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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
454 Sequencing (SRP001814)
Anticodon = CGC
HIT:
3 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.453583 (163 seq.)
>W1710859007
LMBR01000173
Chlorobiota
Chlorobium limicola [LMBR]
3132
3057
-
Ala
CGC
[ENA]
¡û
>W1711136088
LUZT01000012
Chlorobiota
Chlorobiales bacterium Clorobi_01 [LUZT]
18358
18283
-
Ala
CGC
[ENA]
¡û
>W1711167298
LVWG01000017
Chlorobiota
Pelodictyon luteolum [LVWG]
76828
76755
-
Ala
CGC
[ENA]
¡û
>W1711626081
MPJE01000051
Chlorobiota
Chlorobium sp. KB01 [MPJE]
22842
22915
+
Ala
CGC
[ENA]
¡û
>C171049461
CP016432
Chlorobiota
Prosthecochloris sp. CIB 2401 [CP016432]
2361896
2361821
-
Ala
CGC
-
¡û
>C171060570
CP017305
Chlorobiota
Chlorobaculum limnaeum DSM 1677 [CP017305]
2727344
2727269
-
Ala
CGC
-
¡û
>C005283
CP000108
Chlorobiota
Chlorobium chlorochromatii [CP000108]
75584
75656
+
Ala
CGC
[Ensembl]
¡û
>C006599
CP000492
Chlorobiota
Chlorobium phaeobacteroides DSM 266 [CP000492]
3098150
3098078
-
Ala
CGC
[Ensembl]
¡û
>C007050
AE006470
Chlorobiota
Chlorobaculum tepidum TLS [AE006470]
16877
16802
-
Ala
CGC
[Ensembl]
¡û
>C016749
CP000096
Chlorobiota
Pelodictyon luteolum DSM 273 [CP000096]
2328009
2327937
-
Ala
CGC
[Ensembl]
¡û
>C018254
CP000607
Chlorobiota
Chlorobium phaeovibrioides [CP000607]
1933637
1933562
-
Ala
CGC
[Ensembl]
¡û
>w018052
AASE01000023
Chlorobiota
Chlorobium ferrooxidans DSM 13031 [AASE]
33218
33295
+
Ala
CGC
[ENA]
¡û
>w007184
AAIK01000005
Chlorobiota
Pelodictyon phaeoclathratiforme BU-1 [AAIK]
97318
97246
-
Ala
CGC
[ENA]
¡û
>w007169
AAIJ01000010
Chlorobiota
Prosthecochloris aestuarii DSM 271 [AAIJ]
42123
42200
+
Ala
CGC
[ENA]
¡û
>w006942
AAIC01000001
Chlorobiota
Chlorobium phaeobacteroides BS1 [AAIC]
123458
123533
+
Ala
CGC
[ENA]
¡û
>WENV181232309
OFEN01000013
[OFEN] coral metagenome; NA
8666
8593
-
Ala
CGC
[ENA]
¢þ
>WENV181232348
OFEN01000104
[OFEN] coral metagenome; NA
816
889
+
Ala
CGC
[ENA]
¢þ
>WENV181233239
OFES01000025
[OFES] coral metagenome; NA
13736
13663
-
Ala
CGC
[ENA]
¢þ
>WENV181303850
OFHR01000008
[OFHR] coral metagenome; NA
72460
72533
+
Ala
CGC
[ENA]
¢þ
>WENV181303876
OFHR01000303
[OFHR] coral metagenome; NA
1538
1611
+
Ala
CGC
[ENA]
¢þ
>C08003507
CP001097
Chlorobiota
Chlorobium limicola DSM 245 [CP001097]
2728200
2728125
-
Ala
CGC
[Ensembl]
¡û
>C08003651
CP001101
Chlorobiota
Chlorobium phaeobacteroides [CP001101]
2671394
2671319
-
Ala
CGC
[Ensembl]
¡û
>C08003604
CP001099
Chlorobiota
Chlorobaculum parvum NCIB 8327 [CP001099]
2251634
2251559
-
Ala
CGC
[Ensembl]
¡û
>C08003801
CP001100
Chlorobiota
Chloroherpeton thalassium ATCC 35110 [CP001100]
1613486
1613559
+
Ala
CGC
[Ensembl]
¡û
>C08007707
CP001110
Chlorobiota
Pelodictyon phaeoclathratiforme BU-1 [CP001110]
2967188
2967113
-
Ala
CGC
[Ensembl]
¡û
>C08007172
CP001108
