tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001815)

Anticodon = CGT

HIT: 25 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.415572 (1 seq.)
>SRA1048640 SRR035094.214560 454 Sequencing (SRP001815) 403 330 - Thr CGT [SRA]
Identical group No.415582 (1 seq.)
>SRA1048717 SRR035094.234272 454 Sequencing (SRP001815) 256 183 - Thr CGT [SRA]
Identical group No.415602 (1 seq.)
>SRA1049025 SRR035094.318145 454 Sequencing (SRP001815) 241 317 + Thr CGT [SRA]
Identical group No.453199 (30 seq.)
>W131216791 ATWD01000001 Acidobacteriota Acidobacteriaceae bacterium TAA 166 TAA166 [ATWD] 3106469 3106544 + Thr CGT [ENA] ¡û
>WENV170615854 FUWD012870435 [FUWD] metagenome; unknown 1030 955 - Thr CGT [ENA] ¢þ
>WENV170619764 FUWD013020663 [FUWD] metagenome; unknown 10639 10714 + Thr CGT [ENA] ¢þ
>WENV170627885 FUWD013238952 [FUWD] metagenome; unknown 10639 10714 + Thr CGT [ENA] ¢þ
>W141557286 JHVA01000001 Acidobacteriota Acidobacteriaceae bacterium KBS 146 KBS 146 [JHVA] 3698733 3698808 + Thr CGT [ENA] ¡û
>SRA1018082 SRR035082.237206 454 Sequencing (SRP001803) 300 375 + Thr CGT [SRA]
>SRA1025445 SRR035085.8024 454 Sequencing (SRP001806) 220 295 + Thr CGT [SRA]
>SRA1025494 SRR035085.24925 454 Sequencing (SRP001806) 36 111 + Thr CGT [SRA]
>SRA1025873 SRR035085.99388 454 Sequencing (SRP001806) 39 114 + Thr CGT [SRA]
>SRA1025904 SRR035085.105833 454 Sequencing (SRP001806) 39 114 + Thr CGT [SRA]
>SRA1025925 SRR035085.111110 454 Sequencing (SRP001806) 39 114 + Thr CGT [SRA]
>SRA1026704 SRR035085.265477 454 Sequencing (SRP001806) 41 116 + Thr CGT [SRA]
>SRA1026812 SRR035085.297665 454 Sequencing (SRP001806) 172 97 - Thr CGT [SRA]
>SRA1030236 SRR035087.247350 454 Sequencing (SRP001808) 234 159 - Thr CGT [SRA]
>SRA1030306 SRR035087.259780 454 Sequencing (SRP001808) 56 131 + Thr CGT [SRA]
>SRA1030668 SRR035087.311778 454 Sequencing (SRP001808) 25 100 + Thr CGT [SRA]
>SRA1030742 SRR035087.324151 454 Sequencing (SRP001808) 234 159 - Thr CGT [SRA]
>SRA1031082 SRR035087.370112 454 Sequencing (SRP001808) 50 125 + Thr CGT [SRA]
>SRA1031596 SRR035087.456542 454 Sequencing (SRP001808) 25 100 + Thr CGT [SRA]
>SRA1033703 SRR035088.329437 454 Sequencing (SRP001809) 228 303 + Thr CGT [SRA]
>SRA1034938 SRR035089.202767 454 Sequencing (SRP001810) 125 200 + Thr CGT [SRA]
>SRA1035533 SRR035089.325960 454 Sequencing (SRP001810) 127 202 + Thr CGT [SRA]
>SRA1035850 SRR035089.388537 454 Sequencing (SRP001810) 128 203 + Thr CGT [SRA]
>SRA1036387 SRR035089.508669 454 Sequencing (SRP001810) 150 75 - Thr CGT [SRA]
>SRA1047782 SRR035094.41030 454 Sequencing (SRP001815) 501 426 - Thr CGT [SRA]
>SRA1048079 SRR035094.104499 454 Sequencing (SRP001815) 233 158 - Thr CGT [SRA]
>SRA1048290 SRR035094.140539 454 Sequencing (SRP001815) 189 264 + Thr CGT [SRA]
>SRA1048488 SRR035094.185236 454 Sequencing (SRP001815) 53 128 + Thr CGT [SRA]
>SRA1049649 SRR035095.110989 454 Sequencing (SRP001816) 183 108 - Thr CGT [SRA]
>SRA1050214 SRR035095.213942 454 Sequencing (SRP001816) 152 227 + Thr CGT [SRA]
Identical group No.453314 (9 seq.)
