tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001815)

Anticodon = TGA

HIT: 20 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.21416 (6 seq.)
>WENV170607899 FUWD010869408 [FUWD] metagenome; unknown 374 465 + Ser TGA [ENA] ¢þ
>SRA1029297 SRR035087.104545 454 Sequencing (SRP001808) 11 102 + Ser TGA [SRA]
>SRA1029386 SRR035087.119820 454 Sequencing (SRP001808) 295 204 - Ser TGA [SRA]
>SRA1044477 SRR035092.286144 454 Sequencing (SRP001813) 308 399 + Ser TGA [SRA]
>SRA1048160 SRR035094.120113 454 Sequencing (SRP001815) 122 212 + Ser TGA [SRA]
>SRA1048831 SRR035094.259234 454 Sequencing (SRP001815) 130 39 - Ser TGA [SRA]
Identical group No.28080 (1 seq.)
>SRA1048873 SRR035094.269673 454 Sequencing (SRP001815) 197 288 + Ser TGA [SRA]
Identical group No.45857 (3 seq.)
>SRA1026835 SRR035085.306660 454 Sequencing (SRP001806) 145 57 - Ser TGA [SRA]
>SRA1048227 SRR035094.130419 454 Sequencing (SRP001815) 183 95 - Ser TGA [SRA]
>SRA1048628 SRR035094.211885 454 Sequencing (SRP001815) 183 95 - Ser TGA [SRA]
Identical group No.55339 (3 seq.)
>WENV170974196 MTKY01055395 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 9077 9166 + Ser TGA [ENA] ¢þ
>SRA1047933 SRR035094.70097 454 Sequencing (SRP001815) 98 187 + Ser TGA [SRA]
>SRA1048118 SRR035094.112961 454 Sequencing (SRP001815) 98 187 + Ser TGA [SRA]
Identical group No.57934 (5 seq.)
>WENV170607993 FUWD010880023 [FUWD] metagenome; unknown 155 242 + Ser TGA [ENA] ¢þ
>WENV170623334 FUWD013145916 [FUWD] metagenome; unknown 711 798 + Ser TGA [ENA] ¢þ
>WENV170631597 FUWD013357861 [FUWD] metagenome; unknown 711 798 + Ser TGA [ENA] ¢þ
>SRA1033301 SRR035088.219611 454 Sequencing (SRP001809) 77 166 + Ser TGA [SRA]
>SRA1048455 SRR035094.176815 454 Sequencing (SRP001815) 165 252 + Ser TGA [SRA]
Identical group No.57937 (3 seq.)
>WENV170608205 FUWD010902190 [FUWD] metagenome; unknown 89 2 - Ser TGA [ENA] ¢þ
>SRA1047903 SRR035094.64800 454 Sequencing (SRP001815) 100 11 - Ser TGA [SRA]
>SRA1049720 SRR035095.125539 454 Sequencing (SRP001816) 196 283 + Ser TGA [SRA]
Identical group No.66801 (1 seq.)
>SRA1047682 SRR035094.19124 454 Sequencing (SRP001815) 163 249 + Ser TGA [SRA]
Identical group No.66803 (1 seq.)
>SRA1047816 SRR035094.46417 454 Sequencing (SRP001815) 231 320 + Ser TGA [SRA]
Identical group No.66804 (1 seq.)
>SRA1047883 SRR035094.60945 454 Sequencing (SRP001815) 437 350 - Ser TGA [SRA]
Identical group No.66810 (1 seq.)
>SRA1048294 SRR035094.141122 454 Sequencing (SRP001815) 160 71 - Ser TGA [SRA]
Identical group No.66816 (1 seq.)
>SRA1048864 SRR035094.266289 454 Sequencing (SRP001815) 250 162 - Ser TGA [SRA]
Identical group No.66819 (1 seq.)
>SRA1048639 SRR035094.214244 454 Sequencing (SRP001815) 120 30 - Ser TGA [SRA]
Identical group No.83989 (1 seq.)
>SRA1047737 SRR035094.32071 454 Sequencing (SRP001815) 81 168 + Ser TGA [SRA]
Identical group No.87042 (8 seq.)
>W131193753 ASOZ01000011 Atribacterota Atribacteria bacterium JGI 0000014-F07 OP9 bacterium JGI 0000014-F07 [ASOZ] 4373 4286 - Ser TGA [ENA] ¡û
>WENV170602334 FUWD010227344 [FUWD] metagenome; unknown 662 749 + Ser TGA [ENA] ¢þ
>SRA1026641 SRR035085.246914 454 Sequencing (SRP001806) 177 90 - Ser TGA [SRA]
>SRA1029421 SRR035087.124831 454 Sequencing (SRP001808) 99 12 - Ser TGA [SRA]
>SRA1048242 SRR035094.133372 454 Sequencing (SRP001815) 91 178 + Ser TGA [SRA]
>SRA1048422 SRR035094.169752 454 Sequencing (SRP001815) 91 178 + Ser TGA [SRA]
>W1510076774 CDPL01000020 Atribacterota Atribacteria bacterium JGI 0000014-F07 [CDPL] 5546 5633 + Ser TGA [ENA] ¡û
>W1510076786 CDPL01000121 Atribacterota Atribacteria bacterium JGI 0000014-F07 [CDPL] 1769 1682 - Ser TGA [ENA] ¡û
Identical group No.87094 (14 seq.)
