tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001815)

Anticodon = TAG

HIT: 30 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.90548 (3 seq.)
>WENV170611994 FUWD012478378 [FUWD] metagenome; unknown 141 54 - Leu TAG [ENA] ¢þ
>SRA1029710 SRR035087.168748 454 Sequencing (SRP001808) 376 289 - Leu TAG [SRA]
>SRA1047962 SRR035094.76554 454 Sequencing (SRP001815) 222 135 - Leu TAG [SRA]
Identical group No.107020 (1 seq.)
>SRA1048904 SRR035094.281332 454 Sequencing (SRP001815) 464 379 - Leu TAG [SRA]
Identical group No.112540 (22 seq.)
>WENV170598627 FUWD010042447 [FUWD] metagenome; unknown 604 690 + Leu TAG [ENA] ¢þ
>WENV170598636 FUWD010042696 [FUWD] metagenome; unknown 409 323 - Leu TAG [ENA] ¢þ
>WENV170616313 FUWD012883945 [FUWD] metagenome; unknown 594 508 - Leu TAG [ENA] ¢þ
>WENV170626763 FUWD013229345 [FUWD] metagenome; unknown 204 118 - Leu TAG [ENA] ¢þ
>SRA1017308 SRR035082.116111 454 Sequencing (SRP001803) 138 52 - Leu TAG [SRA]
>SRA1018229 SRR035082.258708 454 Sequencing (SRP001803) 329 417 + Leu TAG [SRA]
>SRA1019537 SRR035082.473154 454 Sequencing (SRP001803) 192 106 - Leu TAG [SRA]
>SRA1026274 SRR035085.177458 454 Sequencing (SRP001806) 151 65 - Leu TAG [SRA]
>SRA1026304 SRR035085.182311 454 Sequencing (SRP001806) 153 67 - Leu TAG [SRA]
>SRA1026341 SRR035085.189235 454 Sequencing (SRP001806) 153 67 - Leu TAG [SRA]
>SRA1033395 SRR035088.244520 454 Sequencing (SRP001809) 151 65 - Leu TAG [SRA]
>SRA1034206 SRR035089.23405 454 Sequencing (SRP001810) 415 329 - Leu TAG [SRA]
>SRA1035340 SRR035089.286268 454 Sequencing (SRP001810) 47 133 + Leu TAG [SRA]
>SRA1040824 SRR035091.154482 454 Sequencing (SRP001812) 277 191 - Leu TAG [SRA]
>SRA1042207 SRR035091.356183 454 Sequencing (SRP001812) 73 159 + Leu TAG [SRA]
>SRA1047925 SRR035094.69375 454 Sequencing (SRP001815) 348 262 - Leu TAG [SRA]
>SRA1048986 SRR035094.303934 454 Sequencing (SRP001815) 38 124 + Leu TAG [SRA]
>SRA1049193 SRR035095.35596 454 Sequencing (SRP001816) 371 285 - Leu TAG [SRA]
>SRA1049567 SRR035095.96893 454 Sequencing (SRP001816) 189 103 - Leu TAG [SRA]
>SRA1049674 SRR035095.116429 454 Sequencing (SRP001816) 444 358 - Leu TAG [SRA]
>SRA1049719 SRR035095.125173 454 Sequencing (SRP001816) 267 353 + Leu TAG [SRA]
>SRA1050661 SRR035095.316937 454 Sequencing (SRP001816) 214 128 - Leu TAG [SRA]
Identical group No.112577 (7 seq.)
>WENV170626917 FUWD013230055 [FUWD] metagenome; unknown 13618 13534 - Leu TAG [ENA] ¢þ
>SRA1032539 SRR035088.41411 454 Sequencing (SRP001809) 209 125 - Leu TAG [SRA]
>SRA1034697 SRR035089.155391 454 Sequencing (SRP001810) 104 20 - Leu TAG [SRA]
>SRA1034997 SRR035089.214276 454 Sequencing (SRP001810) 104 20 - Leu TAG [SRA]
>SRA1035027 SRR035089.221431 454 Sequencing (SRP001810) 104 20 - Leu TAG [SRA]
>SRA1042108 SRR035091.339703 454 Sequencing (SRP001812) 208 124 - Leu TAG [SRA]
>SRA1048165 SRR035094.120972 454 Sequencing (SRP001815) 240 324 + Leu TAG [SRA]
Identical group No.118294 (8 seq.)