>WENV170612347 FUWD012584029 [FUWD] metagenome; unknown 347 275 - Thr CGT [ENA] ¢þ
>SRA1025932 SRR035085.112892 454 Sequencing (SRP001806) 226 298 + Thr CGT [SRA]
>SRA1029606 SRR035087.150591 454 Sequencing (SRP001808) 116 188 + Thr CGT [SRA]
>SRA1034714 SRR035089.158466 454 Sequencing (SRP001810) 5 80 + Thr CGT [SRA]
>SRA1035363 SRR035089.290617 454 Sequencing (SRP001810) 151 223 + Thr CGT [SRA]
>SRA1047894 SRR035094.63015 454 Sequencing (SRP001815) 402 330 - Thr CGT [SRA]
>SRA1047919 SRR035094.68077 454 Sequencing (SRP001815) 403 331 - Thr CGT [SRA]
>SRA1048127 SRR035094.113477 454 Sequencing (SRP001815) 403 331 - Thr CGT [SRA]
>SRA1048930 SRR035094.288863 454 Sequencing (SRP001815) 403 331 - Thr CGT [SRA]
Identical group No.453399 (3 seq.)
>WENV170611889 FUWD012430299 [FUWD] metagenome; unknown 127 199 + Thr CGT [ENA] ¢þ
>SRA1026482 SRR035085.213861 454 Sequencing (SRP001806) 179 251 + Thr CGT [SRA]
>SRA1048756 SRR035094.241852 454 Sequencing (SRP001815) 310 238 - Thr CGT [SRA]
Identical group No.453534 (15 seq.)
>WENV170618323 FUWD012962665 [FUWD] metagenome; unknown 362 437 + Thr CGT [ENA] ¢þ
>WENV170625664 FUWD013202836 [FUWD] metagenome; unknown 2286 2361 + Thr CGT [ENA] ¢þ
>WENV170633888 FUWD013404910 [FUWD] metagenome; unknown 2286 2361 + Thr CGT [ENA] ¢þ
>SRA1029895 SRR035087.197762 454 Sequencing (SRP001808) 259 184 - Thr CGT [SRA]
>SRA1030651 SRR035087.310071 454 Sequencing (SRP001808) 131 206 + Thr CGT [SRA]
>SRA1032013 SRR035087.531723 454 Sequencing (SRP001808) 76 1 - Thr CGT [SRA]
>SRA1033018 SRR035088.152567 454 Sequencing (SRP001809) 316 241 - Thr CGT [SRA]
>SRA1034516 SRR035089.114086 454 Sequencing (SRP001810) 73 148 + Thr CGT [SRA]
>SRA1034793 SRR035089.174696 454 Sequencing (SRP001810) 73 148 + Thr CGT [SRA]
>SRA1035386 SRR035089.295057 454 Sequencing (SRP001810) 158 233 + Thr CGT [SRA]
>SRA1035554 SRR035089.329873 454 Sequencing (SRP001810) 73 148 + Thr CGT [SRA]
>SRA1035718 SRR035089.360665 454 Sequencing (SRP001810) 233 158 - Thr CGT [SRA]
>SRA1035742 SRR035089.366716 454 Sequencing (SRP001810) 324 249 - Thr CGT [SRA]
>SRA1048051 SRR035094.98825 454 Sequencing (SRP001815) 295 370 + Thr CGT [SRA]
>SRA1048912 SRR035094.284377 454 Sequencing (SRP001815) 92 167 + Thr CGT [SRA]
Identical group No.453828 (34 seq.)
