tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001815)

Anticodon = TTG

HIT: 20 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.415575 (1 seq.)
>SRA1048655 SRR035094.217436 454 Sequencing (SRP001815) 420 345 - Gln TTG [SRA]
Identical group No.415584 (1 seq.)
>SRA1048767 SRR035094.243624 454 Sequencing (SRP001815) 42 118 + Gln TTG [SRA]
Identical group No.612518 (1 seq.)
>SRA1047766 SRR035094.37140 454 Sequencing (SRP001815) 144 69 - Gln TTG [SRA]
Identical group No.612534 (1 seq.)
>SRA1048004 SRR035094.86721 454 Sequencing (SRP001815) 456 381 - Gln TTG [SRA]
Identical group No.654427 (5 seq.)
>WENV170624899 FUWD013188546 [FUWD] metagenome; unknown 880 954 + Gln TTG [ENA] ¢þ
>WENV170633161 FUWD013392285 [FUWD] metagenome; unknown 880 954 + Gln TTG [ENA] ¢þ
>SRA1034259 SRR035089.38582 454 Sequencing (SRP001810) 150 224 + Gln TTG [SRA]
>SRA1034752 SRR035089.166865 454 Sequencing (SRP001810) 151 225 + Gln TTG [SRA]
>SRA1047776 SRR035094.39470 454 Sequencing (SRP001815) 317 391 + Gln TTG [SRA]
Identical group No.672472 (3 seq.)
>SRA1030693 SRR035087.315562 454 Sequencing (SRP001808) 312 241 - Gln TTG [SRA]
>SRA1048197 SRR035094.127412 454 Sequencing (SRP001815) 403 474 + Gln TTG [SRA]
>SRA1049176 SRR035095.33002 454 Sequencing (SRP001816) 252 323 + Gln TTG [SRA]
Identical group No.672491 (7 seq.)
>WENV170624419 FUWD013181295 [FUWD] metagenome; unknown 4768 4842 + Gln TTG [ENA] ¢þ
>WENV170632705 FUWD013386283 [FUWD] metagenome; unknown 4768 4842 + Gln TTG [ENA] ¢þ
>WENV170698466 LGVF01340523 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 407 333 - Gln TTG [ENA] ¢þ
>SRA1030875 SRR035087.341948 454 Sequencing (SRP001808) 247 321 + Gln TTG [SRA]
>SRA1048223 SRR035094.130308 454 Sequencing (SRP001815) 285 211 - Gln TTG [SRA]
>SRA1048543 SRR035094.196557 454 Sequencing (SRP001815) 286 212 - Gln TTG [SRA]
>SRA1049924 SRR035095.161448 454 Sequencing (SRP001816) 154 228 + Gln TTG [SRA]
Identical group No.711121 (3 seq.)
>WENV170612748 FUWD012678207 [FUWD] metagenome; unknown 76 150 + Gln TTG [ENA] ¢þ
>SRA1048469 SRR035094.180954 454 Sequencing (SRP001815) 261 335 + Gln TTG [SRA]
>SRA1048895 SRR035094.278716 454 Sequencing (SRP001815) 86 160 + Gln TTG [SRA]
Identical group No.751689 (1 seq.)
>SRA1047921 SRR035094.68312 454 Sequencing (SRP001815) 248 174 - Gln TTG [SRA]
Identical group No.751691 (2 seq.)
>SRA1047927 SRR035094.69458 454 Sequencing (SRP001815) 195 269 + Gln TTG [SRA]
>SRA1048318 SRR035094.146096 454 Sequencing (SRP001815) 196 270 + Gln TTG [SRA]
Identical group No.751716 (1 seq.)
>SRA1048592 SRR035094.204971 454 Sequencing (SRP001815) 168 94 - Gln TTG [SRA]
Identical group No.751733 (1 seq.)
>SRA1048872 SRR035094.269184 454 Sequencing (SRP001815) 271 345 + Gln TTG [SRA]
Identical group No.779847 (5 seq.)
>WENV170608132 FUWD010895688 [FUWD] metagenome; unknown 651 578 - Gln TTG [ENA] ¢þ
>SRA1026661 SRR035085.252256 454 Sequencing (SRP001806) 94 167 + Gln TTG [SRA]
>SRA1026681 SRR035085.258877 454 Sequencing (SRP001806) 173 102 - Gln TTG [SRA]
>SRA1048379 SRR035094.161273 454 Sequencing (SRP001815) 147 220 + Gln TTG [SRA]
>SRA1050290 SRR035095.232246 454 Sequencing (SRP001816) 118 191 + Gln TTG [SRA]
Identical group No.788200 (5 seq.)
>WENV170608145 FUWD010896263 [FUWD] metagenome; unknown 362 432 + Gln TTG [ENA] ¢þ
>SRA1017866 SRR035082.208021 454 Sequencing (SRP001803) 134 204 + Gln TTG [SRA]
>SRA1031850 SRR035087.498967 454 Sequencing (SRP001808) 385 455 + Gln TTG [SRA]
>SRA1042003 SRR035091.326308 454 Sequencing (SRP001812) 25 95 + Gln TTG [SRA]
>SRA1047847 SRR035094.52912 454 Sequencing (SRP001815) 99 29 - Gln TTG [SRA]
Identical group No.799328 (5 seq.)
>W1711065944 LSCC01000065 Unclassified Marinimicrobia bacterium TCS52 [LSCC] 7262 7335 + Gln TTG [ENA] ¡û
>WENV170001059 AGBJ01001799 [AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East 625 698 + Gln TTG [ENA] ¢þ
>WENV170605157 FUWD010454931 [FUWD] metagenome; unknown 11 84 + Gln TTG [ENA] ¢þ
>SRA1047745 SRR035094.33764 454 Sequencing (SRP001815) 254 181 - Gln TTG [SRA]
>W1610906558 LSCC01000065 Unclassified Marinimicrobia bacterium TCS52 [LSCC] 7262 7335 + Gln TTG [ENA] ¡û
Identical group No.804930 (6 seq.)
>WENV170600025 FUWD010103202 [FUWD] metagenome; unknown 371 298 - Gln TTG [ENA] ¢þ
>WENV170626771 FUWD013229363 [FUWD] metagenome; unknown 4488 4415 - Gln TTG [ENA] ¢þ
>SRA1040221 SRR035091.61631 454 Sequencing (SRP001812) 211 284 + Gln TTG [SRA]
>SRA1040339 SRR035091.80956 454 Sequencing (SRP001812) 211 284 + Gln TTG [SRA]
>SRA1041990 SRR035091.323848 454 Sequencing (SRP001812) 233 160 - Gln TTG [SRA]
>SRA1048371 SRR035094.159367 454 Sequencing (SRP001815) 292 219 - Gln TTG [SRA]
Identical group No.808229 (3 seq.)
>WENV183706051 PDWI01002994 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 5197 5269 + Gln TTG [ENA] ¢þ
>WENV183711821 PDWI01081479 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1290 1363 + Gln TTG [ENA] ¢þ
>SRA1047735 SRR035094.31579 454 Sequencing (SRP001815) 119 49 - Gln TTG [SRA]
Identical group No.824082 (1 seq.)
>SRA1047944 SRR035094.72674 454 Sequencing (SRP001815) 108 181 + Gln TTG [SRA]
Identical group No.824096 (1 seq.)
>SRA1048495 SRR035094.187030 454 Sequencing (SRP001815) 333 260 - Gln TTG [SRA]
Identical group No.824110 (1 seq.)
>SRA1048887 SRR035094.275974 454 Sequencing (SRP001815) 95 168 + Gln TTG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK