tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001815)

Anticodon = CAC

HIT: 27 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.264015 (1 seq.)
>SRA1048794 SRR035094.250020 454 Sequencing (SRP001815) 242 165 - Val CAC [SRA]
Identical group No.272415 (8 seq.)
>WENV170625894 FUWD013208601 [FUWD] metagenome; unknown 1390 1464 + Val CAC [ENA] ¢þ
>WENV170628987 FUWD013258108 [FUWD] metagenome; unknown 14190 14116 - Val CAC [ENA] ¢þ
>SRA1026474 SRR035085.213315 454 Sequencing (SRP001806) 383 309 - Val CAC [SRA]
>SRA1040572 SRR035091.117064 454 Sequencing (SRP001812) 174 248 + Val CAC [SRA]
>SRA1042011 SRR035091.327813 454 Sequencing (SRP001812) 186 112 - Val CAC [SRA]
>SRA1043003 SRR035092.19228 454 Sequencing (SRP001813) 282 356 + Val CAC [SRA]
>SRA1044554 SRR035092.300545 454 Sequencing (SRP001813) 202 126 - Val CAC [SRA]
>SRA1047658 SRR035094.13503 454 Sequencing (SRP001815) 501 427 - Val CAC [SRA]
Identical group No.300475 (2 seq.)
>SRA1030232 SRR035087.246580 454 Sequencing (SRP001808) 333 257 - Val CAC [SRA]
>SRA1047740 SRR035094.32700 454 Sequencing (SRP001815) 106 182 + Val CAC [SRA]
Identical group No.358372 (3 seq.)
>WENV170612597 FUWD012643094 [FUWD] metagenome; unknown 184 108 - Val CAC [ENA] ¢þ
>SRA1043443 SRR035092.115825 454 Sequencing (SRP001813) 343 267 - Val CAC [SRA]
>SRA1048243 SRR035094.133632 454 Sequencing (SRP001815) 206 130 - Val CAC [SRA]
Identical group No.415508 (1 seq.)
>SRA1047637 SRR035094.1292 454 Sequencing (SRP001815) 164 91 - Val CAC [SRA]
Identical group No.415515 (1 seq.)
>SRA1047709 SRR035094.25772 454 Sequencing (SRP001815) 204 128 - Val CAC [SRA]
Identical group No.415518 (1 seq.)
>SRA1047729 SRR035094.31132 454 Sequencing (SRP001815) 96 21 - Val CAC [SRA]
Identical group No.415533 (2 seq.)
>SRA1047920 SRR035094.68201 454 Sequencing (SRP001815) 160 87 - Val CAC [SRA]
>SRA1048964 SRR035094.298107 454 Sequencing (SRP001815) 160 87 - Val CAC [SRA]
Identical group No.415538 (1 seq.)
>SRA1048001 SRR035094.85078 454 Sequencing (SRP001815) 218 144 - Val CAC [SRA]
Identical group No.415543 (1 seq.)
>SRA1048107 SRR035094.110373 454 Sequencing (SRP001815) 334 410 + Val CAC [SRA]
Identical group No.415553 (1 seq.)
>SRA1048269 SRR035094.136941 454 Sequencing (SRP001815) 42 118 + Val CAC [SRA]
Identical group No.415564 (1 seq.)
>SRA1048504 SRR035094.188966 454 Sequencing (SRP001815) 86 10 - Val CAC [SRA]
Identical group No.467820 (70 seq.)