>C171072569 CP018091 Cyanobacteriota Synechococcus sp. SynAce01 [CP018091] 695337 695423 + Ser TGA - ¡û
>WENV170614935 FUWD012844721 [FUWD] metagenome; unknown 5246 5332 + Ser TGA [ENA] ¢þ
>SRA1028253 SRR035086.285748 454 Sequencing (SRP001807) 28 114 + Ser TGA [SRA]
>SRA1028730 SRR035086.412244 454 Sequencing (SRP001807) 135 49 - Ser TGA [SRA]
>SRA1032279 SRR035087.594065 454 Sequencing (SRP001808) 96 10 - Ser TGA [SRA]
>SRA1032544 SRR035088.42863 454 Sequencing (SRP001809) 120 34 - Ser TGA [SRA]
>SRA1036195 SRR035089.467204 454 Sequencing (SRP001810) 228 142 - Ser TGA [SRA]
>SRA1048210 SRR035094.129218 454 Sequencing (SRP001815) 175 89 - Ser TGA [SRA]
>SRA1048256 SRR035094.135541 454 Sequencing (SRP001815) 53 139 + Ser TGA [SRA]
>SRA1051800 SRR035098.78842 454 Sequencing (SRP001819) 115 29 - Ser TGA [SRA]
>SRA1052111 SRR035098.143326 454 Sequencing (SRP001819) 333 247 - Ser TGA [SRA]
>SRA1052894 SRR035098.295545 454 Sequencing (SRP001819) 218 132 - Ser TGA [SRA]
>SRA1053224 SRR035098.364226 454 Sequencing (SRP001819) 100 14 - Ser TGA [SRA]
>SRA1053700 SRR035098.470009 454 Sequencing (SRP001819) 50 136 + Ser TGA [SRA]
Identical group No.107010 (1 seq.)
>SRA1048117 SRR035094.112755 454 Sequencing (SRP001815) 330 242 - Ser TGA [SRA]
Identical group No.107015 (1 seq.)
>SRA1048388 SRR035094.162376 454 Sequencing (SRP001815) 441 527 + Ser TGA [SRA]
Identical group No.153915 (15 seq.)
>WENV183512218 OMKS01000147 [OMKS] sediment metagenome; hot spring sediment 41868 41953 + Ser TGA [ENA] ¢þ
>WENV183513112 OMKS01002776 [OMKS] sediment metagenome; hot spring sediment 4514 4429 - Ser TGA [ENA] ¢þ
>WENV170619645 FUWD013018439 [FUWD] metagenome; unknown 1375 1460 + Ser TGA [ENA] ¢þ
>WENV170619689 FUWD013019112 [FUWD] metagenome; unknown 161 246 + Ser TGA [ENA] ¢þ
>WENV170624190 FUWD013177246 [FUWD] metagenome; unknown 280 195 - Ser TGA [ENA] ¢þ
>WENV170627752 FUWD013236893 [FUWD] metagenome; unknown 1375 1460 + Ser TGA [ENA] ¢þ
>WENV170632473 FUWD013383052 [FUWD] metagenome; unknown 280 195 - Ser TGA [ENA] ¢þ
>SRA1031632 SRR035087.462537 454 Sequencing (SRP001808) 6 91 + Ser TGA [SRA]
>SRA1032138 SRR035087.560450 454 Sequencing (SRP001808) 366 281 - Ser TGA [SRA]
>SRA1036265 SRR035089.483055 454 Sequencing (SRP001810) 352 267 - Ser TGA [SRA]
>SRA1036755 SRR035089.607301 454 Sequencing (SRP001810) 18 103 + Ser TGA [SRA]
>SRA1047809 SRR035094.45770 454 Sequencing (SRP001815) 250 165 - Ser TGA [SRA]
>SRA1048686 SRR035094.227746 454 Sequencing (SRP001815) 201 286 + Ser TGA [SRA]
>SRA1050060 SRR035095.185315 454 Sequencing (SRP001816) 433 348 - Ser TGA [SRA]
>SRA1050345 SRR035095.241610 454 Sequencing (SRP001816) 130 215 + Ser TGA [SRA]
Identical group No.165815 (10 seq.)
>WENV170624310 FUWD013179602 [FUWD] metagenome; unknown 2549 2634 + Ser TGA [ENA] ¢þ
>WENV170632597 FUWD013384921 [FUWD] metagenome; unknown 2549 2634 + Ser TGA [ENA] ¢þ
>SRA1018590 SRR035082.316718 454 Sequencing (SRP001803) 153 68 - Ser TGA [SRA]
>SRA1040960 SRR035091.175064 454 Sequencing (SRP001812) 241 326 + Ser TGA [SRA]
>SRA1041428 SRR035091.240508 454 Sequencing (SRP001812) 384 299 - Ser TGA [SRA]
>SRA1042176 SRR035091.350118 454 Sequencing (SRP001812) 96 11 - Ser TGA [SRA]
>SRA1042296 SRR035091.369113 454 Sequencing (SRP001812) 123 38 - Ser TGA [SRA]
>SRA1043320 SRR035092.95911 454 Sequencing (SRP001813) 280 195 - Ser TGA [SRA]
>SRA1048497 SRR035094.187192 454 Sequencing (SRP001815) 281 196 - Ser TGA [SRA]
>SRA1048528 SRR035094.193742 454 Sequencing (SRP001815) 105 20 - Ser TGA [SRA]
Identical group No.174302 (1 seq.)
>SRA1048253 SRR035094.135351 454 Sequencing (SRP001815) 64 149 + Ser TGA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK