tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001815)

Anticodon = TAC

HIT: 19 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.240986 (20 seq.)
>W1711120837 LUHG01000039 Bacteroidota Hydrotalea flava [LUHG] 39130 39207 + Val TAC [ENA] ¡û
>W1711385738 MEEN01000028 Bacteroidota Niastella sp. SCN 39-18 [MEEN] 81013 80938 - Val TAC [ENA] ¡û
>W1711503759 MKTX01000003 Bacteroidota Sphingobacteriales bacterium 39-19 [MKTX] 107519 107444 - Val TAC [ENA] ¡û
>WENV180100580 OAOO01011558 [OAOO] marine metagenome; ENVO:00002010 104 29 - Val TAC [ENA] ¢þ
>WENV180284181 OBID01019956 [OBID] metagenome; sludge 994 1069 + Val TAC [ENA] ¢þ
>WENV181169705 OEIV010007801 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 2339 2414 + Val TAC [ENA] ¢þ
>WENV183092319 OLKZ01000109 [OLKZ] soil metagenome; soil 129273 129198 - Val TAC [ENA] ¢þ
>WENV170009354 APMI01000104 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 1028224 1028301 + Val TAC [ENA] ¢þ
>WENV170010507 APMI01018975 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 13555 13480 - Val TAC [ENA] ¢þ
>WENV170551456 CXWJ01008304 [CXWJ] wastewater metagenome; activated sludge 1334 1257 - Val TAC [ENA] ¢þ
>WENV170558992 CXWL01104592 [CXWL] groundwater metagenome; biofilm material 1436 1359 - Val TAC [ENA] ¢þ
>WENV170650849 JRYE01030660 [JRYE] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 4 ppm DO 2714 2789 + Val TAC [ENA] ¢þ
>SRA1047757 SRR035094.36008 454 Sequencing (SRP001815) 236 313 + Val TAC [SRA]
>ENV09000395 ABSN01063164 Freshwater sediment metagenome lwFormaldehyde_C1 276 201 - Val TAC [ENA] ¡û
>C161092535 CP015971 Bacteroidota Arachidicoccus sp. BS20 [CP015971] 3351929 3352004 + Val TAC [Ensembl] ¡û
>W1610503558 FLNP01000044 Bacteroidota Hydrotalea flava [FLNP] 4218 4295 + Val TAC [ENA] ¡û
>W1610503569 FLNQ01000020 Bacteroidota Hydrotalea flava [FLNQ] 9823 9746 - Val TAC [ENA] ¡û
>W1610503600 FLNR01000076 Bacteroidota Hydrotalea flava [FLNR] 4858 4781 - Val TAC [ENA] ¡û
>W1610503631 FLNT01000060 Bacteroidota Hydrotalea flava [FLNT] 10357 10280 - Val TAC [ENA] ¡û
>W1610932034 LUHG01000039 Bacteroidota Hydrotalea flava [LUHG] 39130 39207 + Val TAC [ENA] ¡û
Identical group No.249662 (13 seq.)
>WENV180078344 MPMB02099948 [MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter 1720 1643 - Val TAC [ENA] ¢þ
>WENV183805418 PVBE011018182 [PVBE] marine metagenome; water 3998 4075 + Val TAC [ENA] ¢þ
>WENV170210484 CEPV01209320 [CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 304 227 - Val TAC [ENA] ¢þ
>WENV170396110 CEUC01182270 [CEUC] marine metagenome genome assembly TARA_137_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 108 31 - Val TAC [ENA] ¢þ
>WENV170399071 CEUD01336996 [CEUD] marine metagenome genome assembly TARA_137_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 203 280 + Val TAC [ENA] ¢þ
>WENV170536023 CEWP01139573 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1890 1813 - Val TAC [ENA] ¢þ
>WENV170571820 FLOH01000324 [FLOH] marine metagenome; water 116617 116694 + Val TAC [ENA] ¢þ
>WENV170619782 FUWD013021169 [FUWD] metagenome; unknown 5275 5198 - Val TAC [ENA] ¢þ
>WENV170627901 FUWD013239410 [FUWD] metagenome; unknown 5275 5198 - Val TAC [ENA] ¢þ
>SRA1032887 SRR035088.121941 454 Sequencing (SRP001809) 415 338 - Val TAC [SRA]
>SRA1033839 SRR035088.371768 454 Sequencing (SRP001809) 324 247 - Val TAC [SRA]
>SRA1033917 SRR035088.406686 454 Sequencing (SRP001809) 92 15 - Val TAC [SRA]
>SRA1048932 SRR035094.290430 454 Sequencing (SRP001815) 232 155 - Val TAC [SRA]
Identical group No.263997 (1 seq.)
