tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001815)

Anticodon = CAA

HIT: 24 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.45849 (6 seq.)
>WENV170620179 FUWD013026865 [FUWD] metagenome; unknown 6410 6499 + Leu CAA [ENA] ¢þ
>WENV170628315 FUWD013244687 [FUWD] metagenome; unknown 6410 6499 + Leu CAA [ENA] ¢þ
>SRA1026080 SRR035085.139674 454 Sequencing (SRP001806) 133 44 - Leu CAA [SRA]
>SRA1026102 SRR035085.143604 454 Sequencing (SRP001806) 133 44 - Leu CAA [SRA]
>SRA1041806 SRR035091.297564 454 Sequencing (SRP001812) 226 137 - Leu CAA [SRA]
>SRA1048859 SRR035094.265095 454 Sequencing (SRP001815) 158 247 + Leu CAA [SRA]
Identical group No.72766 (10 seq.)
>WENV170621357 FUWD013056597 [FUWD] metagenome; unknown 842 930 + Leu CAA [ENA] ¢þ
>WENV170629536 FUWD013273001 [FUWD] metagenome; unknown 842 930 + Leu CAA [ENA] ¢þ
>SRA1017677 SRR035082.179412 454 Sequencing (SRP001803) 400 488 + Leu CAA [SRA]
>SRA1018518 SRR035082.303820 454 Sequencing (SRP001803) 509 421 - Leu CAA [SRA]
>SRA1026139 SRR035085.151257 454 Sequencing (SRP001806) 375 287 - Leu CAA [SRA]
>SRA1026648 SRR035085.249103 454 Sequencing (SRP001806) 375 287 - Leu CAA [SRA]
>SRA1029040 SRR035087.64053 454 Sequencing (SRP001808) 436 348 - Leu CAA [SRA]
>SRA1029298 SRR035087.104584 454 Sequencing (SRP001808) 438 350 - Leu CAA [SRA]
>SRA1035824 SRR035089.383553 454 Sequencing (SRP001810) 198 110 - Leu CAA [SRA]
>SRA1048707 SRR035094.232403 454 Sequencing (SRP001815) 187 275 + Leu CAA [SRA]
Identical group No.79286 (4 seq.)
>WENV170622774 FUWD013120858 [FUWD] metagenome; unknown 905 817 - Leu CAA [ENA] ¢þ
>WENV170630987 FUWD013334628 [FUWD] metagenome; unknown 905 817 - Leu CAA [ENA] ¢þ
>SRA1040113 SRR035091.40836 454 Sequencing (SRP001812) 366 454 + Leu CAA [SRA]
>SRA1047955 SRR035094.75091 454 Sequencing (SRP001815) 185 273 + Leu CAA [SRA]
Identical group No.83988 (1 seq.)
>SRA1047672 SRR035094.17156 454 Sequencing (SRP001815) 171 259 + Leu CAA [SRA]
Identical group No.83993 (1 seq.)
>SRA1048095 SRR035094.107447 454 Sequencing (SRP001815) 17 105 + Leu CAA [SRA]
Identical group No.84002 (1 seq.)
>SRA1048910 SRR035094.283772 454 Sequencing (SRP001815) 212 125 - Leu CAA [SRA]
Identical group No.93373 (8 seq.)
>W1711306922 MANV01000232 Thermodesulfobacteriota Desulfobacterales bacterium C00003104 [MANV] 1355 1268 - Leu CAA [ENA] ¡û
>W1711317646 MAXM01000146 Thermodesulfobacteriota Desulfobacterales bacterium C00003106 [MAXM] 2624 2711 + Leu CAA [ENA] ¡û
>WENV170692193 LGOV01000298 [LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge 2227 2314 + Leu CAA [ENA] ¢þ
>WENV170693390 LGVC01006289 [LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive 1355 1268 - Leu CAA [ENA] ¢þ
>WENV170694040 LGVD01007556 [LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at 1408 1321 - Leu CAA [ENA] ¢þ
>WENV170694701 LGVE01003388 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 1442 1355 - Leu CAA [ENA] ¢þ
>WENV170696218 LGVF01004127 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 1300 1213 - Leu CAA [ENA] ¢þ
>SRA1047788 SRR035094.41630 454 Sequencing (SRP001815) 202 116 - Leu CAA [SRA]
Identical group No.107018 (1 seq.)
>SRA1048749 SRR035094.240029 454 Sequencing (SRP001815) 219 134 - Leu CAA [SRA]
Identical group No.112614 (17 seq.)
