 924 - Val TAC [ENA] ¢þ
>WENV170629212 FUWD013264420 [FUWD] metagenome; unknown 6159 6083 - Val TAC [ENA] ¢þ
>SRA1017262 SRR035082.107261 454 Sequencing (SRP001803) 206 130 - Val TAC [SRA]
>SRA1018773 SRR035082.345574 454 Sequencing (SRP001803) 128 204 + Val TAC [SRA]
>SRA1030071 SRR035087.224304 454 Sequencing (SRP001808) 418 342 - Val TAC [SRA]
>SRA1034243 SRR035089.33842 454 Sequencing (SRP001810) 110 34 - Val TAC [SRA]
>SRA1040002 SRR035091.14592 454 Sequencing (SRP001812) 48 124 + Val TAC [SRA]
>SRA1041571 SRR035091.262568 454 Sequencing (SRP001812) 45 121 + Val TAC [SRA]
>SRA1043861 SRR035092.186949 454 Sequencing (SRP001813) 260 336 + Val TAC [SRA]
>SRA1044122 SRR035092.227343 454 Sequencing (SRP001813) 163 239 + Val TAC [SRA]
>SRA1047750 SRR035094.34837 454 Sequencing (SRP001815) 132 208 + Val TAC [SRA]
Identical group No.272908 (4 seq.)
>WENV170622853 FUWD013123740 [FUWD] metagenome; unknown 310 234 - Val TAC [ENA] ¢þ
>WENV170631071 FUWD013337290 [FUWD] metagenome; unknown 310 234 - Val TAC [ENA] ¢þ
>SRA1036482 SRR035089.531684 454 Sequencing (SRP001810) 207 283 + Val TAC [SRA]
>SRA1043411 SRR035092.110344 454 Sequencing (SRP001813) 247 323 + Val TAC [SRA]
Identical group No.300615 (7 seq.)
>WENV170626459 FUWD013223027 [FUWD] metagenome; unknown 1618 1544 - Val TAC [ENA] ¢þ
>SRA1031088 SRR035087.370843 454 Sequencing (SRP001808) 87 13 - Val TAC [SRA]
>SRA1042107 SRR035091.339606 454 Sequencing (SRP001812) 361 435 + Val TAC [SRA]
>SRA1042457 SRR035091.389146 454 Sequencing (SRP001812) 361 435 + Val TAC [SRA]
>SRA1042718 SRR035091.435387 454 Sequencing (SRP001812) 29 103 + Val TAC [SRA]
>SRA1042778 SRR035091.445109 454 Sequencing (SRP001812) 173 99 - Val TAC [SRA]
>SRA1043525 SRR035092.132247 454 Sequencing (SRP001813) 374 300 - Val TAC [SRA]
Identical group No.357711 (6 seq.)
>WENV170603392 FUWD010307381 [FUWD] metagenome; unknown 131 207 + Val TAC [ENA] ¢þ
>WENV170626111 FUWD013213878 [FUWD] metagenome; unknown 152 226 + Val TAC [ENA] ¢þ
>SRA1017392 SRR035082.131956 454 Sequencing (SRP001803) 298 372 + Val TAC [SRA]
>SRA1018014 SRR035082.227325 454 Sequencing (SRP001803) 236 162 - Val TAC [SRA]
>SRA1019314 SRR035082.434330 454 Sequencing (SRP001803) 305 231 - Val TAC [SRA]
>SRA1043242 SRR035092.80101 454 Sequencing (SRP001813) 131 207 + Val TAC [SRA]
Identical group No.358353 (4 seq.)
>WENV170612454 FUWD012614151 [FUWD] metagenome; unknown 214 138 - Val TAC [ENA] ¢þ
>SRA1040943 SRR035091.171702 454 Sequencing (SRP001812) 263 187 - Val TAC [SRA]
>SRA1044282 SRR035092.252538 454 Sequencing (SRP001813) 207 131 - Val TAC [SRA]
>SRA1050282 SRR035095.229941 454 Sequencing (SRP001816) 218 294 + Val TAC [SRA]
Identical group No.358369 (8 seq.)
