tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001815)

Anticodon = TTC

HIT: 26 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.235094 (2 seq.)
>SRA1036028 SRR035089.429682 454 Sequencing (SRP001810) 208 286 + Glu TTC [SRA]
>SRA1048378 SRR035094.161246 454 Sequencing (SRP001815) 386 308 - Glu TTC [SRA]
Identical group No.254070 (2 seq.)
>WENV170608004 FUWD010882029 [FUWD] metagenome; unknown 313 238 - Glu TTC [ENA] ¢þ
>SRA1048662 SRR035094.219381 454 Sequencing (SRP001815) 90 165 + Glu TTC [SRA]
Identical group No.263993 (1 seq.)
>SRA1047959 SRR035094.75974 454 Sequencing (SRP001815) 501 423 - Glu TTC [SRA]
Identical group No.263995 (1 seq.)
>SRA1048029 SRR035094.95349 454 Sequencing (SRP001815) 345 268 - Glu TTC [SRA]
Identical group No.263999 (1 seq.)
>SRA1048102 SRR035094.108938 454 Sequencing (SRP001815) 124 47 - Glu TTC [SRA]
Identical group No.264010 (1 seq.)
>SRA1048544 SRR035094.196974 454 Sequencing (SRP001815) 319 398 + Glu TTC [SRA]
Identical group No.415510 (1 seq.)
>SRA1047660 SRR035094.13694 454 Sequencing (SRP001815) 215 139 - Glu TTC [SRA]
Identical group No.415529 (1 seq.)
>SRA1047880 SRR035094.60335 454 Sequencing (SRP001815) 429 353 - Glu TTC [SRA]
Identical group No.453281 (13 seq.)
>WENV170615976 FUWD012873352 [FUWD] metagenome; unknown 91 16 - Glu TTC [ENA] ¢þ
>WENV170624180 FUWD013177114 [FUWD] metagenome; unknown 2379 2304 - Glu TTC [ENA] ¢þ
>WENV170632464 FUWD013382943 [FUWD] metagenome; unknown 2379 2304 - Glu TTC [ENA] ¢þ
>SRA1025772 SRR035085.80386 454 Sequencing (SRP001806) 149 224 + Glu TTC [SRA]
>SRA1026349 SRR035085.190911 454 Sequencing (SRP001806) 234 309 + Glu TTC [SRA]
>SRA1029137 SRR035087.79394 454 Sequencing (SRP001808) 390 315 - Glu TTC [SRA]
>SRA1029167 SRR035087.86178 454 Sequencing (SRP001808) 82 7 - Glu TTC [SRA]
>SRA1031889 SRR035087.506055 454 Sequencing (SRP001808) 91 16 - Glu TTC [SRA]
>SRA1035520 SRR035089.323038 454 Sequencing (SRP001810) 58 133 + Glu TTC [SRA]
>SRA1047886 SRR035094.61648 454 Sequencing (SRP001815) 112 187 + Glu TTC [SRA]
>SRA1048040 SRR035094.96881 454 Sequencing (SRP001815) 112 187 + Glu TTC [SRA]
>SRA1048280 SRR035094.138893 454 Sequencing (SRP001815) 33 108 + Glu TTC [SRA]
>SRA1048349 SRR035094.153267 454 Sequencing (SRP001815) 125 200 + Glu TTC [SRA]
Identical group No.453744 (6 seq.)
>WENV170624073 FUWD013174705 [FUWD] metagenome; unknown 1042 1117 + Glu TTC [ENA] ¢þ
>WENV170632360 FUWD013381007 [FUWD] metagenome; unknown 1042 1117 + Glu TTC [ENA] ¢þ
>SRA1029058 SRR035087.67615 454 Sequencing (SRP001808) 100 175 + Glu TTC [SRA]
>SRA1035698 SRR035089.356564 454 Sequencing (SRP001810) 275 200 - Glu TTC [SRA]
>SRA1047722 SRR035094.29281 454 Sequencing (SRP001815) 233 308 + Glu TTC [SRA]
>SRA1049387 SRR035095.69166 454 Sequencing (SRP001816) 350 275 - Glu TTC [SRA]
Identical group No.507113 (8 seq.)