Chlorobiota
Prosthecochloris aestuarii DSM 271 [CP001108]
2423600
2423527
-
Ala
CGC
[Ensembl]
¡û
>WENV183812098
PYLN01000013
[PYLN] freshwater metagenome; meromictic lake
1040
966
-
Ala
CGC
[ENA]
¢þ
>WENV170613532
FUWD012813000
[FUWD] metagenome; unknown
45846
45773
-
Ala
CGC
[ENA]
¢þ
>WENV170614006
FUWD012823491
[FUWD] metagenome; unknown
76881
76808
-
Ala
CGC
[ENA]
¢þ
>WENV170619870
FUWD013022393
[FUWD] metagenome; unknown
6545
6620
+
Ala
CGC
[ENA]
¢þ
>WENV170619933
FUWD013023096
[FUWD] metagenome; unknown
7414
7339
-
Ala
CGC
[ENA]
¢þ
>WENV170627990
FUWD013240551
[FUWD] metagenome; unknown
6545
6620
+
Ala
CGC
[ENA]
¢þ
>WENV170628056
FUWD013241198
[FUWD] metagenome; unknown
7414
7339
-
Ala
CGC
[ENA]
¢þ
>C181068787
CP022571
Chlorobiota
Prosthecochloris sp. GSB1 TY Vent [CP022571]
2423986
2423913
-
Ala
CGC
-
¡û
>W09102639
AAIB01000003
Chlorobiota
Chlorobium phaeobacteroides DSM 266 [AAIB]
45512
45439
-
Ala
CGC
[ENA]
¡û
>W09103345
AAJD01000003
Chlorobiota
Chlorobium phaeovibrioides DSM 265 [AAJD]
66326
66401
+
Ala
CGC
[ENA]
¡û
>W1810062160
PDNX01000007
Chlorobiota
Prosthecochloris sp. ZM [PDNX]
13546
13619
+
Ala
CGC
[ENA]
¡û
>W1810062250
PDNY01000063
Chlorobiota
Prosthecochloris sp. ZM_2 [PDNY]
3439
3512
+
Ala
CGC
[ENA]
¡û
>W1810062292
PDNZ01000008
Chlorobiota
Prosthecochloris marina V1 [PDNZ]
13816
13741
-
Ala
CGC
[ENA]
¡û
>SRA1017657
SRR035082.176058
454 Sequencing (SRP001803)
364
291
-
Ala
CGC
[SRA]
>SRA1019915
SRR035083.20818
454 Sequencing (SRP001804)
260
187
-
Ala
CGC
[SRA]
>SRA1019973
SRR035083.33052
454 Sequencing (SRP001804)
173
100
-
Ala
CGC
[SRA]
>SRA1019983
SRR035083.36548
454 Sequencing (SRP001804)
407
334
-
Ala
CGC
[SRA]
>SRA1020033
SRR035083.44763
454 Sequencing (SRP001804)
409
336
-
Ala
CGC
[SRA]
>SRA1020171
SRR035083.66051
454 Sequencing (SRP001804)
415
342
-
Ala
CGC
[SRA]
>SRA1020191
SRR035083.71157
454 Sequencing (SRP001804)
232
159
-
Ala
CGC
[SRA]
>SRA1020195
SRR035083.71815
454 Sequencing (SRP001804)
231
158
-
Ala
CGC
[SRA]
>SRA1020337
SRR035083.98455
454 Sequencing (SRP001804)
91
18
-
Ala
CGC
[SRA]
>SRA1020411
SRR035083.110922
454 Sequencing (SRP001804)
355
428
+
Ala
CGC
[SRA]
>SRA1020427
SRR035083.113444
454 Sequencing (SRP001804)
396
323
-
Ala
CGC
[SRA]
>SRA1020442
SRR035083.116165
454 Sequencing (SRP001804)
161
88
-
Ala
CGC
[SRA]
>SRA1020583
SRR035083.138027
454 Sequencing (SRP001804)
161
88
-
Ala
CGC
[SRA]
>SRA1020594
SRR035083.138754
454 Sequencing (SRP001804)
353
426
+
Ala
CGC
[SRA]
>SRA1020617
SRR035083.141262
454 Sequencing (SRP001804)
225
298
+
Ala
CGC
[SRA]
>SRA1020645
SRR035083.145960
454 Sequencing (SRP001804)
357
284
-
Ala
CGC
[SRA]
>SRA1020701
SRR035083.153765
454 Sequencing (SRP001804)
287
360
+
Ala
CGC
[SRA]
>SRA1020737
SRR035083.157604
454 Sequencing (SRP001804)
161
88
-
Ala
CGC
[SRA]
>SRA1020847
SRR035083.172645
454 Sequencing (SRP001804)
