tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001815)

Anticodon = CTC

HIT: 12 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.264004 (1 seq.)
>SRA1048321 SRR035094.146758 454 Sequencing (SRP001815) 508 434 - Glu CTC [SRA]
Identical group No.453215 (4 seq.)
>WENV170605048 FUWD010443699 [FUWD] metagenome; unknown 285 360 + Glu CTC [ENA] ¢þ
>SRA1025492 SRR035085.24301 454 Sequencing (SRP001806) 156 231 + Glu CTC [SRA]
>SRA1025495 SRR035085.24960 454 Sequencing (SRP001806) 286 211 - Glu CTC [SRA]
>SRA1047691 SRR035094.21848 454 Sequencing (SRP001815) 373 298 - Glu CTC [SRA]
Identical group No.547696 (3 seq.)
>WENV170603360 FUWD010305329 [FUWD] metagenome; unknown 610 685 + Glu CTC [ENA] ¢þ
>SRA1047991 SRR035094.83422 454 Sequencing (SRP001815) 84 11 - Glu CTC [SRA]
>SRA1049395 SRR035095.70031 454 Sequencing (SRP001816) 128 203 + Glu CTC [SRA]
Identical group No.612548 (1 seq.)
>SRA1048180 SRR035094.123554 454 Sequencing (SRP001815) 406 482 + Glu CTC [SRA]
Identical group No.654278 (13 seq.)
>WENV181412628 OGCK01003108 [OGCK] hot springs metagenome; hot spring sediment 2979 3053 + Glu CTC [ENA] ¢þ
>WENV183514318 OMKS01015995 [OMKS] sediment metagenome; hot spring sediment 3103 3029 - Glu CTC [ENA] ¢þ
>WENV170619704 FUWD013019407 [FUWD] metagenome; unknown 5232 5306 + Glu CTC [ENA] ¢þ
>WENV170627825 FUWD013237795 [FUWD] metagenome; unknown 5232 5306 + Glu CTC [ENA] ¢þ
>SRA1025802 SRR035085.86401 454 Sequencing (SRP001806) 227 301 + Glu CTC [SRA]
>SRA1030947 SRR035087.353014 454 Sequencing (SRP001808) 120 46 - Glu CTC [SRA]
>SRA1031109 SRR035087.375194 454 Sequencing (SRP001808) 94 20 - Glu CTC [SRA]
>SRA1048190 SRR035094.125621 454 Sequencing (SRP001815) 89 15 - Glu CTC [SRA]
>SRA1048357 SRR035094.155999 454 Sequencing (SRP001815) 516 442 - Glu CTC [SRA]
>SRA1048631 SRR035094.212526 454 Sequencing (SRP001815) 379 305 - Glu CTC [SRA]
>SRA1049850 SRR035095.147453 454 Sequencing (SRP001816) 400 326 - Glu CTC [SRA]
>SRA1050150 SRR035095.201207 454 Sequencing (SRP001816) 401 327 - Glu CTC [SRA]
>SRA1050206 SRR035095.212049 454 Sequencing (SRP001816) 514 440 - Glu CTC [SRA]
Identical group No.654284 (10 seq.)
>WENV170598591 FUWD010040546 [FUWD] metagenome; unknown 321 395 + Glu CTC [ENA] ¢þ
>WENV170598592 FUWD010040550 [FUWD] metagenome; unknown 10 84 + Glu CTC [ENA] ¢þ
>WENV170616594 FUWD012893040 [FUWD] metagenome; unknown 471 397 - Glu CTC [ENA] ¢þ
>SRA1025834 SRR035085.91894 454 Sequencing (SRP001806) 223 149 - Glu CTC [SRA]
>SRA1026100 SRR035085.143267 454 Sequencing (SRP001806) 221 147 - Glu CTC [SRA]
>SRA1034596 SRR035089.131205 454 Sequencing (SRP001810) 323 397 + Glu CTC [SRA]
>SRA1035262 SRR035089.269882 454 Sequencing (SRP001810) 481 407 - Glu CTC [SRA]
>SRA1036298 SRR035089.490077 454 Sequencing (SRP001810) 129 55 - Glu CTC [SRA]
>SRA1036515 SRR035089.535963 454 Sequencing (SRP001810) 10 84 + Glu CTC [SRA]
>SRA1047731 SRR035094.31259 454 Sequencing (SRP001815) 285 211 - Glu CTC [SRA]
Identical group No.654334 (11 seq.)
>WENV170626729 FUWD013229137 [FUWD] metagenome; unknown 6667 6741 + Glu CTC [ENA] ¢þ
>WENV170629676 FUWD013277285 [FUWD] metagenome; unknown 9164 9238 + Glu CTC [ENA] ¢þ
>SRA1018606 SRR035082.320645 454 Sequencing (SRP001803) 223 297 + Glu CTC [SRA]
>SRA1026222 SRR035085.165819 454 Sequencing (SRP001806) 226 300 + Glu CTC [SRA]
>SRA1026255 SRR035085.172990 454 Sequencing (SRP001806) 226 300 + Glu CTC [SRA]
>SRA1032115 SRR035087.555403 454 Sequencing (SRP001808) 232 306 + Glu CTC [SRA]
>SRA1032632 SRR035088.67648 454 Sequencing (SRP001809) 40 114 + Glu CTC [SRA]
>SRA1034123 SRR035088.498464 454 Sequencing (SRP001809) 169 243 + Glu CTC [SRA]
>SRA1043553 SRR035092.137396 454 Sequencing (SRP001813) 189 263 + Glu CTC [SRA]
>SRA1047824 SRR035094.48858 454 Sequencing (SRP001815) 356 430 + Glu CTC [SRA]
>SRA1048978 SRR035094.301169 454 Sequencing (SRP001815) 182 108 - Glu CTC [SRA]
Identical group No.654599 (27 seq.)