>W131193774 ASPA01000063 Atribacterota Atribacteria bacterium SCGC AAA255-G05 OP9 bacterium SCGC AAA255-G05 [ASPA] 9464 9539 + Thr CGT [ENA] ¡û
>W131193778 ASPA01000078 Atribacterota Atribacteria bacterium SCGC AAA255-G05 OP9 bacterium SCGC AAA255-G05 [ASPA] 8565 8490 - Thr CGT [ENA] ¡û
>W131193806 ASPC01000049 Atribacterota Atribacteria bacterium SCGC AAA255-N14 OP9 bacterium SCGC AAA255-N14 [ASPC] 14074 13999 - Thr CGT [ENA] ¡û
>W1711398143 MEYG01000020 Atribacterota Candidatus Atribacteria bacterium RBG_16_35_8 [MEYG] 4823 4748 - Thr CGT [ENA] ¡û
>WENV183514990 OMKS01040909 [OMKS] sediment metagenome; hot spring sediment 1389 1314 - Thr CGT [ENA] ¢þ
>WENV170017351 BART01018289 [BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula 481 556 + Thr CGT [ENA] ¢þ
>WENV170017483 BART01032762 [BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula 313 238 - Thr CGT [ENA] ¢þ
>WENV170017488 BART01032843 [BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula 112 37 - Thr CGT [ENA] ¢þ
>WENV170017495 BART01033464 [BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula 424 349 - Thr CGT [ENA] ¢þ
>WENV170017826 BARU01030078 [BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula 635 710 + Thr CGT [ENA] ¢þ
>WENV170018246 BARV01030253 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 650 725 + Thr CGT [ENA] ¢þ
>WENV170018270 BARV01033182 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 376 301 - Thr CGT [ENA] ¢þ
>WENV170018442 BARW01018186 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 523 598 + Thr CGT [ENA] ¢þ
>WENV170018461 BARW01021449 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 358 433 + Thr CGT [ENA] ¢þ
>WENV170018535 BARW01035487 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 455 380 - Thr CGT [ENA] ¢þ
>WENV170621361 FUWD013056610 [FUWD] metagenome; unknown 1979 2054 + Thr CGT [ENA] ¢þ
>WENV170621488 FUWD013060989 [FUWD] metagenome; unknown 1343 1268 - Thr CGT [ENA] ¢þ
>WENV170629540 FUWD013273014 [FUWD] metagenome; unknown 1979 2054 + Thr CGT [ENA] ¢þ
>WENV170629670 FUWD013277204 [FUWD] metagenome; unknown 1343 1268 - Thr CGT [ENA] ¢þ
>WENV170678046 LDZT01010682 [LDZT] terrestrial metagenome; oil reservoir sample SB1 83254 83329 + Thr CGT [ENA] ¢þ
>WENV170679157 LDZU01008740 [LDZU] terrestrial metagenome; oil reservoir sample SB2 102180 102105 - Thr CGT [ENA] ¢þ
>WENV170695177 LGVE01056762 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 688 763 + Thr CGT [ENA] ¢þ
>WENV170697146 LGVF01085647 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 1246 1321 + Thr CGT [ENA] ¢þ
>W1910702386 MEYH01000049 Atribacterota Candidatus Atribacteria bacterium RBG_19FT_COMBO_35_14 [MEYH] 20500 20575 + Thr CGT [ENA] ¡û
>W1910870300 NCRO01000026 Atribacterota Candidatus Atribacteria bacterium RS-JS1 [NCRO] 5639 5564 - Thr CGT [ENA] ¡û
>SRA1029287 SRR035087.103886 454 Sequencing (SRP001808) 157 82 - Thr CGT [SRA]
>SRA1029419 SRR035087.124804 454 Sequencing (SRP001808) 179 254 + Thr CGT [SRA]
>SRA1029891 SRR035087.197284 454 Sequencing (SRP001808) 98 23 - Thr CGT [SRA]
>SRA1030942 SRR035087.352622 454 Sequencing (SRP001808) 347 422 + Thr CGT [SRA]
>SRA1031010 SRR035087.359997 454 Sequencing (SRP001808) 277 202 - Thr CGT [SRA]
>SRA1032313 SRR035087.601435 454 Sequencing (SRP001808) 225 150 - Thr CGT [SRA]
>SRA1036274 SRR035089.485285 454 Sequencing (SRP001810) 452 377 - Thr CGT [SRA]
>SRA1048086 SRR035094.106460 454 Sequencing (SRP001815) 550 475 - Thr CGT [SRA]
>SRA1048134 SRR035094.114585 454 Sequencing (SRP001815) 556 481 - Thr CGT [SRA]
Identical group No.484231 (3 seq.)