354
427
+
Ala
CGC
[SRA]
>SRA1020930
SRR035083.186849
454 Sequencing (SRP001804)
432
359
-
Ala
CGC
[SRA]
>SRA1020931
SRR035083.186926
454 Sequencing (SRP001804)
91
18
-
Ala
CGC
[SRA]
>SRA1020937
SRR035083.187929
454 Sequencing (SRP001804)
353
280
-
Ala
CGC
[SRA]
>SRA1020952
SRR035083.189673
454 Sequencing (SRP001804)
368
295
-
Ala
CGC
[SRA]
>SRA1020989
SRR035083.194011
454 Sequencing (SRP001804)
366
439
+
Ala
CGC
[SRA]
>SRA1021011
SRR035083.197487
454 Sequencing (SRP001804)
226
299
+
Ala
CGC
[SRA]
>SRA1021141
SRR035083.213877
454 Sequencing (SRP001804)
90
17
-
Ala
CGC
[SRA]
>SRA1021250
SRR035083.228714
454 Sequencing (SRP001804)
468
395
-
Ala
CGC
[SRA]
>SRA1021309
SRR035083.239750
454 Sequencing (SRP001804)
367
294
-
Ala
CGC
[SRA]
>SRA1021323
SRR035083.242078
454 Sequencing (SRP001804)
91
18
-
Ala
CGC
[SRA]
>SRA1021372
SRR035083.251973
454 Sequencing (SRP001804)
345
418
+
Ala
CGC
[SRA]
>SRA1021428
SRR035083.257170
454 Sequencing (SRP001804)
121
48
-
Ala
CGC
[SRA]
>SRA1021476
SRR035083.263593
454 Sequencing (SRP001804)
219
146
-
Ala
CGC
[SRA]
>SRA1021517
SRR035083.268499
454 Sequencing (SRP001804)
93
166
+
Ala
CGC
[SRA]
>SRA1021540
SRR035083.270836
454 Sequencing (SRP001804)
147
220
+
Ala
CGC
[SRA]
>SRA1021591
SRR035083.277054
454 Sequencing (SRP001804)
346
419
+
Ala
CGC
[SRA]
>SRA1021646
SRR035083.286908
454 Sequencing (SRP001804)
140
67
-
Ala
CGC
[SRA]
>SRA1021747
SRR035083.301374
454 Sequencing (SRP001804)
219
146
-
Ala
CGC
[SRA]
>SRA1021787
SRR035083.309052
454 Sequencing (SRP001804)
92
165
+
Ala
CGC
[SRA]
>SRA1021850
SRR035083.317518
454 Sequencing (SRP001804)
91
18
-
Ala
CGC
[SRA]
>SRA1021926
SRR035083.328684
454 Sequencing (SRP001804)
356
429
+
Ala
CGC
[SRA]
>SRA1021951
SRR035083.331434
454 Sequencing (SRP001804)
7
80
+
Ala
CGC
[SRA]
>SRA1021980
SRR035083.334108
454 Sequencing (SRP001804)
368
295
-
Ala
CGC
[SRA]
>SRA1022092
SRR035083.351709
454 Sequencing (SRP001804)
93
166
+
Ala
CGC
[SRA]
>SRA1022109
SRR035083.354792
454 Sequencing (SRP001804)
355
428
+
Ala
CGC
[SRA]
>SRA1022159
SRR035083.360933
454 Sequencing (SRP001804)
96
23
-
Ala
CGC
[SRA]
>SRA1022222
SRR035083.370023
454 Sequencing (SRP001804)
90
17
-
Ala
CGC
[SRA]
>SRA1022284
SRR035083.381327
454 Sequencing (SRP001804)
91
18
-
Ala
CGC
[SRA]
>SRA1022400
SRR035083.400613
454 Sequencing (SRP001804)
354
427
+
Ala
CGC
[SRA]
>SRA1022643
SRR035083.436362
454 Sequencing (SRP001804)
349
422
+
Ala
CGC
[SRA]
>SRA1022669
SRR035083.439806
454 Sequencing (SRP001804)
188
115
-
Ala
CGC
[SRA]
>SRA1022737
SRR035083.451402
454 Sequencing (SRP001804)
318
245
-
Ala
CGC
[SRA]
>SRA1022760
SRR035083.455055
454 Sequencing (SRP001804)
419
346
-
Ala
CGC
[SRA]
>SRA1022862
SRR035083.475089
454 Sequencing (SRP001804)
22
95
+
Ala
CGC
[SRA]
>SRA1022926
SRR035083.488533
454 Sequencing (SRP001804)
190
117
-
Ala
CGC
[SRA]
>SRA1023014
SRR035083.504612