>SRA1048084 SRR035094.106061 454 Sequencing (SRP001815) 44 119 + Val TAC [SRA]
Identical group No.272516 (13 seq.)
>WENV170620588 FUWD013034587 [FUWD] metagenome; unknown 1000 924 - Val TAC [ENA] ¢þ
>WENV170626722 FUWD013229103 [FUWD] metagenome; unknown 2197 2121 - Val TAC [ENA] ¢þ
>WENV170628728 FUWD013251961 [FUWD] metagenome; unknown 1000 924 - Val TAC [ENA] ¢þ
>WENV170629212 FUWD013264420 [FUWD] metagenome; unknown 6159 6083 - Val TAC [ENA] ¢þ
>SRA1017262 SRR035082.107261 454 Sequencing (SRP001803) 206 130 - Val TAC [SRA]
>SRA1018773 SRR035082.345574 454 Sequencing (SRP001803) 128 204 + Val TAC [SRA]
>SRA1030071 SRR035087.224304 454 Sequencing (SRP001808) 418 342 - Val TAC [SRA]
>SRA1034243 SRR035089.33842 454 Sequencing (SRP001810) 110 34 - Val TAC [SRA]
>SRA1040002 SRR035091.14592 454 Sequencing (SRP001812) 48 124 + Val TAC [SRA]
>SRA1041571 SRR035091.262568 454 Sequencing (SRP001812) 45 121 + Val TAC [SRA]
>SRA1043861 SRR035092.186949 454 Sequencing (SRP001813) 260 336 + Val TAC [SRA]
>SRA1044122 SRR035092.227343 454 Sequencing (SRP001813) 163 239 + Val TAC [SRA]
>SRA1047750 SRR035094.34837 454 Sequencing (SRP001815) 132 208 + Val TAC [SRA]
Identical group No.358765 (6 seq.)
>WENV170622499 FUWD013107285 [FUWD] metagenome; unknown 1202 1276 + Val TAC [ENA] ¢þ
>WENV170630723 FUWD013321613 [FUWD] metagenome; unknown 1202 1276 + Val TAC [ENA] ¢þ
>SRA1041492 SRR035091.249690 454 Sequencing (SRP001812) 72 146 + Val TAC [SRA]
>SRA1043560 SRR035092.138253 454 Sequencing (SRP001813) 397 471 + Val TAC [SRA]
>SRA1047635 SRR035094.473 454 Sequencing (SRP001815) 41 115 + Val TAC [SRA]
>SRA1047640 SRR035094.3810 454 Sequencing (SRP001815) 42 116 + Val TAC [SRA]
Identical group No.415544 (2 seq.)
>SRA1048108 SRR035094.110722 454 Sequencing (SRP001815) 160 84 - Val TAC [SRA]
>SRA1048213 SRR035094.129582 454 Sequencing (SRP001815) 160 84 - Val TAC [SRA]
Identical group No.415556 (1 seq.)
>SRA1048304 SRR035094.144299 454 Sequencing (SRP001815) 102 29 - Val TAC [SRA]
Identical group No.415569 (1 seq.)
>SRA1048575 SRR035094.202170 454 Sequencing (SRP001815) 327 251 - Val TAC [SRA]
Identical group No.453378 (30 seq.)