>WENV170612574 FUWD012637543 [FUWD] metagenome; unknown 389 313 - Val TAC [ENA] ¢þ
>WENV170627116 FUWD013231467 [FUWD] metagenome; unknown 614 538 - Val TAC [ENA] ¢þ
>WENV170629157 FUWD013262469 [FUWD] metagenome; unknown 7773 7697 - Val TAC [ENA] ¢þ
>SRA1040386 SRR035091.88109 454 Sequencing (SRP001812) 459 383 - Val TAC [SRA]
>SRA1043064 SRR035092.33488 454 Sequencing (SRP001813) 391 315 - Val TAC [SRA]
>SRA1044342 SRR035092.262901 454 Sequencing (SRP001813) 59 135 + Val TAC [SRA]
>SRA1044892 SRR035092.369333 454 Sequencing (SRP001813) 110 34 - Val TAC [SRA]
>SRA1045081 SRR035092.406818 454 Sequencing (SRP001813) 369 445 + Val TAC [SRA]
Identical group No.358402 (4 seq.)
>WENV170612796 FUWD012691197 [FUWD] metagenome; unknown 84 160 + Val TAC [ENA] ¢þ
>SRA1044889 SRR035092.367338 454 Sequencing (SRP001813) 230 154 - Val TAC [SRA]
>SRA1049508 SRR035095.87911 454 Sequencing (SRP001816) 94 170 + Val TAC [SRA]
>SRA1049990 SRR035095.172316 454 Sequencing (SRP001816) 94 170 + Val TAC [SRA]
Identical group No.358444 (2 seq.)
>WENV170613137 FUWD012782139 [FUWD] metagenome; unknown 717 643 - Val TAC [ENA] ¢þ
>SRA1043651 SRR035092.155248 454 Sequencing (SRP001813) 137 63 - Val TAC [SRA]
Identical group No.358746 (3 seq.)
>WENV170622273 FUWD013095498 [FUWD] metagenome; unknown 1820 1896 + Val TAC [ENA] ¢þ
>WENV170630493 FUWD013310205 [FUWD] metagenome; unknown 1820 1896 + Val TAC [ENA] ¢þ
>SRA1044920 SRR035092.373077 454 Sequencing (SRP001813) 171 247 + Val TAC [SRA]
Identical group No.358765 (6 seq.)
>WENV170622499 FUWD013107285 [FUWD] metagenome; unknown 1202 1276 + Val TAC [ENA] ¢þ
>WENV170630723 FUWD013321613 [FUWD] metagenome; unknown 1202 1276 + Val TAC [ENA] ¢þ
>SRA1041492 SRR035091.249690 454 Sequencing (SRP001812) 72 146 + Val TAC [SRA]
>SRA1043560 SRR035092.138253 454 Sequencing (SRP001813) 397 471 + Val TAC [SRA]
>SRA1047635 SRR035094.473 454 Sequencing (SRP001815) 41 115 + Val TAC [SRA]
>SRA1047640 SRR035094.3810 454 Sequencing (SRP001815) 42 116 + Val TAC [SRA]
Identical group No.358766 (6 seq.)
>WENV170622503 FUWD013107458 [FUWD] metagenome; unknown 1344 1268 - Val TAC [ENA] ¢þ
>WENV170630728 FUWD013321778 [FUWD] metagenome; unknown 1344 1268 - Val TAC [ENA] ¢þ
>SRA1033423 SRR035088.253420 454 Sequencing (SRP001809) 10 86 + Val TAC [SRA]
>SRA1040237 SRR035091.64529 454 Sequencing (SRP001812) 98 174 + Val TAC [SRA]
>SRA1043127 SRR035092.54654 454 Sequencing (SRP001813) 148 224 + Val TAC [SRA]
>SRA1044134 SRR035092.229523 454 Sequencing (SRP001813) 19 95 + Val TAC [SRA]
Identical group No.371926 (1 seq.)
>SRA1043048 SRR035092.30175 454 Sequencing (SRP001813) 96 172 + Val TAC [SRA]
Identical group No.371932 (1 seq.)
>SRA1043105 SRR035092.47958 454 Sequencing (SRP001813) 479 403 - Val TAC [SRA]
Identical group No.371934 (1 seq.)
>SRA1043110 SRR035092.49709 454 Sequencing (SRP001813) 372 298 - Val TAC [SRA]
Identical group No.371953 (1 seq.)
>SRA1043293 SRR035092.90724 454 Sequencing (SRP001813) 159 84 - Val TAC [SRA]
Identical group No.371996 (1 seq.)
>SRA1043746 SRR035092.169229 454 Sequencing (SRP001813) 439 363 - Val TAC [SRA]
Identical group No.372007 (1 seq.)