>WENV170626768 FUWD013229350 [FUWD] metagenome; unknown 2293 2367 + Glu CTC [ENA] ¢þ
>SRA1017537 SRR035082.158122 454 Sequencing (SRP001803) 71 145 + Glu CTC [SRA]
>SRA1019306 SRR035082.433029 454 Sequencing (SRP001803) 127 198 + Glu CTC [SRA]
>SRA1036177 SRR035089.463450 454 Sequencing (SRP001810) 136 210 + Glu CTC [SRA]
>SRA1036623 SRR035089.565542 454 Sequencing (SRP001810) 254 180 - Glu CTC [SRA]
>SRA1040560 SRR035091.115345 454 Sequencing (SRP001812) 371 297 - Glu CTC [SRA]
>SRA1040982 SRR035091.177378 454 Sequencing (SRP001812) 31 105 + Glu CTC [SRA]
>SRA1041075 SRR035091.192644 454 Sequencing (SRP001812) 143 217 + Glu CTC [SRA]
>SRA1041829 SRR035091.301289 454 Sequencing (SRP001812) 18 92 + Glu CTC [SRA]
>SRA1042238 SRR035091.360315 454 Sequencing (SRP001812) 230 156 - Glu CTC [SRA]
>SRA1042439 SRR035091.386795 454 Sequencing (SRP001812) 95 21 - Glu CTC [SRA]
>SRA1042825 SRR035091.451214 454 Sequencing (SRP001812) 151 77 - Glu CTC [SRA]
>SRA1042898 SRR035091.463246 454 Sequencing (SRP001812) 351 277 - Glu CTC [SRA]
>SRA1043171 SRR035092.63100 454 Sequencing (SRP001813) 166 240 + Glu CTC [SRA]
>SRA1048461 SRR035094.178337 454 Sequencing (SRP001815) 22 96 + Glu CTC [SRA]
>SRA1048582 SRR035094.203213 454 Sequencing (SRP001815) 169 243 + Glu CTC [SRA]
>SRA1048947 SRR035094.295108 454 Sequencing (SRP001815) 254 328 + Glu CTC [SRA]
>SRA1048965 SRR035094.298170 454 Sequencing (SRP001815) 255 329 + Glu CTC [SRA]
>SRA1049717 SRR035095.124322 454 Sequencing (SRP001816) 397 323 - Glu CTC [SRA]
>SRA1049941 SRR035095.163761 454 Sequencing (SRP001816) 252 326 + Glu CTC [SRA]
>SRA1049970 SRR035095.170264 454 Sequencing (SRP001816) 117 43 - Glu CTC [SRA]
>SRA1050172 SRR035095.205889 454 Sequencing (SRP001816) 117 43 - Glu CTC [SRA]
>SRA1050396 SRR035095.252523 454 Sequencing (SRP001816) 117 43 - Glu CTC [SRA]
>SRA1050481 SRR035095.271638 454 Sequencing (SRP001816) 200 126 - Glu CTC [SRA]
>SRA1050530 SRR035095.283863 454 Sequencing (SRP001816) 117 43 - Glu CTC [SRA]
>SRA1050547 SRR035095.289269 454 Sequencing (SRP001816) 117 43 - Glu CTC [SRA]
>SRA1050646 SRR035095.312598 454 Sequencing (SRP001816) 117 43 - Glu CTC [SRA]
Identical group No.681553 (2 seq.)
>WENV183512439 OMKS01000479 [OMKS] sediment metagenome; hot spring sediment 36079 36153 + Glu CTC [ENA] ¢þ
>SRA1048545 SRR035094.197029 454 Sequencing (SRP001815) 182 256 + Glu CTC [SRA]
Identical group No.710662 (2 seq.)
>WENV170605100 FUWD010449297 [FUWD] metagenome; unknown 675 601 - Glu CTC [ENA] ¢þ
>SRA1048291 SRR035094.140707 454 Sequencing (SRP001815) 293 219 - Glu CTC [SRA]
Identical group No.710785 (6 seq.)
>WENV170607832 FUWD010859498 [FUWD] metagenome; unknown 80 6 - Glu CTC [ENA] ¢þ
>SRA1033678 SRR035088.321108 454 Sequencing (SRP001809) 338 264 - Glu CTC [SRA]
>SRA1047996 SRR035094.84833 454 Sequencing (SRP001815) 417 343 - Glu CTC [SRA]
>SRA1048423 SRR035094.170493 454 Sequencing (SRP001815) 420 346 - Glu CTC [SRA]
>SRA1048562 SRR035094.199087 454 Sequencing (SRP001815) 411 337 - Glu CTC [SRA]
>SRA1053064 SRR035098.328902 454 Sequencing (SRP001819) 366 292 - Glu CTC [SRA]
Identical group No.711162 (2 seq.)
>WENV170613078 FUWD012779358 [FUWD] metagenome; unknown 96 170 + Glu CTC [ENA] ¢þ
>SRA1047783 SRR035094.41080 454 Sequencing (SRP001815) 218 292 + Glu CTC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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