>W131157557 AQSK01000195 Unclassified Cloacimonetes bacterium SCGC AAA252-E13 KSB1 bacterium SCGC AAA252-E13 [AQSK] 43905 43980 + Val TAC [ENA] ¡û
>W131157602 AQSM01000006 Unclassified Cloacimonetes bacterium SCGC AAA252-N14 KSB1 bacterium SCGC AAA252-N14 [AQSM] 1587 1662 + Val TAC [ENA] ¡û
>W131157675 AQSO01000151 Unclassified Cloacimonetes bacterium SCGC AAA252-D03 KSB1 bacterium SCGC AAA252-D03 [AQSO] 21101 21176 + Val TAC [ENA] ¡û
>W131192116 ASKN01000008 Unclassified Cloacimonetes bacterium SCGC AAA252-F02 KSB1 bacterium SCGC AAA252-F02 [ASKN] 18275 18350 + Val TAC [ENA] ¡û
>W131192156 ASKP01000044 Unclassified Cloacimonetes bacterium SCGC AAA252-L05 KSB1 bacterium SCGC AAA252-L05 [ASKP] 7837 7762 - Val TAC [ENA] ¡û
>W131192169 ASKQ01000018 Unclassified Cloacimonetes bacterium SCGC AAA252-O17 KSB1 bacterium SCGC AAA252-O17 [ASKQ] 7893 7818 - Val TAC [ENA] ¡û
>W131192958 ASNH01000106 Unclassified Cloacimonetes bacterium SCGC AAA255-C20 KSB1 bacterium SCGC AAA255-C20 [ASNH] 1475 1550 + Val TAC [ENA] ¡û
>W131192998 ASNI01000079 Unclassified Cloacimonetes bacterium SCGC AAA252-N17 KSB1 bacterium SCGC AAA252-N17 [ASNI] 1590 1665 + Val TAC [ENA] ¡û
>W131193019 ASNK01000003 Unclassified Cloacimonetes bacterium SCGC AAA252-E20 KSB1 bacterium SCGC AAA252-E20 [ASNK] 32366 32441 + Val TAC [ENA] ¡û
>W131193091 ASNN01000068 Unclassified Cloacimonetes bacterium SCGC AAA252-I11 KSB1 bacterium SCGC AAA252-I11 [ASNN] 1566 1641 + Val TAC [ENA] ¡û
>W131193110 ASNO01000013 Unclassified Cloacimonetes bacterium SCGC AAA252-I16 KSB1 bacterium SCGC AAA252-I16 [ASNO] 44498 44573 + Val TAC [ENA] ¡û
>W131193165 ASNS01000004 Unclassified Cloacimonetes bacterium SCGC AAA252-P02 KSB1 bacterium SCGC AAA252-P02 [ASNS] 23944 23869 - Val TAC [ENA] ¡û
>W131193188 ASNT01000022 Unclassified Cloacimonetes bacterium SCGC AAA252-P10 KSB1 bacterium SCGC AAA252-P10 [ASNT] 34212 34287 + Val TAC [ENA] ¡û
>W141139677 AWNX01000009 Unclassified Cloacimonetes bacterium JGI OTU-1 [AWNX] 7914 7839 - Val TAC [ENA] ¡û
>W141139722 AWNY01000029 Unclassified Cloacimonetes bacterium JGI OTU-2 [AWNY] 21101 21176 + Val TAC [ENA] ¡û
>WENV170624916 FUWD013188751 [FUWD] metagenome; unknown 1566 1491 - Val TAC [ENA] ¢þ
>WENV170633175 FUWD013392462 [FUWD] metagenome; unknown 1566 1491 - Val TAC [ENA] ¢þ
>SRA1026317 SRR035085.184943 454 Sequencing (SRP001806) 33 108 + Val TAC [SRA]
>SRA1026457 SRR035085.210410 454 Sequencing (SRP001806) 164 89 - Val TAC [SRA]
>SRA1026719 SRR035085.270427 454 Sequencing (SRP001806) 123 198 + Val TAC [SRA]
>SRA1029050 SRR035087.65337 454 Sequencing (SRP001808) 129 54 - Val TAC [SRA]
>SRA1029259 SRR035087.98902 454 Sequencing (SRP001808) 128 53 - Val TAC [SRA]
>SRA1029402 SRR035087.121944 454 Sequencing (SRP001808) 130 55 - Val TAC [SRA]
>SRA1031455 SRR035087.432889 454 Sequencing (SRP001808) 54 129 + Val TAC [SRA]
>SRA1033443 SRR035088.258758 454 Sequencing (SRP001809) 296 371 + Val TAC [SRA]
>SRA1034277 SRR035089.47020 454 Sequencing (SRP001810) 79 4 - Val TAC [SRA]
>SRA1034848 SRR035089.185508 454 Sequencing (SRP001810) 428 353 - Val TAC [SRA]
>SRA1036103 SRR035089.446336 454 Sequencing (SRP001810) 93 18 - Val TAC [SRA]
>SRA1036293 SRR035089.489104 454 Sequencing (SRP001810) 94 19 - Val TAC [SRA]
>SRA1048394 SRR035094.163878 454 Sequencing (SRP001815) 133 58 - Val TAC [SRA]
Identical group No.453435 (4 seq.)
>WENV170598501 FUWD010037560 [FUWD] metagenome; unknown 321 246 - Val TAC [ENA] ¢þ
>SRA1026711 SRR035085.267784 454 Sequencing (SRP001806) 338 263 - Val TAC [SRA]
>SRA1034581 SRR035089.128932 454 Sequencing (SRP001810) 201 126 - Val TAC [SRA]
>SRA1047858 SRR035094.56524 454 Sequencing (SRP001815) 90 165 + Val TAC [SRA]
Identical group No.453574 (6 seq.)