>SRA1043825 SRR035092.180865 454 Sequencing (SRP001813) 98 174 + Val TAC [SRA]
Identical group No.372008 (1 seq.)
>SRA1043845 SRR035092.185320 454 Sequencing (SRP001813) 414 340 - Val TAC [SRA]
Identical group No.372013 (2 seq.)
>SRA1041621 SRR035091.270262 454 Sequencing (SRP001812) 551 475 - Val TAC [SRA]
>SRA1043963 SRR035092.201850 454 Sequencing (SRP001813) 265 341 + Val TAC [SRA]
Identical group No.372018 (1 seq.)
>SRA1044005 SRR035092.209093 454 Sequencing (SRP001813) 59 135 + Val TAC [SRA]
Identical group No.372023 (1 seq.)
>SRA1044082 SRR035092.221292 454 Sequencing (SRP001813) 301 374 + Val TAC [SRA]
Identical group No.372028 (1 seq.)
>SRA1044151 SRR035092.231814 454 Sequencing (SRP001813) 6 79 + Val TAC [SRA]
Identical group No.372066 (1 seq.)
>SRA1044590 SRR035092.307019 454 Sequencing (SRP001813) 189 116 - Val TAC [SRA]
Identical group No.372069 (1 seq.)
>SRA1044602 SRR035092.308675 454 Sequencing (SRP001813) 282 206 - Val TAC [SRA]
Identical group No.372071 (1 seq.)
>SRA1044625 SRR035092.312639 454 Sequencing (SRP001813) 104 28 - Val TAC [SRA]
Identical group No.372088 (1 seq.)
>SRA1044829 SRR035092.353179 454 Sequencing (SRP001813) 256 180 - Val TAC [SRA]
Identical group No.372090 (1 seq.)
>SRA1044851 SRR035092.357460 454 Sequencing (SRP001813) 79 155 + Val TAC [SRA]
Identical group No.372101 (1 seq.)
>SRA1044964 SRR035092.381379 454 Sequencing (SRP001813) 306 382 + Val TAC [SRA]
Identical group No.372111 (1 seq.)
>SRA1045051 SRR035092.400195 454 Sequencing (SRP001813) 10 86 + Val TAC [SRA]
Identical group No.372113 (1 seq.)
>SRA1045059 SRR035092.401295 454 Sequencing (SRP001813) 97 171 + Val TAC [SRA]
Identical group No.372243 (1 seq.)
>SRA1044237 SRR035092.246485 454 Sequencing (SRP001813) 145 72 - Val TAC [SRA]
Identical group No.487755 (4 seq.)
>WENV180256125 OBEQ010788375 [OBEQ] groundwater metagenome; groundwater 288 363 + Val TAC [ENA] ¢þ
>WENV170558032 CXWL01046998 [CXWL] groundwater metagenome; biofilm material 1088 1013 - Val TAC [ENA] ¢þ
>WENV170714288 LNFM01065542 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 74 1 - Val TAC [ENA] ¢þ
>SRA1044687 SRR035092.322662 454 Sequencing (SRP001813) 382 307 - Val TAC [SRA]
Identical group No.547537 (5 seq.)
>WENV170600381 FUWD010122759 [FUWD] metagenome; unknown 426 351 - Val TAC [ENA] ¢þ
>WENV170626272 FUWD013217947 [FUWD] metagenome; unknown 228 153 - Val TAC [ENA] ¢þ
>SRA1044742 SRR035092.332680 454 Sequencing (SRP001813) 147 72 - Val TAC [SRA]
>SRA1049276 SRR035095.48985 454 Sequencing (SRP001816) 381 456 + Val TAC [SRA]
>SRA1049308 SRR035095.54583 454 Sequencing (SRP001816) 380 455 + Val TAC [SRA]
Identical group No.547688 (3 seq.)
>WENV170603272 FUWD010297995 [FUWD] metagenome; unknown 783 710 - Val TAC [ENA] ¢þ
>SRA1017451 SRR035082.141756 454 Sequencing (SRP001803) 282 209 - Val TAC [SRA]
>SRA1044465 SRR035092.285319 454 Sequencing (SRP001813) 425 352 - Val TAC [SRA]
Identical group No.562860 (2 seq.)
>SRA1043307 SRR035092.93037 454 Sequencing (SRP001813) 264 189 - Val TAC [SRA]
>SRA1044034 SRR035092.211879 454 Sequencing (SRP001813) 118 43 - Val TAC [SRA]
Identical group No.562903 (1 seq.)