>W131157559 AQSK01000203 Unclassified Cloacimonetes bacterium SCGC AAA252-E13 KSB1 bacterium SCGC AAA252-E13 [AQSK] 18920 18834 - Leu CAA [ENA] ¡û
>W131157683 AQSO01000179 Unclassified Cloacimonetes bacterium SCGC AAA252-D03 KSB1 bacterium SCGC AAA252-D03 [AQSO] 13137 13223 + Leu CAA [ENA] ¡û
>W131192106 ASKM01000008 Unclassified Cloacimonetes bacterium SCGC AAA252-N05 KSB1 bacterium SCGC AAA252-N05 [ASKM] 1927 2013 + Leu CAA [ENA] ¡û
>W131192136 ASKO01000009 Unclassified Cloacimonetes bacterium SCGC AAA252-M08 KSB1 bacterium SCGC AAA252-M08 [ASKO] 34514 34600 + Leu CAA [ENA] ¡û
>W131192977 ASNI01000013 Unclassified Cloacimonetes bacterium SCGC AAA252-N17 KSB1 bacterium SCGC AAA252-N17 [ASNI] 34507 34593 + Leu CAA [ENA] ¡û
>W131193003 ASNJ01000019 Unclassified Cloacimonetes bacterium SCGC AAA252-N11 KSB1 bacterium SCGC AAA252-N11 [ASNJ] 902 988 + Leu CAA [ENA] ¡û
>W131193031 ASNK01000027 Unclassified Cloacimonetes bacterium SCGC AAA252-E20 KSB1 bacterium SCGC AAA252-E20 [ASNK] 16303 16217 - Leu CAA [ENA] ¡û
>W131193042 ASNL01000008 Unclassified Cloacimonetes bacterium SCGC AAA252-P14 KSB1 bacterium SCGC AAA252-P14 [ASNL] 1428 1342 - Leu CAA [ENA] ¡û
>W131193109 ASNO01000012 Unclassified Cloacimonetes bacterium SCGC AAA252-I16 KSB1 bacterium SCGC AAA252-I16 [ASNO] 34701 34787 + Leu CAA [ENA] ¡û
>W141139695 AWNX01000060 Unclassified Cloacimonetes bacterium JGI OTU-1 [AWNX] 1846 1932 + Leu CAA [ENA] ¡û
>W141139714 AWNY01000001 Unclassified Cloacimonetes bacterium JGI OTU-2 [AWNY] 13137 13223 + Leu CAA [ENA] ¡û
>WENV170624985 FUWD013189460 [FUWD] metagenome; unknown 6658 6744 + Leu CAA [ENA] ¢þ
>WENV170633245 FUWD013393059 [FUWD] metagenome; unknown 6658 6744 + Leu CAA [ENA] ¢þ
>SRA1033169 SRR035088.188561 454 Sequencing (SRP001809) 265 179 - Leu CAA [SRA]
>SRA1035681 SRR035089.354976 454 Sequencing (SRP001810) 264 352 + Leu CAA [SRA]
>SRA1048939 SRR035094.292237 454 Sequencing (SRP001815) 113 199 + Leu CAA [SRA]
>SRA1049888 SRR035095.154696 454 Sequencing (SRP001816) 278 364 + Leu CAA [SRA]
Identical group No.118384 (6 seq.)
>WENV170217514 CEPX01397657 [CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1431 1345 - Leu CAA [ENA] ¢þ
>WENV170623255 FUWD013143168 [FUWD] metagenome; unknown 165 81 - Leu CAA [ENA] ¢þ
>WENV170631514 FUWD013355342 [FUWD] metagenome; unknown 165 81 - Leu CAA [ENA] ¢þ
>SRA1032066 SRR035087.543435 454 Sequencing (SRP001808) 119 35 - Leu CAA [SRA]
>SRA1048724 SRR035094.235439 454 Sequencing (SRP001815) 176 92 - Leu CAA [SRA]
>SRA1049322 SRR035095.56511 454 Sequencing (SRP001816) 23 107 + Leu CAA [SRA]
Identical group No.131598 (3 seq.)
>WENV170607697 FUWD010849918 [FUWD] metagenome; unknown 143 57 - Leu CAA [ENA] ¢þ
>SRA1048803 SRR035094.253109 454 Sequencing (SRP001815) 97 11 - Leu CAA [SRA]
>SRA1048849 SRR035094.262681 454 Sequencing (SRP001815) 97 11 - Leu CAA [SRA]
Identical group No.131613 (3 seq.)
>WENV170608215 FUWD010903147 [FUWD] metagenome; unknown 27 113 + Leu CAA [ENA] ¢þ
>WENV170696821 LGVF01052405 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 326 240 - Leu CAA [ENA] ¢þ
>SRA1048514 SRR035094.191483 454 Sequencing (SRP001815) 177 263 + Leu CAA [SRA]
Identical group No.131695 (2 seq.)
>WENV170612316 FUWD012571277 [FUWD] metagenome; unknown 267 353 + Leu CAA [ENA] ¢þ
>SRA1048239 SRR035094.132666 454 Sequencing (SRP001815) 147 61 - Leu CAA [SRA]
Identical group No.131767 (7 seq.)