>WENV170615641 FUWD012863458 [FUWD] metagenome; unknown 628 553 - Val TAC [ENA] ¢þ
>WENV170615645 FUWD012863459 [FUWD] metagenome; unknown 185 110 - Val TAC [ENA] ¢þ
>SRA1034711 SRR035089.157784 454 Sequencing (SRP001810) 178 253 + Val TAC [SRA]
>SRA1035419 SRR035089.301449 454 Sequencing (SRP001810) 396 321 - Val TAC [SRA]
>SRA1035900 SRR035089.399348 454 Sequencing (SRP001810) 88 163 + Val TAC [SRA]
>SRA1048652 SRR035094.216719 454 Sequencing (SRP001815) 400 325 - Val TAC [SRA]
Identical group No.453804 (8 seq.)
>WENV170608064 FUWD010888519 [FUWD] metagenome; unknown 88 161 + Val TAC [ENA] ¢þ
>SRA1029255 SRR035087.98626 454 Sequencing (SRP001808) 294 366 + Val TAC [SRA]
>SRA1032457 SRR035088.16341 454 Sequencing (SRP001809) 221 146 - Val TAC [SRA]
>SRA1032745 SRR035088.93182 454 Sequencing (SRP001809) 390 317 - Val TAC [SRA]
>SRA1032981 SRR035088.143263 454 Sequencing (SRP001809) 68 143 + Val TAC [SRA]
>SRA1036130 SRR035089.450854 454 Sequencing (SRP001810) 88 161 + Val TAC [SRA]
>SRA1042946 SRR035091.471766 454 Sequencing (SRP001812) 401 326 - Val TAC [SRA]
>SRA1048235 SRR035094.131924 454 Sequencing (SRP001815) 126 54 - Val TAC [SRA]
Identical group No.612529 (1 seq.)
>SRA1047938 SRR035094.71094 454 Sequencing (SRP001815) 219 144 - Val TAC [SRA]
Identical group No.612549 (1 seq.)
>SRA1048184 SRR035094.123924 454 Sequencing (SRP001815) 143 68 - Val TAC [SRA]
Identical group No.612575 (1 seq.)
>SRA1048664 SRR035094.219985 454 Sequencing (SRP001815) 138 63 - Val TAC [SRA]
Identical group No.612596 (1 seq.)
>SRA1048905 SRR035094.281332 454 Sequencing (SRP001815) 88 13 - Val TAC [SRA]
Identical group No.654520 (3 seq.)
>SRA1035294 SRR035089.277527 454 Sequencing (SRP001810) 92 163 + Val TAC [SRA]
>SRA1037568 SRR035090.156541 454 Sequencing (SRP001811) 368 297 - Val TAC [SRA]
>SRA1048561 SRR035094.198590 454 Sequencing (SRP001815) 171 242 + Val TAC [SRA]
Identical group No.710829 (3 seq.)
>WENV170608219 FUWD010903465 [FUWD] metagenome; unknown 279 205 - Val TAC [ENA] ¢þ
>SRA1048798 SRR035094.250855 454 Sequencing (SRP001815) 291 217 - Val TAC [SRA]
>SRA1048900 SRR035094.280192 454 Sequencing (SRP001815) 286 212 - Val TAC [SRA]
Identical group No.788231 (12 seq.)
>WENV170617942 FUWD012944772 [FUWD] metagenome; unknown 531 461 - Val TAC [ENA] ¢þ
>WENV170625608 FUWD013201698 [FUWD] metagenome; unknown 271 201 - Val TAC [ENA] ¢þ
>SRA1017925 SRR035082.215257 454 Sequencing (SRP001803) 93 23 - Val TAC [SRA]
>SRA1032256 SRR035087.588772 454 Sequencing (SRP001808) 274 204 - Val TAC [SRA]
>SRA1043099 SRR035092.46693 454 Sequencing (SRP001813) 238 168 - Val TAC [SRA]
>SRA1043448 SRR035092.116719 454 Sequencing (SRP001813) 219 289 + Val TAC [SRA]
>SRA1043667 SRR035092.156930 454 Sequencing (SRP001813) 137 67 - Val TAC [SRA]
>SRA1043925 SRR035092.195280 454 Sequencing (SRP001813) 373 443 + Val TAC [SRA]
>SRA1047941 SRR035094.72011 454 Sequencing (SRP001815) 154 224 + Val TAC [SRA]
>SRA1048812 SRR035094.254991 454 Sequencing (SRP001815) 62 132 + Val TAC [SRA]
>SRA1048987 SRR035094.304239 454 Sequencing (SRP001815) 140 210 + Val TAC [SRA]
>SRA1049024 SRR035094.317896 454 Sequencing (SRP001815) 140 210 + Val TAC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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