>WENV170692422 LGOV01007036 [LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge 1738 1811 + Glu TTC [ENA] ¢þ
>WENV170694144 LGVD01014700 [LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at 1302 1375 + Glu TTC [ENA] ¢þ
>WENV170694963 LGVE01027412 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 73 146 + Glu TTC [ENA] ¢þ
>WENV170695731 LGVE01162476 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 1485 1558 + Glu TTC [ENA] ¢þ
>WENV170697704 LGVF01177952 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 958 1031 + Glu TTC [ENA] ¢þ
>WENV170697795 LGVF01195862 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 4296 4369 + Glu TTC [ENA] ¢þ
>WENV170698311 LGVF01311839 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 970 1043 + Glu TTC [ENA] ¢þ
>SRA1048689 SRR035094.228228 454 Sequencing (SRP001815) 141 214 + Glu TTC [SRA]
Identical group No.548414 (3 seq.)
>WENV170612734 FUWD012673809 [FUWD] metagenome; unknown 84 156 + Glu TTC [ENA] ¢þ
>SRA1047834 SRR035094.51101 454 Sequencing (SRP001815) 93 165 + Glu TTC [SRA]
>SRA1047949 SRR035094.74124 454 Sequencing (SRP001815) 96 168 + Glu TTC [SRA]
Identical group No.612511 (2 seq.)
>SRA1047650 SRR035094.7970 454 Sequencing (SRP001815) 310 238 - Glu TTC [SRA]
>SRA1047708 SRR035094.25635 454 Sequencing (SRP001815) 311 239 - Glu TTC [SRA]
Identical group No.612512 (2 seq.)
>SRA1047671 SRR035094.17099 454 Sequencing (SRP001815) 289 214 - Glu TTC [SRA]
>SRA1047690 SRR035094.21371 454 Sequencing (SRP001815) 290 215 - Glu TTC [SRA]
Identical group No.612513 (2 seq.)
>SRA1047686 SRR035094.21017 454 Sequencing (SRP001815) 128 202 + Glu TTC [SRA]
>SRA1047780 SRR035094.40363 454 Sequencing (SRP001815) 132 206 + Glu TTC [SRA]
Identical group No.612515 (1 seq.)
>SRA1047706 SRR035094.25493 454 Sequencing (SRP001815) 229 304 + Glu TTC [SRA]
Identical group No.654620 (2 seq.)
>SRA1036375 SRR035089.505579 454 Sequencing (SRP001810) 167 241 + Glu TTC [SRA]
>SRA1048146 SRR035094.116414 454 Sequencing (SRP001815) 147 221 + Glu TTC [SRA]
Identical group No.657518 (73 seq.)