>WENV180393052 OBPP01061992 [OBPP] marine metagenome; ENVO:00002042 224 297 + Val CAC [ENA] ¢þ
>WENV180398929 OBQE01000157 [OBQE] marine metagenome; ENVO.00002150 250 177 - Val CAC [ENA] ¢þ
>WENV180635929 OCRE01026714 [OCRE] marine metagenome; Seawater 329 257 - Val CAC [ENA] ¢þ
>WENV180637941 OCRG01197835 [OCRG] marine metagenome; seawater 74 2 - Val CAC [ENA] ¢þ
>WENV170424646 CEUP01001947 [CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 259 331 + Val CAC [ENA] ¢þ
>WENV170424683 CEUP01003379 [CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 508 582 + Val CAC [ENA] ¢þ
>WENV170599000 FUWD010057609 [FUWD] metagenome; unknown 74 2 - Val CAC [ENA] ¢þ
>WENV170599356 FUWD010072340 [FUWD] metagenome; unknown 145 73 - Val CAC [ENA] ¢þ
>WENV170599499 FUWD010077173 [FUWD] metagenome; unknown 230 158 - Val CAC [ENA] ¢þ
>WENV170617032 FUWD012911683 [FUWD] metagenome; unknown 3741 3669 - Val CAC [ENA] ¢þ
>WENV170617046 FUWD012911684 [FUWD] metagenome; unknown 179 107 - Val CAC [ENA] ¢þ
>WENV170617244 FUWD012918844 [FUWD] metagenome; unknown 454 526 + Val CAC [ENA] ¢þ
>WENV170617247 FUWD012918845 [FUWD] metagenome; unknown 130 202 + Val CAC [ENA] ¢þ
>WENV170624813 FUWD013187197 [FUWD] metagenome; unknown 595 523 - Val CAC [ENA] ¢þ
>WENV170633086 FUWD013391135 [FUWD] metagenome; unknown 595 523 - Val CAC [ENA] ¢þ
>SRA1026841 SRR035086.5875 454 Sequencing (SRP001807) 123 51 - Val CAC [SRA]
>SRA1026855 SRR035086.11226 454 Sequencing (SRP001807) 216 144 - Val CAC [SRA]
>SRA1026875 SRR035086.18589 454 Sequencing (SRP001807) 139 211 + Val CAC [SRA]
>SRA1026898 SRR035086.24079 454 Sequencing (SRP001807) 195 267 + Val CAC [SRA]
>SRA1026978 SRR035086.37384 454 Sequencing (SRP001807) 122 50 - Val CAC [SRA]
>SRA1026993 SRR035086.39304 454 Sequencing (SRP001807) 239 167 - Val CAC [SRA]
>SRA1027011 SRR035086.43679 454 Sequencing (SRP001807) 526 454 - Val CAC [SRA]
>SRA1027024 SRR035086.46025 454 Sequencing (SRP001807) 416 344 - Val CAC [SRA]
>SRA1027109 SRR035086.63727 454 Sequencing (SRP001807) 195 123 - Val CAC [SRA]
>SRA1027113 SRR035086.64441 454 Sequencing (SRP001807) 430 358 - Val CAC [SRA]
>SRA1027125 SRR035086.67544 454 Sequencing (SRP001807) 381 453 + Val CAC [SRA]
>SRA1027132 SRR035086.68588 454 Sequencing (SRP001807) 216 144 - Val CAC [SRA]
>SRA1027188 SRR035086.77289 454 Sequencing (SRP001807) 207 135 - Val CAC [SRA]
>SRA1027189 SRR035086.77366 454 Sequencing (SRP001807) 218 290 + Val CAC [SRA]
>SRA1027211 SRR035086.82477 454 Sequencing (SRP001807) 286 358 + Val CAC [SRA]
>SRA1027246 SRR035086.89969 454 Sequencing (SRP001807) 200 272 + Val CAC [SRA]
>SRA1027309 SRR035086.104494 454 Sequencing (SRP001807) 352 424 + Val CAC [SRA]
>SRA1027322 SRR035086.106739 454 Sequencing (SRP001807) 218 290 + Val CAC [SRA]
>SRA1027386 SRR035086.116253 454 Sequencing (SRP001807) 145 217 + Val CAC [SRA]
>SRA1027461 SRR035086.127872 454 Sequencing (SRP001807) 256 184 - Val CAC [SRA]