>WENV170620079 FUWD013025456 [FUWD] metagenome; unknown 6600 6686 + Leu TAG [ENA] ¢þ
>WENV170623296 FUWD013144954 [FUWD] metagenome; unknown 377 463 + Leu TAG [ENA] ¢þ
>WENV170628204 FUWD013243358 [FUWD] metagenome; unknown 6600 6686 + Leu TAG [ENA] ¢þ
>WENV170631557 FUWD013356943 [FUWD] metagenome; unknown 377 463 + Leu TAG [ENA] ¢þ
>SRA1029215 SRR035087.93266 454 Sequencing (SRP001808) 184 98 - Leu TAG [SRA]
>SRA1033426 SRR035088.253914 454 Sequencing (SRP001809) 174 260 + Leu TAG [SRA]
>SRA1033693 SRR035088.326803 454 Sequencing (SRP001809) 166 80 - Leu TAG [SRA]
>SRA1048916 SRR035094.285458 454 Sequencing (SRP001815) 389 303 - Leu TAG [SRA]
Identical group No.118378 (6 seq.)
>WENV170608032 FUWD010884889 [FUWD] metagenome; unknown 1 87 + Leu TAG [ENA] ¢þ
>WENV170699774 LGVF01656528 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 608 524 - Leu TAG [ENA] ¢þ
>SRA1031920 SRR035087.512886 454 Sequencing (SRP001808) 251 167 - Leu TAG [SRA]
>SRA1040942 SRR035091.171303 454 Sequencing (SRP001812) 443 357 - Leu TAG [SRA]
>SRA1041085 SRR035091.194519 454 Sequencing (SRP001812) 120 206 + Leu TAG [SRA]
>SRA1048868 SRR035094.267432 454 Sequencing (SRP001815) 295 381 + Leu TAG [SRA]
Identical group No.131831 (6 seq.)
>WENV170624850 FUWD013187968 [FUWD] metagenome; unknown 1742 1828 + Leu TAG [ENA] ¢þ
>WENV170633118 FUWD013391785 [FUWD] metagenome; unknown 1742 1828 + Leu TAG [ENA] ¢þ
>SRA1048445 SRR035094.174652 454 Sequencing (SRP001815) 125 211 + Leu TAG [SRA]
>SRA1049026 SRR035094.318296 454 Sequencing (SRP001815) 29 115 + Leu TAG [SRA]
>SRA1049226 SRR035095.40571 454 Sequencing (SRP001816) 401 315 - Leu TAG [SRA]
>SRA1049515 SRR035095.88765 454 Sequencing (SRP001816) 401 315 - Leu TAG [SRA]
Identical group No.131847 (13 seq.)
>WENV170627201 FUWD013231996 [FUWD] metagenome; unknown 1789 1704 - Leu TAG [ENA] ¢þ
>WENV170632588 FUWD013384757 [FUWD] metagenome; unknown 1789 1704 - Leu TAG [ENA] ¢þ
>SRA1021330 SRR035083.243374 454 Sequencing (SRP001804) 232 317 + Leu TAG [SRA]
>SRA1032525 SRR035088.38294 454 Sequencing (SRP001809) 29 114 + Leu TAG [SRA]
>SRA1042745 SRR035091.439336 454 Sequencing (SRP001812) 106 191 + Leu TAG [SRA]
>SRA1042801 SRR035091.449133 454 Sequencing (SRP001812) 49 134 + Leu TAG [SRA]
>SRA1042911 SRR035091.466299 454 Sequencing (SRP001812) 69 154 + Leu TAG [SRA]
>SRA1043905 SRR035092.192247 454 Sequencing (SRP001813) 40 125 + Leu TAG [SRA]
>SRA1044807 SRR035092.348371 454 Sequencing (SRP001813) 327 242 - Leu TAG [SRA]
>SRA1047830 SRR035094.49965 454 Sequencing (SRP001815) 169 254 + Leu TAG [SRA]
>SRA1049553 SRR035095.95045 454 Sequencing (SRP001816) 489 404 - Leu TAG [SRA]
>SRA1049617 SRR035095.105209 454 Sequencing (SRP001816) 135 50 - Leu TAG [SRA]
>SRA1050424 SRR035095.259770 454 Sequencing (SRP001816) 313 228 - Leu TAG [SRA]
Identical group No.145026 (1 seq.)