>W1711392343 MENL01000202 Bacteroidota Bacteroidetes bacterium GWB2_41_8 [MENL] 5983 5909 - Glu TTC [ENA] ¡û
>W1712070429 NGNR01000003 Bacteroidota Robiginitalea sediminis O458 [NGNR] 255675 255749 + Glu TTC [ENA] ¡û
>W1712070430 NGNR01000003 Bacteroidota Robiginitalea sediminis O458 [NGNR] 255794 255868 + Glu TTC [ENA] ¡û
>WENV180098455 MTBK01246220 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 364 436 + Glu TTC [ENA] ¢þ
>WENV180296532 OBJA01000760 [OBJA] soil metagenome; sediment, water from around vicinity 18504 18432 - Glu TTC [ENA] ¢þ
>WENV180297059 OBJA01008703 [OBJA] soil metagenome; sediment, water from around vicinity 2908 2980 + Glu TTC [ENA] ¢þ
>WENV180362108 OBNW01039756 [OBNW] marine metagenome; ENVO:00002010, 'SEA WATER 81 153 + Glu TTC [ENA] ¢þ
>WENV180366194 OBOC01179597 [OBOC] marine metagenome; ocean water 181 109 - Glu TTC [ENA] ¢þ
>WENV180376362 OBOM01002856 [OBOM] marine metagenome; Seawater 546 474 - Glu TTC [ENA] ¢þ
>WENV180390176 OBPK01044820 [OBPK] marine metagenome; Sterile flask 81 9 - Glu TTC [ENA] ¢þ
>WENV180394710 OBPS01045050 [OBPS] marine metagenome; ENVO:00002010 seawater 413 341 - Glu TTC [ENA] ¢þ
>WENV180595685 OCPF01005906 [OCPF] marine metagenome; ENVO.00002150 30 102 + Glu TTC [ENA] ¢þ
>WENV180634784 OCRB01107636 [OCRB] metagenome; diffuse fluid 178 250 + Glu TTC [ENA] ¢þ
>WENV181120835 OEFK01076894 [OEFK] marine metagenome; ENVO:00002010 seawater 319 391 + Glu TTC [ENA] ¢þ
>WENV181325273 OFLI01027134 [OFLI] seawater metagenome; seawater 385 457 + Glu TTC [ENA] ¢þ
>WENV181391212 OFRQ01068794 [OFRQ] seawater metagenome; seawater 377 305 - Glu TTC [ENA] ¢þ
>WENV181392641 OFRX01000817 [OFRX] seawater metagenome; seawater 2487 2559 + Glu TTC [ENA] ¢þ
>WENV182565685 OJEH01026210 [OJEH] seawater metagenome; Sea water 556 628 + Glu TTC [ENA] ¢þ
>WENV182580279 OJGU01033863 [OJGU] seawater metagenome; Sea water 534 462 - Glu TTC [ENA] ¢þ
>WENV182585068 OJHH01000714 [OJHH] seawater metagenome; Sea water 4064 3992 - Glu TTC [ENA] ¢þ
>WENV182594469 OJIV01015635 [OJIV] seawater metagenome; Sea water 511 439 - Glu TTC [ENA] ¢þ
>WENV183513895 OMKS01008951 [OMKS] sediment metagenome; hot spring sediment 5698 5626 - Glu TTC [ENA] ¢þ
>WENV183617329 OOEE01179363 [OOEE] marine metagenome; sea ice 164 92 - Glu TTC [ENA] ¢þ
>WENV183618727 OOFO01027572 [OOFO] marine metagenome; seawater 385 457 + Glu TTC [ENA] ¢þ
>WENV183626475 OOGI01012363 [OOGI] marine metagenome; seawater 523 451 - Glu TTC [ENA] ¢þ
>WENV183628996 OOGP01000752 [OOGP] marine metagenome; seawater 2487 2559 + Glu TTC [ENA] ¢þ
>WENV183629811 OOGQ01011616 [OOGQ] marine metagenome; seawater 403 331 - Glu TTC [ENA] ¢þ
>WENV183677806 ORJL011800813 [ORJL] groundwater metagenome; groundwater 414 342 - Glu TTC [ENA] ¢þ
>WENV183713672 PDWI01148096 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1336 1408 + Glu TTC [ENA] ¢þ
>WENV183748004 PPFU01006682 [PPFU] hypolithon metagenome; Antarctic Hypolithon 5335 5407 + Glu TTC [ENA] ¢þ
>WENV170262700 CERB01309718 [CERB] marine metagenome genome assembly TARA_072_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 559 485 - Glu TTC [ENA] ¢þ
>WENV170274424 CERM01016747 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4097 4171 + Glu TTC [ENA] ¢þ
>WENV170296747 CESE01047308 [CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 21041 20969 - Glu TTC [ENA] ¢þ
>WENV170307351 CESJ01140672 [CESJ] marine metagenome genome assembly TARA_084_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1323 1249 - Glu TTC [ENA] ¢þ
>WENV170312460 CESM01261926 [CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 412 484 + Glu TTC [ENA] ¢þ
>WENV170326060 CEST01086470 [CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3926 3998 + Glu TTC [ENA] ¢þ
>WENV170327858 CESU01107437 [CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2854 2780 - Glu TTC [ENA] ¢þ
>WENV170440533 CEUV01107671 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 77 3 - Glu TTC [ENA] ¢þ
>WENV170538040 CEWR01047415 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 11749 11821 + Glu TTC [ENA] ¢þ
>WENV170567997 FLMP01012519 [FLMP] seawater metagenome; seawater 377 303 - Glu TTC [ENA] ¢þ
>WENV170642952 JFJP01047312 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 1046 974 - Glu TTC [ENA] ¢þ
>WENV170643079 JFJP01049532 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 5125 5199 + Glu TTC [ENA] ¢þ
>WENV170663209 JYMV01003095 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 464 390 - Glu TTC [ENA] ¢þ
>WENV170663323 JYMV01004253 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 22072 22146 + Glu TTC [ENA] ¢þ
>WENV170665946 JYMV01031741 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 313 239 - Glu TTC [ENA] ¢þ
>WENV170674675 LCWY01000054 [LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate 16898 16972 + Glu TTC [ENA] ¢þ
>WENV170674680 LCWY01000082 [LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate 1 75 + Glu TTC [ENA] ¢þ
>WENV170674964 LCWZ01000076 [LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate 11805 11879 + Glu TTC [ENA] ¢þ
>WENV170674965 LCWZ01000076 [LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate 12236 12310 + Glu TTC [ENA] ¢þ
>WENV170675021 LCWZ01000920 [LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate 3225 3151 - Glu TTC [ENA] ¢þ
>WENV170820002 MDSX01103758 [MDSX] marine metagenome; seawater 1604 1530 - Glu TTC [ENA] ¢þ
>WENV170821062 MDSY01015616 [MDSY] marine metagenome; seawater 3821 3895 + Glu TTC [ENA] ¢þ
>WENV170822522 MDSY01041694 [MDSY] marine metagenome; seawater 78 6 - Glu TTC [ENA] ¢þ
>WENV170898470 MDTD01126550 [MDTD] marine metagenome; seawater 99 27 - Glu TTC [ENA] ¢þ
>WENV170919749 MDTF01011973 [MDTF] marine metagenome; seawater 10511 10437 - Glu TTC [ENA] ¢þ
>WENV170920049 MDTF01014529 [MDTF] marine metagenome; seawater 1662 1734 + Glu TTC [ENA] ¢þ
>WENV170926659 MDTG01104003 [MDTG] marine metagenome; seawater 2416 2490 + Glu TTC [ENA] ¢þ
>WENV170935679 MDTG01261447 [MDTG] marine metagenome; seawater 399 325 - Glu TTC [ENA] ¢þ
>WENV170953593 MEHZ011654388 [MEHZ] marine metagenome; marine surface water 1194 1268 + Glu TTC [ENA] ¢þ
>WENV170968686 MTKW01013082 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 4882 4954 + Glu TTC [ENA] ¢þ
>C191062421 CP028923 Bacteroidota Mangrovivirga cuniculi R1DC9 [CP028923] 3270606 3270534 - Glu TTC - ¡û
>C191062422 CP028923 Bacteroidota Mangrovivirga cuniculi R1DC9 [CP028923] 3270347 3270275 - Glu TTC - ¡û
>W1911748603 QWET01000016 Bacteroidota Mariniphaga sediminis SY21 [QWET] 109932 110004 + Glu TTC [ENA] ¡û
>C151024002 CP007451 Bacteroidota Draconibacterium orientale FH5 [CP007451] 1212046 1212120 + Glu TTC [Ensembl] ¡û
>SRA1033060 SRR035088.162440 454 Sequencing (SRP001809) 344 418 + Glu TTC [SRA]
>SRA1048305 SRR035094.144466 454 Sequencing (SRP001815) 430 356 - Glu TTC [SRA]
>W1511346374 JRHC01000004 Bacteroidota Draconibacterium sediminis JN14CK-3 [JRHC] 417092 417018 - Glu TTC [ENA] ¡û
>W1511576880 LAQC01000010 Bacteroidota Cryomorphaceae bacterium ASP10-05a [LAQC] 29576 29504 - Glu TTC [ENA] ¡û
>W1511698621 LGIA01000043 Bacteroidota Sunxiuqinia dokdonensis SK [LGIA] 21684 21612 - Glu TTC [ENA] ¡û
>W1710553613 FOHT01000021 Bacteroidota Draconibacterium orientale [FOHT] 12047 11973 - Glu TTC [ENA] ¡û
>W1710561067 FONW01000001 Bacteroidota Sunxiuqinia elliptica [FONW] 747643 747715 + Glu TTC [ENA] ¡û
>W1710583076 FQUM01000005 Bacteroidota Mariniphaga anaerophila [FQUM] 33828 33756 - Glu TTC [ENA] ¡û
>W1710588239 FQZE01000011 Bacteroidota Tangfeifania diversioriginum [FQZE] 51850 51922 + Glu TTC [ENA] ¡û
Identical group No.672294 (3 seq.)