454 Sequencing (SRP001804)
189
116
-
Ala
CGC
[SRA]
>SRA1023037
SRR035083.510028
454 Sequencing (SRP001804)
317
244
-
Ala
CGC
[SRA]
>SRA1023040
SRR035083.510725
454 Sequencing (SRP001804)
96
23
-
Ala
CGC
[SRA]
>SRA1030396
SRR035087.274346
454 Sequencing (SRP001808)
474
401
-
Ala
CGC
[SRA]
>SRA1032641
SRR035088.70061
454 Sequencing (SRP001809)
211
138
-
Ala
CGC
[SRA]
>SRA1032710
SRR035088.85309
454 Sequencing (SRP001809)
199
272
+
Ala
CGC
[SRA]
>SRA1032780
SRR035088.102307
454 Sequencing (SRP001809)
144
217
+
Ala
CGC
[SRA]
>SRA1033092
SRR035088.171211
454 Sequencing (SRP001809)
246
173
-
Ala
CGC
[SRA]
>SRA1033455
SRR035088.262285
454 Sequencing (SRP001809)
317
390
+
Ala
CGC
[SRA]
>SRA1033645
SRR035088.311311
454 Sequencing (SRP001809)
198
125
-
Ala
CGC
[SRA]
>SRA1034766
SRR035089.169153
454 Sequencing (SRP001810)
227
154
-
Ala
CGC
[SRA]
>SRA1035601
SRR035089.338605
454 Sequencing (SRP001810)
305
232
-
Ala
CGC
[SRA]
>SRA1035723
SRR035089.362304
454 Sequencing (SRP001810)
168
95
-
Ala
CGC
[SRA]
>SRA1035837
SRR035089.385362
454 Sequencing (SRP001810)
218
145
-
Ala
CGC
[SRA]
>SRA1036578
SRR035089.553928
454 Sequencing (SRP001810)
305
232
-
Ala
CGC
[SRA]
>SRA1036915
SRR035090.37963
454 Sequencing (SRP001811)
338
411
+
Ala
CGC
[SRA]
>SRA1037026
SRR035090.60961
454 Sequencing (SRP001811)
430
357
-
Ala
CGC
[SRA]
>SRA1037142
SRR035090.81229
454 Sequencing (SRP001811)
179
106
-
Ala
CGC
[SRA]
>SRA1037329
SRR035090.117164
454 Sequencing (SRP001811)
292
219
-
Ala
CGC
[SRA]
>SRA1037404
SRR035090.129227
454 Sequencing (SRP001811)
379
306
-
Ala
CGC
[SRA]
>SRA1037458
SRR035090.137586
454 Sequencing (SRP001811)
288
361
+
Ala
CGC
[SRA]
>SRA1037703
SRR035090.176144
454 Sequencing (SRP001811)
246
173
-
Ala
CGC
[SRA]
>SRA1037715
SRR035090.179520
454 Sequencing (SRP001811)
255
328
+
Ala
CGC
[SRA]
>SRA1037830
SRR035090.202370
454 Sequencing (SRP001811)
315
242
-
Ala
CGC
[SRA]
>SRA1037840
SRR035090.203876
454 Sequencing (SRP001811)
244
171
-
Ala
CGC
[SRA]
>SRA1037874
SRR035090.209863
454 Sequencing (SRP001811)
188
261
+
Ala
CGC
[SRA]
>SRA1037886
SRR035090.212288
454 Sequencing (SRP001811)
142
215
+
Ala
CGC
[SRA]
>SRA1037925
SRR035090.219406
454 Sequencing (SRP001811)
48
121
+
Ala
CGC
[SRA]
>SRA1038013
SRR035090.233813
454 Sequencing (SRP001811)
351
278
-
Ala
CGC
[SRA]
>SRA1038220
SRR035090.266931
454 Sequencing (SRP001811)
258
331
+
Ala
CGC
[SRA]
>SRA1038309
SRR035090.285125
454 Sequencing (SRP001811)
235
308
+
Ala
CGC
[SRA]
>SRA1038417
SRR035090.300502
454 Sequencing (SRP001811)
91
164
+
Ala
CGC
[SRA]
>SRA1038508
SRR035090.318188
454 Sequencing (SRP001811)
84
11
-
Ala
CGC
[SRA]
>SRA1038560
SRR035090.327795
454 Sequencing (SRP001811)
189
262
+
Ala
CGC
[SRA]
>SRA1038674
SRR035090.347746
454 Sequencing (SRP001811)
236
309
+
Ala
CGC
[SRA]
>SRA1038700
SRR035090.351975
454 Sequencing (SRP001811)
206
279