>SRA1027583 SRR035086.151354 454 Sequencing (SRP001807) 464 536 + Val CAC [SRA]
>SRA1027604 SRR035086.158360 454 Sequencing (SRP001807) 311 239 - Val CAC [SRA]
>SRA1027606 SRR035086.159097 454 Sequencing (SRP001807) 219 291 + Val CAC [SRA]
>SRA1027688 SRR035086.173193 454 Sequencing (SRP001807) 127 199 + Val CAC [SRA]
>SRA1027700 SRR035086.176712 454 Sequencing (SRP001807) 207 135 - Val CAC [SRA]
>SRA1027816 SRR035086.200161 454 Sequencing (SRP001807) 144 72 - Val CAC [SRA]
>SRA1027819 SRR035086.200174 454 Sequencing (SRP001807) 194 122 - Val CAC [SRA]
>SRA1027848 SRR035086.206584 454 Sequencing (SRP001807) 332 404 + Val CAC [SRA]
>SRA1027906 SRR035086.216428 454 Sequencing (SRP001807) 218 290 + Val CAC [SRA]
>SRA1027942 SRR035086.223217 454 Sequencing (SRP001807) 216 144 - Val CAC [SRA]
>SRA1028037 SRR035086.245015 454 Sequencing (SRP001807) 247 175 - Val CAC [SRA]
>SRA1028072 SRR035086.252676 454 Sequencing (SRP001807) 347 275 - Val CAC [SRA]
>SRA1028101 SRR035086.258944 454 Sequencing (SRP001807) 126 54 - Val CAC [SRA]
>SRA1028145 SRR035086.266929 454 Sequencing (SRP001807) 221 293 + Val CAC [SRA]
>SRA1028199 SRR035086.274488 454 Sequencing (SRP001807) 235 307 + Val CAC [SRA]
>SRA1028410 SRR035086.320669 454 Sequencing (SRP001807) 210 282 + Val CAC [SRA]
>SRA1028494 SRR035086.339947 454 Sequencing (SRP001807) 241 169 - Val CAC [SRA]
>SRA1028518 SRR035086.344654 454 Sequencing (SRP001807) 158 86 - Val CAC [SRA]
>SRA1028522 SRR035086.347114 454 Sequencing (SRP001807) 127 199 + Val CAC [SRA]
>SRA1028558 SRR035086.357080 454 Sequencing (SRP001807) 171 99 - Val CAC [SRA]
>SRA1028602 SRR035086.370969 454 Sequencing (SRP001807) 288 216 - Val CAC [SRA]
>SRA1048348 SRR035094.152677 454 Sequencing (SRP001815) 373 301 - Val CAC [SRA]
>SRA1050849 SRR035096.31650 454 Sequencing (SRP001817) 294 222 - Val CAC [SRA]
>SRA1050859 SRR035096.33692 454 Sequencing (SRP001817) 359 287 - Val CAC [SRA]
>SRA1050991 SRR035096.67070 454 Sequencing (SRP001817) 281 353 + Val CAC [SRA]
>SRA1051003 SRR035096.68257 454 Sequencing (SRP001817) 125 53 - Val CAC [SRA]
>SRA1051019 SRR035096.69983 454 Sequencing (SRP001817) 330 402 + Val CAC [SRA]
>SRA1051046 SRR035096.75217 454 Sequencing (SRP001817) 330 402 + Val CAC [SRA]
>SRA1051097 SRR035096.84649 454 Sequencing (SRP001817) 188 116 - Val CAC [SRA]
>SRA1051146 SRR035096.94710 454 Sequencing (SRP001817) 127 55 - Val CAC [SRA]
>SRA1051170 SRR035096.101185 454 Sequencing (SRP001817) 63 135 + Val CAC [SRA]
>SRA1051255 SRR035096.121229 454 Sequencing (SRP001817) 295 223 - Val CAC [SRA]
>SRA1051278 SRR035096.127483 454 Sequencing (SRP001817) 145 73 - Val CAC [SRA]
>SRA1051311 SRR035096.135275 454 Sequencing (SRP001817) 219 291 + Val CAC [SRA]
>WENV074520 AACY023980842 Marine microbial communities from Global Ocean Sampling (GOS) 467 392 - Val CAC [ENA]
Identical group No.548499 (3 seq.)