>SRA1047995 SRR035094.84760 454 Sequencing (SRP001815) 130 47 - Leu TAG [SRA]
Identical group No.145033 (1 seq.)
>SRA1048370 SRR035094.158936 454 Sequencing (SRP001815) 267 181 - Leu TAG [SRA]
Identical group No.153852 (2 seq.)
>SRA1025960 SRR035085.117372 454 Sequencing (SRP001806) 396 311 - Leu TAG [SRA]
>SRA1048474 SRR035094.181841 454 Sequencing (SRP001815) 131 46 - Leu TAG [SRA]
Identical group No.174303 (1 seq.)
>SRA1048309 SRR035094.145142 454 Sequencing (SRP001815) 83 168 + Leu TAG [SRA]
Identical group No.174306 (1 seq.)
>SRA1048369 SRR035094.158852 454 Sequencing (SRP001815) 164 79 - Leu TAG [SRA]
Identical group No.174309 (1 seq.)
>SRA1048588 SRR035094.204081 454 Sequencing (SRP001815) 169 254 + Leu TAG [SRA]
Identical group No.180189 (3 seq.)
>WENV170612028 FUWD012485430 [FUWD] metagenome; unknown 88 172 + Leu TAG [ENA] ¢þ
>SRA1025544 SRR035085.36311 454 Sequencing (SRP001806) 299 382 + Leu TAG [SRA]
>SRA1047823 SRR035094.48562 454 Sequencing (SRP001815) 165 249 + Leu TAG [SRA]
Identical group No.185347 (2 seq.)
>WENV170645307 JMSV01000044 [JMSV] bioreactor metagenome; Culture-2 Bioreactor Bmz derived from microbial biomass from the upper 2 cm of a marine 6995 6911 - Leu TAG [ENA] ¢þ
>SRA1048028 SRR035094.94349 454 Sequencing (SRP001815) 219 303 + Leu TAG [SRA]
Identical group No.186101 (5 seq.)
>WENV170603268 FUWD010297727 [FUWD] metagenome; unknown 803 719 - Leu TAG [ENA] ¢þ
>SRA1017427 SRR035082.137609 454 Sequencing (SRP001803) 275 359 + Leu TAG [SRA]
>SRA1018182 SRR035082.252336 454 Sequencing (SRP001803) 335 251 - Leu TAG [SRA]
>SRA1031002 SRR035087.358736 454 Sequencing (SRP001808) 295 379 + Leu TAG [SRA]
>SRA1048688 SRR035094.228158 454 Sequencing (SRP001815) 399 315 - Leu TAG [SRA]
Identical group No.198067 (3 seq.)
>WENV170605133 FUWD010453213 [FUWD] metagenome; unknown 209 293 + Leu TAG [ENA] ¢þ
>SRA1048679 SRR035094.225298 454 Sequencing (SRP001815) 168 252 + Leu TAG [SRA]
>SRA1049083 SRR035095.16855 454 Sequencing (SRP001816) 98 14 - Leu TAG [SRA]
Identical group No.198196 (9 seq.)
>WENV180582842 OCMR01096764 [OCMR] metagenome; diffuse fluid 6 90 + Leu TAG [ENA] ¢þ
>WENV183704379 PDWI01000197 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 14199 14281 + Leu TAG [ENA] ¢þ
>WENV183714520 PDWI01188619 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 279 361 + Leu TAG [ENA] ¢þ
>WENV183718936 PDWJ01007915 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 7944 7862 - Leu TAG [ENA] ¢þ
>WENV183720265 PDWJ01030528 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 2412 2330 - Leu TAG [ENA] ¢þ
>WENV183721806 PDWJ01088332 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 1363 1445 + Leu TAG [ENA] ¢þ
>WENV170612753 FUWD012680053 [FUWD] metagenome; unknown 351 269 - Leu TAG [ENA] ¢þ
>SRA1048261 SRR035094.136495 454 Sequencing (SRP001815) 280 362 + Leu TAG [SRA]
>WENV078033 AAFY01010623 Fossil microbial community from Whale Fall (Santa Cruz Basin) 377 461 + Leu TAG [ENA]
Identical group No.198256 (3 seq.)