+
Ala
CGC
[SRA]
>SRA1038733
SRR035090.356411
454 Sequencing (SRP001811)
201
274
+
Ala
CGC
[SRA]
>SRA1038786
SRR035090.365484
454 Sequencing (SRP001811)
229
302
+
Ala
CGC
[SRA]
>SRA1038971
SRR035090.402720
454 Sequencing (SRP001811)
133
206
+
Ala
CGC
[SRA]
>SRA1039016
SRR035090.407876
454 Sequencing (SRP001811)
120
193
+
Ala
CGC
[SRA]
>SRA1039042
SRR035090.414918
454 Sequencing (SRP001811)
294
221
-
Ala
CGC
[SRA]
>SRA1039093
SRR035090.423351
454 Sequencing (SRP001811)
105
178
+
Ala
CGC
[SRA]
>SRA1039136
SRR035090.430142
454 Sequencing (SRP001811)
260
333
+
Ala
CGC
[SRA]
>SRA1039154
SRR035090.433143
454 Sequencing (SRP001811)
235
308
+
Ala
CGC
[SRA]
>SRA1039253
SRR035090.453036
454 Sequencing (SRP001811)
232
305
+
Ala
CGC
[SRA]
>SRA1039548
SRR035090.514031
454 Sequencing (SRP001811)
94
21
-
Ala
CGC
[SRA]
>SRA1039670
SRR035090.541144
454 Sequencing (SRP001811)
126
199
+
Ala
CGC
[SRA]
>SRA1039672
SRR035090.541467
454 Sequencing (SRP001811)
195
122
-
Ala
CGC
[SRA]
>SRA1044537
SRR035092.295716
454 Sequencing (SRP001813)
332
259
-
Ala
CGC
[SRA]
>SRA1045876
SRR035093.186126
454 Sequencing (SRP001814)
110
37
-
Ala
CGC
[SRA]
>SRA1046024
SRR035093.218587
454 Sequencing (SRP001814)
112
185
+
Ala
CGC
[SRA]
>SRA1046076
SRR035093.230868
454 Sequencing (SRP001814)
269
196
-
Ala
CGC
[SRA]
>SRA1046580
SRR035093.336421
454 Sequencing (SRP001814)
231
304
+
Ala
CGC
[SRA]
>SRA1046927
SRR035093.419966
454 Sequencing (SRP001814)
111
184
+
Ala
CGC
[SRA]
>SRA1047138
SRR035093.464122
454 Sequencing (SRP001814)
109
36
-
Ala
CGC
[SRA]
>SRA1052333
SRR035098.183483
454 Sequencing (SRP001819)
322
395
+
Ala
CGC
[SRA]
>SRA1052359
SRR035098.187453
454 Sequencing (SRP001819)
386
313
-
Ala
CGC
[SRA]
>SRA1053980
SRR035099.24068
454 Sequencing (SRP001820)
200
127
-
Ala
CGC
[SRA]
>SRA1054006
SRR035099.33218
454 Sequencing (SRP001820)
215
288
+
Ala
CGC
[SRA]
>SRA1054089
SRR035099.54354
454 Sequencing (SRP001820)
352
279
-
Ala
CGC
[SRA]
>SRA1054117
SRR035099.62528
454 Sequencing (SRP001820)
201
128
-
Ala
CGC
[SRA]
>SRA1054127
SRR035099.65846
454 Sequencing (SRP001820)
452
379
-
Ala
CGC
[SRA]
>SRA1054242
SRR035099.91526
454 Sequencing (SRP001820)
201
128
-
Ala
CGC
[SRA]
>SRA1054401
SRR035099.125308
454 Sequencing (SRP001820)
440
367
-
Ala
CGC
[SRA]
>SRA1054521
SRR035099.154279
454 Sequencing (SRP001820)
199
272
+
Ala
CGC
[SRA]
>SRA1054603
SRR035099.171088
454 Sequencing (SRP001820)
392
319
-
Ala
CGC
[SRA]
>SRA1054702
SRR035099.190412
454 Sequencing (SRP001820)
291
218
-
Ala
CGC
[SRA]
>W1610721353
LMBR01000173
Chlorobiota
Chlorobium limicola [LMBR]
3132
3057
-
Ala
CGC
[ENA]
¡û
>W1610947208
LUZT01000012
Chlorobiota
Chlorobiales bacterium Clorobi_01 [LUZT]
18358
18283
-
Ala
CGC
[ENA]
¡û
>W1610977629
LVWG01000017
Chlorobiota
Pelodictyon luteolum [LVWG]
76828
76755
-
Ala
CGC
[ENA]
¡û
Identical group No.458396 (77 seq.)