>WENV170613345 FUWD012798045 [FUWD] metagenome; unknown 326 399 + Thr CGT [ENA] ¢þ
>SRA1029964 SRR035087.209089 454 Sequencing (SRP001808) 173 100 - Thr CGT [SRA]
>SRA1048519 SRR035094.192624 454 Sequencing (SRP001815) 295 222 - Thr CGT [SRA]
Identical group No.524864 (2 seq.)
>W1810400858 PYGL01000002 Alphaproteobacteria Sphingobium sp. AEW4 [PYGL] 175335 175260 - Thr CGT [ENA] ¡û
>SRA1047957 SRR035094.75574 454 Sequencing (SRP001815) 334 259 - Thr CGT [SRA]
Identical group No.547638 (2 seq.)
>WENV170602341 FUWD010228946 [FUWD] metagenome; unknown 9 81 + Thr CGT [ENA] ¢þ
>SRA1048802 SRR035094.252109 454 Sequencing (SRP001815) 68 140 + Thr CGT [SRA]
Identical group No.612508 (1 seq.)
>SRA1047642 SRR035094.4323 454 Sequencing (SRP001815) 22 95 + Thr CGT [SRA]
Identical group No.612519 (1 seq.)
>SRA1047777 SRR035094.39703 454 Sequencing (SRP001815) 122 194 + Thr CGT [SRA]
Identical group No.612524 (1 seq.)
>SRA1047845 SRR035094.52542 454 Sequencing (SRP001815) 237 162 - Thr CGT [SRA]
Identical group No.612539 (1 seq.)
>SRA1048062 SRR035094.100967 454 Sequencing (SRP001815) 445 373 - Thr CGT [SRA]
Identical group No.612601 (1 seq.)
>SRA1048963 SRR035094.298087 454 Sequencing (SRP001815) 305 231 - Thr CGT [SRA]
Identical group No.612606 (1 seq.)
>SRA1049007 SRR035094.311969 454 Sequencing (SRP001815) 363 288 - Thr CGT [SRA]
Identical group No.612613 (1 seq.)
>SRA1049009 SRR035094.313062 454 Sequencing (SRP001815) 166 94 - Thr CGT [SRA]
Identical group No.654404 (7 seq.)
>WENV170216926 CEPX01303413 [CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 317 245 - Thr CGT [ENA] ¢þ
>WENV170607868 FUWD010863124 [FUWD] metagenome; unknown 198 126 - Thr CGT [ENA] ¢þ
>SRA1019788 SRR035082.531150 454 Sequencing (SRP001803) 218 144 - Thr CGT [SRA]
>SRA1026747 SRR035085.278777 454 Sequencing (SRP001806) 184 258 + Thr CGT [SRA]
>SRA1026780 SRR035085.288338 454 Sequencing (SRP001806) 130 58 - Thr CGT [SRA]
>SRA1047698 SRR035094.24076 454 Sequencing (SRP001815) 352 424 + Thr CGT [SRA]
>SRA1047795 SRR035094.42415 454 Sequencing (SRP001815) 269 341 + Thr CGT [SRA]
Identical group No.654405 (3 seq.)
>WENV170611909 FUWD012435966 [FUWD] metagenome; unknown 112 40 - Thr CGT [ENA] ¢þ
>SRA1026752 SRR035085.280182 454 Sequencing (SRP001806) 229 157 - Thr CGT [SRA]
>SRA1048397 SRR035094.164241 454 Sequencing (SRP001815) 122 50 - Thr CGT [SRA]
Identical group No.654584 (3 seq.)
>WENV170612322 FUWD012573993 [FUWD] metagenome; unknown 187 113 - Thr CGT [ENA] ¢þ
>SRA1035958 SRR035089.412876 454 Sequencing (SRP001810) 331 257 - Thr CGT [SRA]
>SRA1048726 SRR035094.235630 454 Sequencing (SRP001815) 157 231 + Thr CGT [SRA]
Identical group No.671273 (14 seq.)