>WENV170613374 FUWD012800251 [FUWD] metagenome; unknown 175 250 + Val CAC [ENA] ¢þ
>SRA1017567 SRR035082.161991 454 Sequencing (SRP001803) 74 149 + Val CAC [SRA]
>SRA1048613 SRR035094.209863 454 Sequencing (SRP001815) 207 132 - Val CAC [SRA]
Identical group No.612532 (1 seq.)
>SRA1047992 SRR035094.84680 454 Sequencing (SRP001815) 390 318 - Val CAC [SRA]
Identical group No.612542 (1 seq.)
>SRA1048116 SRR035094.112727 454 Sequencing (SRP001815) 233 158 - Val CAC [SRA]
Identical group No.612558 (1 seq.)
>SRA1048393 SRR035094.163564 454 Sequencing (SRP001815) 140 65 - Val CAC [SRA]
Identical group No.612586 (1 seq.)
>SRA1048763 SRR035094.243368 454 Sequencing (SRP001815) 37 112 + Val CAC [SRA]
Identical group No.612605 (1 seq.)
>SRA1048998 SRR035094.307945 454 Sequencing (SRP001815) 241 166 - Val CAC [SRA]
Identical group No.654236 (6 seq.)
>WENV170612724 FUWD012670632 [FUWD] metagenome; unknown 314 240 - Val CAC [ENA] ¢þ
>SRA1025482 SRR035085.22146 454 Sequencing (SRP001806) 252 178 - Val CAC [SRA]
>SRA1025505 SRR035085.27239 454 Sequencing (SRP001806) 252 178 - Val CAC [SRA]
>SRA1025598 SRR035085.45204 454 Sequencing (SRP001806) 253 179 - Val CAC [SRA]
>SRA1047818 SRR035094.46785 454 Sequencing (SRP001815) 460 386 - Val CAC [SRA]
>SRA1047950 SRR035094.74214 454 Sequencing (SRP001815) 324 250 - Val CAC [SRA]
Identical group No.654281 (6 seq.)
>WENV170611852 FUWD012419471 [FUWD] metagenome; unknown 82 8 - Val CAC [ENA] ¢þ
>SRA1025823 SRR035085.89239 454 Sequencing (SRP001806) 201 127 - Val CAC [SRA]
>SRA1025938 SRR035085.113470 454 Sequencing (SRP001806) 201 127 - Val CAC [SRA]
>SRA1034665 SRR035089.147379 454 Sequencing (SRP001810) 424 350 - Val CAC [SRA]
>SRA1036349 SRR035089.500246 454 Sequencing (SRP001810) 157 231 + Val CAC [SRA]
>SRA1048136 SRR035094.114799 454 Sequencing (SRP001815) 285 211 - Val CAC [SRA]
Identical group No.654357 (30 seq.)