>W1710874089
LMNH01000006
Actinomycetota
Nocardioides sp. Leaf285 [LMNH]
24559
24634
+
Ala
CGC
[ENA]
¡û
>W1710874874
LMNY01000002
Actinomycetota
Nocardioides sp. Leaf307 [LMNY]
1190464
1190389
-
Ala
CGC
[ENA]
¡û
>W1710879970
LMSA01000001
Actinomycetota
Knoellia sp. Soil729 [LMSA]
886776
886701
-
Ala
CGC
[ENA]
¡û
>W1710880976
LMSS01000003
Actinomycetota
Phycicoccus sp. Soil802 [LMSS]
530645
530718
+
Ala
CGC
[ENA]
¡û
>W1710881008
LMST01000001
Actinomycetota
Phycicoccus sp. Soil803 [LMST]
827421
827496
+
Ala
CGC
[ENA]
¡û
>W1710881220
LMSX01000009
Actinomycetota
Terrabacter sp. Soil811 [LMSX]
47166
47239
+
Ala
CGC
[ENA]
¡û
>W1711137999
LVCF01000004
Actinomycetota
Branchiibius sp. NY16-3462-2 [LVCF]
63197
63272
+
Ala
CGC
[ENA]
¡û
>W1711491988
MKKA01000011
Actinomycetota
Ornithinimicrobium sp. CNJ-824 [MKKA]
297598
297523
-
Ala
CGC
[ENA]
¡û
>W131155919
AQOZ01000019
Actinomycetota
Nocardioides sp. Iso805N [AQOZ]
130903
130978
+
Ala
CGC
[ENA]
¡û
>W131217048
ATWJ01000012
Actinomycetota
Ornithinimicrobium pekingense DSM 21552 [ATWJ]
300669
300594
-
Ala
CGC
[ENA]
¡û
>W131227579
AUFG01000022
Actinomycetota
Arsenicicoccus bolidensis DSM 15745 [AUFG]
22741
22666
-
Ala
CGC
[ENA]
¡û
>w012505
AAMN01000004
Actinomycetota
Janibacter sp. HTCC2649 [AAMN]
13087
13164
+
Ala
CGC
[ENA]
¡û
>WENV180098586
MTBK01255882
[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
206
281
+
Ala
CGC
[ENA]
¢þ
>WENV180209244
OBAK01047786
[OBAK] marine metagenome; ENVO.00002150
108
183
+
Ala
CGC
[ENA]
¢þ
>WENV180363926
OBNZ01026382
[OBNZ] marine metagenome; ENVO:00002010
565
492
-
Ala
CGC
[ENA]
¢þ
>WENV181163259
OEIO01171284
[OEIO] marine metagenome; sea ice
268
341
+
Ala
CGC
[ENA]
¢þ
>WENV181189837
OEOF01255228
[OEOF] activated sludge metagenome; Activated Sludge
192
118
-
Ala
CGC
[ENA]
¢þ
>WENV181309633
OFIW01017677
[OFIW] marine metagenome; seawater
286
359
+
Ala
CGC
[ENA]
¢þ
>WENV181314031
OFJI01010338
[OFJI] marine metagenome; sea ice
471
398
-
Ala
CGC
[ENA]
¢þ
>WENV181371666
OFQV01038799
[OFQV] wastewater metagenome; WWTP Cannobio (Effluent)
211
136
-
Ala
CGC
[ENA]
¢þ
>WENV181391568
OFRT01023363
[OFRT] seawater metagenome; seawater
419
346
-
Ala
CGC
[ENA]
¢þ
>WENV181392925
OFRX01017585
[OFRX] seawater metagenome; seawater
764
837
+
Ala
CGC
[ENA]
¢þ
>W141242917
CAIZ01000134
Actinomycetota
Phycicoccus elongatus Lp2 [CAIZ]
11501
11426
-
Ala
CGC
[ENA]
¡û
>W141243081
CAJC01000209
Actinomycetota
Tetrasphaera jenkinsii Ben 74 [CAJC]
1657
1730
+
Ala
CGC
[ENA]
¡û
>WENV183619068
OOFP01023215
[OOFP] marine metagenome; seawater
419
346
-
Ala
CGC
[ENA]
¢þ
>WENV183629294
OOGP01017720
[OOGP] marine metagenome; seawater
764
837
+
Ala
CGC
[ENA]
¢þ
>WENV183629990
OOGR01002528
[OOGR] marine metagenome; seawater
800
873
+
Ala
CGC
[ENA]
¢þ
>WENV183631178
OOGU01045315
[OOGU] marine metagenome; sea ice
254
181
-
Ala
CGC
[ENA]
¢þ
>WENV183678099
ORJL011837076
[ORJL] groundwater metagenome; groundwater