>C171072593 CP018091 Cyanobacteriota Synechococcus sp. SynAce01 [CP018091] 1912158 1912087 - Thr CGT - ¡û
>w013564 AANO01000002 Cyanobacteriota Synechococcus sp. WH 5701 [AANO] 265983 266057 + Thr CGT [ENA] ¡û
>WENV170615093 FUWD012848807 [FUWD] metagenome; unknown 1764 1693 - Thr CGT [ENA] ¢þ
>W1911176864 NQKW01000004 Cyanobacteriota Synechococcus sp. 1G10 [NQKW] 200631 200702 + Thr CGT [ENA] ¡û
>W1911176899 NQKX01000001 Cyanobacteriota Synechococcus sp. MW101C3 [NQKX] 179424 179353 - Thr CGT [ENA] ¡û
>SRA1044350 SRR035092.264455 454 Sequencing (SRP001813) 140 69 - Thr CGT [SRA]
>SRA1044704 SRR035092.325372 454 Sequencing (SRP001813) 141 70 - Thr CGT [SRA]
>SRA1047986 SRR035094.82446 454 Sequencing (SRP001815) 271 342 + Thr CGT [SRA]
>SRA1048400 SRR035094.165398 454 Sequencing (SRP001815) 270 341 + Thr CGT [SRA]
>SRA1052326 SRR035098.183075 454 Sequencing (SRP001819) 356 427 + Thr CGT [SRA]
>SRA1052628 SRR035098.239329 454 Sequencing (SRP001819) 214 143 - Thr CGT [SRA]
>SRA1052973 SRR035098.310963 454 Sequencing (SRP001819) 465 394 - Thr CGT [SRA]
>SRA1053471 SRR035098.413062 454 Sequencing (SRP001819) 295 366 + Thr CGT [SRA]
>W1511600661 LBTY01000002 Unclassified candidate division TM6 bacterium GW2011_GWF2_38_10 [LBTY] 64405 64331 - Thr CGT [ENA] ¡û
Identical group No.686169 (10 seq.)
>W1711306900 MANV01000066 Thermodesulfobacteriota Desulfobacterales bacterium C00003104 [MANV] 3679 3750 + Thr CGT [ENA] ¡û
>W1711317651 MAXM01000180 Thermodesulfobacteriota Desulfobacterales bacterium C00003106 [MAXM] 1831 1902 + Thr CGT [ENA] ¡û
>WENV170612752 FUWD012679572 [FUWD] metagenome; unknown 149 223 + Thr CGT [ENA] ¢þ
>WENV170692838 LGOV01036471 [LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge 1366 1295 - Thr CGT [ENA] ¢þ
>WENV170693509 LGVC01016655 [LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive 3318 3389 + Thr CGT [ENA] ¢þ
>WENV170694054 LGVD01008076 [LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at 718 647 - Thr CGT [ENA] ¢þ
>WENV170694851 LGVE01012997 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 849 778 - Thr CGT [ENA] ¢þ
>WENV170696417 LGVF01016338 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 136 65 - Thr CGT [ENA] ¢þ
>SRA1048033 SRR035094.96535 454 Sequencing (SRP001815) 411 337 - Thr CGT [SRA]
>SRA1048574 SRR035094.202081 454 Sequencing (SRP001815) 163 237 + Thr CGT [SRA]
Identical group No.688976 (3 seq.)
>WENV180099289 NKAJ01001411 [NKAJ] marine sediment metagenome; Jiulong cold seep at northern South China Sea 1067 993 - Thr CGT [ENA] ¢þ
>WENV170696713 LGVF01044971 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 772 846 + Thr CGT [ENA] ¢þ
>SRA1047656 SRR035094.13206 454 Sequencing (SRP001815) 163 89 - Thr CGT [SRA]
Identical group No.751683 (1 seq.)
>SRA1047844 SRR035094.52513 454 Sequencing (SRP001815) 326 400 + Thr CGT [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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