>WENV170612740 FUWD012675399 [FUWD] metagenome; unknown 27 101 + Glu TTC [ENA] ¢þ
>SRA1029186 SRR035087.88908 454 Sequencing (SRP001808) 210 136 - Glu TTC [SRA]
>SRA1048277 SRR035094.138346 454 Sequencing (SRP001815) 37 111 + Glu TTC [SRA]
Identical group No.672374 (4 seq.)
>WENV170608213 FUWD010902979 [FUWD] metagenome; unknown 77 5 - Glu TTC [ENA] ¢þ
>SRA1016901 SRR035082.49717 454 Sequencing (SRP001803) 184 258 + Glu TTC [SRA]
>SRA1029873 SRR035087.195332 454 Sequencing (SRP001808) 96 24 - Glu TTC [SRA]
>SRA1048408 SRR035094.166708 454 Sequencing (SRP001815) 256 182 - Glu TTC [SRA]
Identical group No.693320 (7 seq.)
>WENV183800300 PVBE010578247 [PVBE] marine metagenome; water 3283 3357 + Glu TTC [ENA] ¢þ
>WENV170603352 FUWD010304675 [FUWD] metagenome; unknown 79 5 - Glu TTC [ENA] ¢þ
>WENV170619366 FUWD013011506 [FUWD] metagenome; unknown 523 449 - Glu TTC [ENA] ¢þ
>WENV170619368 FUWD013011507 [FUWD] metagenome; unknown 76 2 - Glu TTC [ENA] ¢þ
>SRA1032956 SRR035088.140359 454 Sequencing (SRP001809) 525 451 - Glu TTC [SRA]
>SRA1037672 SRR035090.172383 454 Sequencing (SRP001811) 233 307 + Glu TTC [SRA]
>SRA1048444 SRR035094.174644 454 Sequencing (SRP001815) 93 19 - Glu TTC [SRA]
Identical group No.710481 (2 seq.)
>WENV170600024 FUWD010103175 [FUWD] metagenome; unknown 103 177 + Glu TTC [ENA] ¢þ
>SRA1048618 SRR035094.211060 454 Sequencing (SRP001815) 113 187 + Glu TTC [SRA]
Identical group No.711204 (2 seq.)
>WENV170613435 FUWD012804047 [FUWD] metagenome; unknown 480 406 - Glu TTC [ENA] ¢þ
>SRA1048961 SRR035094.297579 454 Sequencing (SRP001815) 291 217 - Glu TTC [SRA]
Identical group No.751714 (1 seq.)
>SRA1048523 SRR035094.193070 454 Sequencing (SRP001815) 430 356 - Glu TTC [SRA]
Identical group No.751724 (1 seq.)
>SRA1048753 SRR035094.241624 454 Sequencing (SRP001815) 266 192 - Glu TTC [SRA]
Identical group No.751729 (1 seq.)
>SRA1048830 SRR035094.259151 454 Sequencing (SRP001815) 192 265 + Glu TTC [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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