135
61
-
Ala
CGC
[ENA]
¢þ
>WENV170011466
APMI01067364
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
492
567
+
Ala
CGC
[ENA]
¢þ
>WENV170011744
APMI01087326
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
2396
2321
-
Ala
CGC
[ENA]
¢þ
>WENV170552070
CXWJ01036985
[CXWJ] wastewater metagenome; activated sludge
980
1055
+
Ala
CGC
[ENA]
¢þ
>WENV170553898
CXWK01036890
[CXWK] wastewater metagenome; activated sludge
2721
2646
-
Ala
CGC
[ENA]
¢þ
>WENV170568582
FLMP01052746
[FLMP] seawater metagenome; seawater
519
446
-
Ala
CGC
[ENA]
¢þ
>WENV170570997
FLOH01000049
[FLOH] marine metagenome; water
56323
56248
-
Ala
CGC
[ENA]
¢þ
>WENV170572212
FLOH01000624
[FLOH] marine metagenome; water
23490
23563
+
Ala
CGC
[ENA]
¢þ
>WENV170604036
FUWD010355565
[FUWD] metagenome; unknown
503
576
+
Ala
CGC
[ENA]
¢þ
>WENV170620698
FUWD013037114
[FUWD] metagenome; unknown
4636
4561
-
Ala
CGC
[ENA]
¢þ
>WENV170626818
FUWD013229707
[FUWD] metagenome; unknown
2328
2255
-
Ala
CGC
[ENA]
¢þ
>WENV170626823
FUWD013229727
[FUWD] metagenome; unknown
14777
14704
-
Ala
CGC
[ENA]
¢þ
>WENV170950521
MEHZ011501554
[MEHZ] marine metagenome; marine surface water
150
223
+
Ala
CGC
[ENA]
¢þ
>C181197163
CP031229
Actinomycetota
Ornithinimicrobium avium AMA3305 [CP031229]
3295262
3295337
+
Ala
CGC
-
¡û
>C191150896
CP036403
Actinomycetota
Ornithinimicrobium sp. HY006 [CP036403]
579548
579623
+
Ala
CGC
-
¡û
>C191158365
CP038213
Actinomycetota
Ornithinimicrobium flavum CPCC 203535 [CP038213]
654425
654498
+
Ala
CGC
-
¡û
>C191186692
CP041091
Actinomycetota
Nocardioides sambongensis KUDC 5002 [CP041091]
4133674
4133749
+
Ala
CGC
-
¡û
>W1911495838
OBQK01000002
Actinomycetota
Ornithinimicrobium cerasi USBA17B2 [OBQK]
353017
352942
-
Ala
CGC
[ENA]
¡û
>W1911533118
OKQN01000007
Actinomycetota
Janibacter massiliensis Marseille-P4121 [OKQN]
282832
282906
+
Ala
CGC
[ENA]
¡û
>W1911817412
QZMN01000003
Actinomycetota
Ornithinimicrobium cerasi CPCC 203383 [QZMN]
146021
146096
+
Ala
CGC
[ENA]
¡û
>W1810364573
PVTI01000027
Actinomycetota
Knoellia remsis ATCC BAA-1496 [PVTI]
46856
46930
+
Ala
CGC
[ENA]
¡û
>W1810594934
QGDN01000001
Actinomycetota
Branchiibius hedensis DSM 22951 [QGDN]
2599697
2599622
-
Ala
CGC
[ENA]
¡û
>SRA1023718
SRR035084.160050
454 Sequencing (SRP001805)
110
37
-
Ala
CGC
[SRA]
>SRA1024268
SRR035084.288110
454 Sequencing (SRP001805)
84
159
+
Ala
CGC
[SRA]
>SRA1024280
SRR035084.291525
454 Sequencing (SRP001805)
306
233
-
Ala
CGC
[SRA]
>C151090483
CP012070
Actinomycetota
Arsenicicoccus sp. oral taxon 190 F0371 [CP012070]
154309
154234
-
Ala
CGC
-
¡û
>SRA1046915
SRR035093.418173
454 Sequencing (SRP001814)
232
305
+
Ala
CGC
[SRA]
>SRA1047376
SRR035093.526786
454 Sequencing (SRP001814)
232
305
+
Ala
CGC
[SRA]
>W11125308
ADVI01000094
Actinomycetota
Nocardioidaceae bacterium Broad-1 [ADVI]
175894
175819
-
Ala
CGC
[ENA]
¡û
>W1511540030
JZDQ01000004
Actinomycetota
Nocardioides luteus BAFB [JZDQ]
77960