>W1710821930 LKUC01000050 Thermodesulfobacteriota Smithella sp. SDB [LKUC] 4773 4847 + Val CAC [ENA] ¡û
>W141137378 AWGX01000938 Thermodesulfobacteriota Smithella sp. ME-1 [AWGX] 5970 6044 + Val CAC [ENA] ¡û
>W141170189 AXXK01000323 Unclassified delta proteobacterium PSCGC 5451 [AXXK] 8058 8132 + Val CAC [ENA] ¡û
>W141170258 AXXP01000073 Unclassified delta proteobacterium JGI 0000059-K16 [AXXP] 1891 1817 - Val CAC [ENA] ¡û
>WENV183513773 OMKS01007768 [OMKS] sediment metagenome; hot spring sediment 4141 4215 + Val CAC [ENA] ¢þ
>WENV183516612 OMKS01216868 [OMKS] sediment metagenome; hot spring sediment 506 432 - Val CAC [ENA] ¢þ
>ENV08002448 ABPU01006830 microbial mat metagenome; Guerrero Negro Hypersaline Mat 06; altitude 310m AMSL; sample depth 1m below water level, 5-6mm depth into the mat 408 334 - Val CAC [ENA] ¡û
>WENV170607858 FUWD010861916 [FUWD] metagenome; unknown 197 123 - Val CAC [ENA] ¢þ
>WENV170624135 FUWD013175560 [FUWD] metagenome; unknown 1338 1264 - Val CAC [ENA] ¢þ
>WENV170632417 FUWD013381702 [FUWD] metagenome; unknown 1338 1264 - Val CAC [ENA] ¢þ
>WENV170715247 LNQE01001013 [LNQE] hydrocarbon metagenome; hydrocarbon-contaminated ditch 8671 8745 + Val CAC [ENA] ¢þ
>WENV170973781 MTKY01050969 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 1767 1693 - Val CAC [ENA] ¢þ
>W141812377 JQDQ01000049 Thermodesulfobacteriota Smithella sp. SCADC [JQDQ] 5348 5422 + Val CAC [ENA] ¡û
>W141812378 JQDQ01000050 Thermodesulfobacteriota Smithella sp. SCADC [JQDQ] 5365 5439 + Val CAC [ENA] ¡û
>SRA1026386 SRR035085.198496 454 Sequencing (SRP001806) 207 133 - Val CAC [SRA]
>SRA1029185 SRR035087.88686 454 Sequencing (SRP001808) 334 260 - Val CAC [SRA]
>SRA1030032 SRR035087.218720 454 Sequencing (SRP001808) 114 188 + Val CAC [SRA]
>SRA1030296 SRR035087.257752 454 Sequencing (SRP001808) 455 381 - Val CAC [SRA]
>SRA1030336 SRR035087.264996 454 Sequencing (SRP001808) 186 112 - Val CAC [SRA]
>SRA1030694 SRR035087.315569 454 Sequencing (SRP001808) 186 112 - Val CAC [SRA]
>SRA1030950 SRR035087.353638 454 Sequencing (SRP001808) 488 414 - Val CAC [SRA]
>SRA1031376 SRR035087.421123 454 Sequencing (SRP001808) 317 243 - Val CAC [SRA]
>SRA1031620 SRR035087.461459 454 Sequencing (SRP001808) 38 112 + Val CAC [SRA]
>SRA1034572 SRR035089.126263 454 Sequencing (SRP001810) 21 95 + Val CAC [SRA]
>SRA1035745 SRR035089.366907 454 Sequencing (SRP001810) 103 29 - Val CAC [SRA]
>SRA1036449 SRR035089.525434 454 Sequencing (SRP001810) 2 76 + Val CAC [SRA]
>SRA1048300 SRR035094.141627 454 Sequencing (SRP001815) 499 425 - Val CAC [SRA]
>SRA1048429 SRR035094.171662 454 Sequencing (SRP001815) 116 42 - Val CAC [SRA]
>W1511185618 JMED01000429 Thermodesulfobacteriota Smithella sp. SC_K08D17 [JMED] 3428 3354 - Val CAC [ENA] ¡û
>W1610685892 LKUC01000050 Thermodesulfobacteriota Smithella sp. SDB [LKUC] 4773 4847 + Val CAC [ENA] ¡û
Identical group No.654437 (13 seq.)