>WENV170620579 FUWD013034495 [FUWD] metagenome; unknown 2922 2841 - Leu TAG [ENA] ¢þ
>WENV170628720 FUWD013251881 [FUWD] metagenome; unknown 2922 2841 - Leu TAG [ENA] ¢þ
>SRA1047786 SRR035094.41487 454 Sequencing (SRP001815) 153 234 + Leu TAG [SRA]
Identical group No.198268 (5 seq.)
>WENV170621632 FUWD013066713 [FUWD] metagenome; unknown 3080 3164 + Leu TAG [ENA] ¢þ
>WENV170629821 FUWD013282672 [FUWD] metagenome; unknown 3080 3164 + Leu TAG [ENA] ¢þ
>SRA1043563 SRR035092.138505 454 Sequencing (SRP001813) 355 271 - Leu TAG [SRA]
>SRA1043809 SRR035092.179091 454 Sequencing (SRP001813) 378 462 + Leu TAG [SRA]
>SRA1048383 SRR035094.161915 454 Sequencing (SRP001815) 324 240 - Leu TAG [SRA]
Identical group No.198290 (4 seq.)
>WENV170623120 FUWD013137084 [FUWD] metagenome; unknown 580 662 + Leu TAG [ENA] ¢þ
>WENV170631359 FUWD013349898 [FUWD] metagenome; unknown 580 662 + Leu TAG [ENA] ¢þ
>SRA1048591 SRR035094.204753 454 Sequencing (SRP001815) 179 261 + Leu TAG [SRA]
>SRA1050086 SRR035095.189467 454 Sequencing (SRP001816) 13 95 + Leu TAG [SRA]
Identical group No.198293 (4 seq.)
>WENV170623342 FUWD013146550 [FUWD] metagenome; unknown 956 1038 + Leu TAG [ENA] ¢þ
>WENV170631570 FUWD013357418 [FUWD] metagenome; unknown 5529 5447 - Leu TAG [ENA] ¢þ
>SRA1048401 SRR035094.165731 454 Sequencing (SRP001815) 145 227 + Leu TAG [SRA]
>SRA1049680 SRR035095.118005 454 Sequencing (SRP001816) 327 245 - Leu TAG [SRA]
Identical group No.210168 (1 seq.)
>SRA1047969 SRR035094.77848 454 Sequencing (SRP001815) 256 337 + Leu TAG [SRA]
Identical group No.210170 (1 seq.)
>SRA1048050 SRR035094.98805 454 Sequencing (SRP001815) 331 413 + Leu TAG [SRA]
Identical group No.210174 (1 seq.)
>SRA1048540 SRR035094.196555 454 Sequencing (SRP001815) 177 261 + Leu TAG [SRA]
Identical group No.210177 (1 seq.)
>SRA1048612 SRR035094.209595 454 Sequencing (SRP001815) 361 280 - Leu TAG [SRA]
Identical group No.210178 (2 seq.)
>SRA1048629 SRR035094.211957 454 Sequencing (SRP001815) 178 94 - Leu TAG [SRA]
>W1710606609 FWXY01000002 Thermodesulfobacteriota Desulfocicer vacuolatum DSM 3385 [FWXY] 238846 238762 - Leu TAG [ENA] ¡û
Identical group No.226328 (1 seq.)
>SRA1047655 SRR035094.12642 454 Sequencing (SRP001815) 207 124 - Leu TAG [SRA]
Identical group No.415521 (1 seq.)
>SRA1047779 SRR035094.40112 454 Sequencing (SRP001815) 224 148 - Leu TAG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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