78035
+
Ala
CGC
[ENA]
¡û
>W11155969
AFAQ01001944
Actinomycetota
Rhodococcus sp. R04 [AFAQ]
378
453
+
Ala
CGC
[ENA]
¡û
>W1610027085
AVPI01000034
Actinomycetota
Knoellia flava TL1 [AVPI]
73193
73118
-
Ala
CGC
[ENA]
¡û
>W1610027137
AVPJ01000021
Actinomycetota
Knoellia sinensis KCTC 19936 [AVPJ]
21658
21585
-
Ala
CGC
[ENA]
¡û
>W1610027179
AVPK01000010
Actinomycetota
Knoellia subterranea KCTC 19937 [AVPK]
82548
82473
-
Ala
CGC
[ENA]
¡û
>W1610736435
LMNH01000006
Actinomycetota
Nocardioides sp. Leaf285 [LMNH]
24559
24634
+
Ala
CGC
[ENA]
¡û
>W1610737220
LMNY01000002
Actinomycetota
Nocardioides sp. Leaf307 [LMNY]
1190464
1190389
-
Ala
CGC
[ENA]
¡û
>W1610742316
LMSA01000001
Actinomycetota
Knoellia sp. Soil729 [LMSA]
886776
886701
-
Ala
CGC
[ENA]
¡û
>W1610743322
LMSS01000003
Actinomycetota
Phycicoccus sp. Soil802 [LMSS]
530645
530718
+
Ala
CGC
[ENA]
¡û
>W1610743354
LMST01000001
Actinomycetota
Phycicoccus sp. Soil803 [LMST]
827421
827496
+
Ala
CGC
[ENA]
¡û
>W1610743566
LMSX01000009
Actinomycetota
Terrabacter sp. Soil811 [LMSX]
47166
47239
+
Ala
CGC
[ENA]
¡û
>W1610949085
LVCF01000004
Actinomycetota
Branchiibius sp. NY16-3462-2 [LVCF]
63197
63272
+
Ala
CGC
[ENA]
¡û
>W1710023250
AVPI01000034
Actinomycetota
Knoellia flava TL1 [AVPI]
73193
73118
-
Ala
CGC
[ENA]
¡û
>W1710023302
AVPJ01000021
Actinomycetota
Knoellia sinensis KCTC 19936 [AVPJ]
21658
21585
-
Ala
CGC
[ENA]
¡û
>W1710023344
AVPK01000010
Actinomycetota
Knoellia subterranea KCTC 19937 [AVPK]
82548
82473
-
Ala
CGC
[ENA]
¡û
>W1710506066
FMUH01000001
Actinomycetota
Klenkia marina DSM 45722 [FMUH]
383808
383733
-
Ala
CGC
[ENA]
¡û
>W1710515948
FNCF01000001
Actinomycetota
Klenkia brasiliensis [FNCF]
223466
223391
-
Ala
CGC
[ENA]
¡û
>W1710520327
FNFN01000002
Actinomycetota
Nocardioides sp. YR527 [FNFN]
36014
35939
-
Ala
CGC
[ENA]
¡û
>W1710524364
FNIR01000005
Actinomycetota
Klenkia soli [FNIR]
171030
170955
-
Ala
CGC
[ENA]
¡û
>W1710558766
FOMD01000002
Actinomycetota
Klenkia taihuensis [FOMD]
225075
225000
-
Ala
CGC
[ENA]
¡û
Identical group No.484656 (9 seq.)
>WENV180361961
OBNW01014311
[OBNW] marine metagenome; ENVO:00002010, 'SEA WATER
226
153
-
Ala
CGC
[ENA]
¢þ
>WENV180391761
OBPN01039235
[OBPN] marine metagenome; seawater
224
151
-
Ala
CGC
[ENA]
¢þ
>WENV170626727
FUWD013229117
[FUWD] metagenome; unknown
13457
13382
-
Ala
CGC
[ENA]
¢þ
>WENV170629410
FUWD013269716
[FUWD] metagenome; unknown
16497
16422
-
Ala
CGC
[ENA]
¢þ
>SRA1024028
SRR035084.233560
454 Sequencing (SRP001805)
480
405
-
Ala
CGC
[SRA]
>SRA1024055
SRR035084.238269
454 Sequencing (SRP001805)
202
277
+
Ala
CGC
[SRA]
>SRA1046034
SRR035093.220917
454 Sequencing (SRP001814)
289
364
+
Ala
CGC
[SRA]
>SRA1046926
SRR035093.419879
454 Sequencing (SRP001814)
133
58
-
Ala
CGC
[SRA]
>SRA1053298
SRR035098.377159
454 Sequencing (SRP001819)
232
157
-
Ala
CGC
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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