>WENV170619774 FUWD013020915 [FUWD] metagenome; unknown 1025 1099 + Val CAC [ENA] ¢þ
>WENV170627893 FUWD013239179 [FUWD] metagenome; unknown 1025 1099 + Val CAC [ENA] ¢þ
>WENV170698755 LGVF01407064 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 203 277 + Val CAC [ENA] ¢þ
>SRA1032462 SRR035088.17597 454 Sequencing (SRP001809) 134 208 + Val CAC [SRA]
>SRA1032750 SRR035088.94495 454 Sequencing (SRP001809) 262 336 + Val CAC [SRA]
>SRA1033073 SRR035088.167279 454 Sequencing (SRP001809) 114 188 + Val CAC [SRA]
>SRA1033293 SRR035088.216778 454 Sequencing (SRP001809) 73 1 - Val CAC [SRA]
>SRA1033637 SRR035088.309189 454 Sequencing (SRP001809) 164 90 - Val CAC [SRA]
>SRA1034369 SRR035089.70578 454 Sequencing (SRP001810) 154 80 - Val CAC [SRA]
>SRA1035193 SRR035089.256865 454 Sequencing (SRP001810) 1 75 + Val CAC [SRA]
>SRA1048464 SRR035094.178621 454 Sequencing (SRP001815) 508 434 - Val CAC [SRA]
>SRA1048559 SRR035094.198473 454 Sequencing (SRP001815) 155 81 - Val CAC [SRA]
>SRA1049748 SRR035095.133589 454 Sequencing (SRP001816) 147 221 + Val CAC [SRA]
Identical group No.654441 (10 seq.)
>WENV170625024 FUWD013190289 [FUWD] metagenome; unknown 621 547 - Val CAC [ENA] ¢þ
>WENV170633280 FUWD013393752 [FUWD] metagenome; unknown 621 547 - Val CAC [ENA] ¢þ
>SRA1032157 SRR035087.565287 454 Sequencing (SRP001808) 108 34 - Val CAC [SRA]
>SRA1033052 SRR035088.159593 454 Sequencing (SRP001809) 222 148 - Val CAC [SRA]
>SRA1034379 SRR035089.73699 454 Sequencing (SRP001810) 102 176 + Val CAC [SRA]
>SRA1037451 SRR035090.136769 454 Sequencing (SRP001811) 276 202 - Val CAC [SRA]
>SRA1037522 SRR035090.147178 454 Sequencing (SRP001811) 275 201 - Val CAC [SRA]
>SRA1038904 SRR035090.391426 454 Sequencing (SRP001811) 277 203 - Val CAC [SRA]
>SRA1047680 SRR035094.18768 454 Sequencing (SRP001815) 408 334 - Val CAC [SRA]
>SRA1048914 SRR035094.284836 454 Sequencing (SRP001815) 74 148 + Val CAC [SRA]
Identical group No.672517 (9 seq.)
>WENV170621988 FUWD013082450 [FUWD] metagenome; unknown 455 526 + Val CAC [ENA] ¢þ
>WENV170630184 FUWD013297758 [FUWD] metagenome; unknown 455 526 + Val CAC [ENA] ¢þ
>SRA1031061 SRR035087.366004 454 Sequencing (SRP001808) 77 148 + Val CAC [SRA]
>SRA1032545 SRR035088.43000 454 Sequencing (SRP001809) 152 223 + Val CAC [SRA]
>SRA1033226 SRR035088.200818 454 Sequencing (SRP001809) 160 231 + Val CAC [SRA]
>SRA1033941 SRR035088.416492 454 Sequencing (SRP001809) 160 231 + Val CAC [SRA]
>SRA1037143 SRR035090.81565 454 Sequencing (SRP001811) 311 382 + Val CAC [SRA]
>SRA1037403 SRR035090.129008 454 Sequencing (SRP001811) 310 381 + Val CAC [SRA]
>SRA1048167 SRR035094.121184 454 Sequencing (SRP001815) 213 142 - Val CAC [SRA]
Identical group No.711118 (2 seq.)
>WENV170612720 FUWD012668797 [FUWD] metagenome; unknown 129 55 - Val CAC [ENA] ¢þ
>SRA1047831 SRR035094.50490 454 Sequencing (SRP001815) 139 65 - Val CAC [SRA]
Identical group No.751692 (1 seq.)
>SRA1047940 SRR035094.71897 454 Sequencing (SRP001815) 315 241 - Val CAC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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