>SRA1043642 SRR035092.154358 454 Sequencing (SRP001813) 160 235 + Val TAC [SRA]
Identical group No.562912 (1 seq.)
>SRA1043689 SRR035092.161105 454 Sequencing (SRP001813) 134 208 + Val TAC [SRA]
Identical group No.563025 (1 seq.)
>SRA1044842 SRR035092.355745 454 Sequencing (SRP001813) 306 231 - Val TAC [SRA]
Identical group No.563027 (1 seq.)
>SRA1044857 SRR035092.359504 454 Sequencing (SRP001813) 196 121 - Val TAC [SRA]
Identical group No.563032 (5 seq.)
>C017960 BX908798 Chlamydiota Candidatus Protochlamydia amoebophila UWE25 [BX908798] 958190 958118 - Val TAC [Ensembl] ¡û
>W141229887 BASL01000690 Chlamydiota Candidatus Protochlamydia sp. R18 [BASL] 14292 14220 - Val TAC [ENA] ¡û
>SRA1044931 SRR035092.374790 454 Sequencing (SRP001813) 255 183 - Val TAC [SRA]
>W1511360599 JSAN01000057 Chlamydiota Candidatus Protochlamydia amoebophila amoebophila EI2 [JSAN] 10537 10465 - Val TAC [ENA] ¡û
>W1710064148 BCPZ01000243 Chlamydiota Candidatus Protochlamydia sp. W-9 [BCPZ] 9701 9629 - Val TAC [ENA] ¡û
Identical group No.563049 (1 seq.)
>SRA1045098 SRR035092.410215 454 Sequencing (SRP001813) 184 109 - Val TAC [SRA]
Identical group No.654602 (10 seq.)
>WENV170624225 FUWD013178071 [FUWD] metagenome; unknown 2951 2880 - Val TAC [ENA] ¢þ
>WENV170632507 FUWD013383688 [FUWD] metagenome; unknown 2951 2880 - Val TAC [ENA] ¢þ
>SRA1033004 SRR035088.150470 454 Sequencing (SRP001809) 170 241 + Val TAC [SRA]
>SRA1033661 SRR035088.317135 454 Sequencing (SRP001809) 207 136 - Val TAC [SRA]
>SRA1036194 SRR035089.467073 454 Sequencing (SRP001810) 245 174 - Val TAC [SRA]
>SRA1040519 SRR035091.109421 454 Sequencing (SRP001812) 126 197 + Val TAC [SRA]
>SRA1041240 SRR035091.219125 454 Sequencing (SRP001812) 35 106 + Val TAC [SRA]
>SRA1041407 SRR035091.237910 454 Sequencing (SRP001812) 125 196 + Val TAC [SRA]
>SRA1043835 SRR035092.183715 454 Sequencing (SRP001813) 322 393 + Val TAC [SRA]
>SRA1043980 SRR035092.205380 454 Sequencing (SRP001813) 245 174 - Val TAC [SRA]
Identical group No.710791 (2 seq.)
>WENV170607914 FUWD010870982 [FUWD] metagenome; unknown 86 15 - Val TAC [ENA] ¢þ
>SRA1045027 SRR035092.395355 454 Sequencing (SRP001813) 284 213 - Val TAC [SRA]
Identical group No.720195 (1 seq.)
>SRA1043071 SRR035092.36191 454 Sequencing (SRP001813) 21 95 + Val TAC [SRA]
Identical group No.720206 (1 seq.)
>SRA1043217 SRR035092.75116 454 Sequencing (SRP001813) 137 65 - Val TAC [SRA]
Identical group No.720251 (1 seq.)
>SRA1043679 SRR035092.158890 454 Sequencing (SRP001813) 352 278 - Val TAC [SRA]
Identical group No.788154 (6 seq.)
>WENV170626960 FUWD013230555 [FUWD] metagenome; unknown 8692 8765 + Val TAC [ENA] ¢þ
>WENV170634175 FUWD013411752 [FUWD] metagenome; unknown 13113 13186 + Val TAC [ENA] ¢þ
>SRA1019118 SRR035082.405122 454 Sequencing (SRP001803) 114 187 + Val TAC [SRA]
>SRA1019642 SRR035082.494072 454 Sequencing (SRP001803) 73 1 - Val TAC [SRA]
>SRA1031129 SRR035087.378253 454 Sequencing (SRP001808) 340 413 + Val TAC [SRA]
>SRA1043961 SRR035092.201843 454 Sequencing (SRP001813) 96 23 - Val TAC [SRA]
Identical group No.788231 (12 seq.)