>WENV170620525 FUWD013033148 [FUWD] metagenome; unknown 3497 3411 - Leu CAA [ENA] ¢þ
>WENV170628669 FUWD013250591 [FUWD] metagenome; unknown 3497 3411 - Leu CAA [ENA] ¢þ
>SRA1032743 SRR035088.92729 454 Sequencing (SRP001809) 115 201 + Leu CAA [SRA]
>SRA1049027 SRR035094.318790 454 Sequencing (SRP001815) 162 76 - Leu CAA [SRA]
>SRA1049493 SRR035095.86331 454 Sequencing (SRP001816) 115 201 + Leu CAA [SRA]
>SRA1049730 SRR035095.128259 454 Sequencing (SRP001816) 323 409 + Leu CAA [SRA]
>SRA1050191 SRR035095.209569 454 Sequencing (SRP001816) 101 15 - Leu CAA [SRA]
Identical group No.131808 (4 seq.)
>WENV170623028 FUWD013133552 [FUWD] metagenome; unknown 136 220 + Leu CAA [ENA] ¢þ
>WENV170631263 FUWD013346622 [FUWD] metagenome; unknown 136 220 + Leu CAA [ENA] ¢þ
>SRA1044979 SRR035092.384345 454 Sequencing (SRP001813) 66 150 + Leu CAA [SRA]
>SRA1048265 SRR035094.136793 454 Sequencing (SRP001815) 362 278 - Leu CAA [SRA]
Identical group No.131809 (4 seq.)
>WENV170623033 FUWD013133822 [FUWD] metagenome; unknown 197 283 + Leu CAA [ENA] ¢þ
>WENV170629094 FUWD013260824 [FUWD] metagenome; unknown 4636 4722 + Leu CAA [ENA] ¢þ
>SRA1040829 SRR035091.156654 454 Sequencing (SRP001812) 152 66 - Leu CAA [SRA]
>SRA1048466 SRR035094.180408 454 Sequencing (SRP001815) 208 122 - Leu CAA [SRA]
Identical group No.131829 (10 seq.)
>WENV170624717 FUWD013185516 [FUWD] metagenome; unknown 2334 2248 - Leu CAA [ENA] ¢þ
>WENV170626772 FUWD013229378 [FUWD] metagenome; unknown 10509 10595 + Leu CAA [ENA] ¢þ
>WENV170632996 FUWD013389736 [FUWD] metagenome; unknown 2334 2248 - Leu CAA [ENA] ¢þ
>SRA1017183 SRR035082.95270 454 Sequencing (SRP001803) 42 128 + Leu CAA [SRA]
>SRA1017331 SRR035082.120024 454 Sequencing (SRP001803) 304 390 + Leu CAA [SRA]
>SRA1017500 SRR035082.150840 454 Sequencing (SRP001803) 304 390 + Leu CAA [SRA]
>SRA1018559 SRR035082.310961 454 Sequencing (SRP001803) 166 252 + Leu CAA [SRA]
>SRA1041435 SRR035091.242009 454 Sequencing (SRP001812) 16 102 + Leu CAA [SRA]
>SRA1048365 SRR035094.158066 454 Sequencing (SRP001815) 238 324 + Leu CAA [SRA]
>SRA1050413 SRR035095.257148 454 Sequencing (SRP001816) 251 165 - Leu CAA [SRA]
Identical group No.145024 (1 seq.)
>SRA1047815 SRR035094.46381 454 Sequencing (SRP001815) 172 89 - Leu CAA [SRA]
Identical group No.145027 (1 seq.)
>SRA1048087 SRR035094.106509 454 Sequencing (SRP001815) 298 212 - Leu CAA [SRA]
Identical group No.145035 (1 seq.)
>SRA1048460 SRR035094.177955 454 Sequencing (SRP001815) 191 108 - Leu CAA [SRA]
Identical group No.169183 (2 seq.)
>SRA1042836 SRR035091.453344 454 Sequencing (SRP001812) 95 10 - Leu CAA [SRA]
>SRA1048176 SRR035094.122427 454 Sequencing (SRP001815) 534 449 - Leu CAA [SRA]
Identical group No.174301 (1 seq.)
>SRA1047971 SRR035094.79086 454 Sequencing (SRP001815) 342 427 + Leu CAA [SRA]
Identical group No.174305 (1 seq.)
>SRA1048350 SRR035094.153988 454 Sequencing (SRP001815) 230 315 + Leu CAA [SRA]
Identical group No.222893 (5 seq.)
>WENV170622000 FUWD013083310 [FUWD] metagenome; unknown 1154 1237 + Leu CAA [ENA] ¢þ
>WENV170630203 FUWD013298499 [FUWD] metagenome; unknown 1154 1237 + Leu CAA [ENA] ¢þ
>SRA1048327 SRR035094.148184 454 Sequencing (SRP001815) 187 104 - Leu CAA [SRA]
>SRA1048346 SRR035094.152394 454 Sequencing (SRP001815) 187 104 - Leu CAA [SRA]
>SRA1050731 SRR035096.6397 454 Sequencing (SRP001817) 97 14 - Leu CAA [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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