>WENV170617942 FUWD012944772 [FUWD] metagenome; unknown 531 461 - Val TAC [ENA] ¢þ
>WENV170625608 FUWD013201698 [FUWD] metagenome; unknown 271 201 - Val TAC [ENA] ¢þ
>SRA1017925 SRR035082.215257 454 Sequencing (SRP001803) 93 23 - Val TAC [SRA]
>SRA1032256 SRR035087.588772 454 Sequencing (SRP001808) 274 204 - Val TAC [SRA]
>SRA1043099 SRR035092.46693 454 Sequencing (SRP001813) 238 168 - Val TAC [SRA]
>SRA1043448 SRR035092.116719 454 Sequencing (SRP001813) 219 289 + Val TAC [SRA]
>SRA1043667 SRR035092.156930 454 Sequencing (SRP001813) 137 67 - Val TAC [SRA]
>SRA1043925 SRR035092.195280 454 Sequencing (SRP001813) 373 443 + Val TAC [SRA]
>SRA1047941 SRR035094.72011 454 Sequencing (SRP001815) 154 224 + Val TAC [SRA]
>SRA1048812 SRR035094.254991 454 Sequencing (SRP001815) 62 132 + Val TAC [SRA]
>SRA1048987 SRR035094.304239 454 Sequencing (SRP001815) 140 210 + Val TAC [SRA]
>SRA1049024 SRR035094.317896 454 Sequencing (SRP001815) 140 210 + Val TAC [SRA]
Identical group No.797916 (4 seq.)
>WENV170214867 CEPX01114203 [CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2807 2737 - Val TAC [ENA] ¢þ
>WENV170219182 CEPZ01046983 [CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1625 1555 - Val TAC [ENA] ¢þ
>SRA1043112 SRR035092.49968 454 Sequencing (SRP001813) 197 127 - Val TAC [SRA]
>SRA1043990 SRR035092.207107 454 Sequencing (SRP001813) 198 128 - Val TAC [SRA]
Identical group No.805281 (3 seq.)
>WENV170612577 FUWD012637678 [FUWD] metagenome; unknown 350 420 + Val TAC [ENA] ¢þ
>SRA1043067 SRR035092.35405 454 Sequencing (SRP001813) 350 420 + Val TAC [SRA]
>SRA1043951 SRR035092.200298 454 Sequencing (SRP001813) 353 426 + Val TAC [SRA]
Identical group No.805282 (2 seq.)
>WENV170612578 FUWD012638185 [FUWD] metagenome; unknown 183 257 + Val TAC [ENA] ¢þ
>SRA1043088 SRR035092.43446 454 Sequencing (SRP001813) 182 256 + Val TAC [SRA]
Identical group No.809450 (1 seq.)
>SRA1042975 SRR035092.10342 454 Sequencing (SRP001813) 185 257 + Val TAC [SRA]
Identical group No.809513 (1 seq.)
>SRA1044080 SRR035092.221275 454 Sequencing (SRP001813) 214 140 - Val TAC [SRA]
Identical group No.809519 (1 seq.)
>SRA1044192 SRR035092.239130 454 Sequencing (SRP001813) 219 146 - Val TAC [SRA]
Identical group No.809521 (1 seq.)
>SRA1044214 SRR035092.243282 454 Sequencing (SRP001813) 13 85 + Val TAC [SRA]
Identical group No.809530 (1 seq.)
>SRA1044417 SRR035092.276480 454 Sequencing (SRP001813) 161 234 + Val TAC [SRA]
Identical group No.809543 (1 seq.)
>SRA1044670 SRR035092.320087 454 Sequencing (SRP001813) 274 200 - Val TAC [SRA]
Identical group No.809560 (1 seq.)
>SRA1044928 SRR035092.374452 454 Sequencing (SRP001813) 141 211 + Val TAC [SRA]
Identical group No.809616 (1 seq.)
>SRA1043388 SRR035092.106486 454 Sequencing (SRP001813) 421 349 - Val TAC [SRA]
Identical group No.809619 (1 seq.)
>SRA1043598 SRR035092.146224 454 Sequencing (SRP001813) 285 215 - Val TAC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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