tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001815)

Anticodon = TTT

HIT: 27 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.239309 (1 seq.)
>SRA1048201 SRR035094.128343 454 Sequencing (SRP001815) 120 42 - Lys TTT [SRA]
Identical group No.244447 (3 seq.)
>WENV170612715 FUWD012667194 [FUWD] metagenome; unknown 96 20 - Lys TTT [ENA] ¢þ
>SRA1029353 SRR035087.114573 454 Sequencing (SRP001808) 272 348 + Lys TTT [SRA]
>SRA1047725 SRR035094.29822 454 Sequencing (SRP001815) 106 30 - Lys TTT [SRA]
Identical group No.264006 (1 seq.)
>SRA1048431 SRR035094.172584 454 Sequencing (SRP001815) 183 107 - Lys TTT [SRA]
Identical group No.264013 (1 seq.)
>SRA1048617 SRR035094.210804 454 Sequencing (SRP001815) 280 354 + Lys TTT [SRA]
Identical group No.272758 (3 seq.)
>WENV170612297 FUWD012568277 [FUWD] metagenome; unknown 170 97 - Lys TTT [ENA] ¢þ
>SRA1035531 SRR035089.325512 454 Sequencing (SRP001810) 224 151 - Lys TTT [SRA]
>SRA1048281 SRR035094.139047 454 Sequencing (SRP001815) 180 107 - Lys TTT [SRA]
Identical group No.415537 (1 seq.)
>SRA1047988 SRR035094.82975 454 Sequencing (SRP001815) 230 304 + Lys TTT [SRA]
Identical group No.415585 (1 seq.)
>SRA1048779 SRR035094.246880 454 Sequencing (SRP001815) 377 303 - Lys TTT [SRA]
Identical group No.415593 (1 seq.)
>SRA1048920 SRR035094.286199 454 Sequencing (SRP001815) 382 306 - Lys TTT [SRA]
Identical group No.453376 (7 seq.)
>WENV170405871 CEUG01216721 [CEUG] marine metagenome genome assembly TARA_128_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 328 403 + Lys TTT [ENA] ¢þ
>WENV170612727 FUWD012671088 [FUWD] metagenome; unknown 87 12 - Lys TTT [ENA] ¢þ
>WENV170877749 MDTC01063869 [MDTC] marine metagenome; seawater 1465 1540 + Lys TTT [ENA] ¢þ
>WENV170896616 MDTD01098344 [MDTD] marine metagenome; seawater 21072 21147 + Lys TTT [ENA] ¢þ
>SRA1026298 SRR035085.181676 454 Sequencing (SRP001806) 242 317 + Lys TTT [SRA]
>SRA1032936 SRR035088.134306 454 Sequencing (SRP001809) 365 290 - Lys TTT [SRA]
>SRA1047977 SRR035094.80515 454 Sequencing (SRP001815) 236 161 - Lys TTT [SRA]
Identical group No.453432 (5 seq.)
>WENV170623029 FUWD013133729 [FUWD] metagenome; unknown 290 215 - Lys TTT [ENA] ¢þ
>WENV170631264 FUWD013346785 [FUWD] metagenome; unknown 290 215 - Lys TTT [ENA] ¢þ
>SRA1026686 SRR035085.260401 454 Sequencing (SRP001806) 129 54 - Lys TTT [SRA]
>SRA1026697 SRR035085.262509 454 Sequencing (SRP001806) 129 54 - Lys TTT [SRA]
>SRA1048837 SRR035094.260503 454 Sequencing (SRP001815) 206 281 + Lys TTT [SRA]
Identical group No.547983 (2 seq.)
>WENV170607890 FUWD010868036 [FUWD] metagenome; unknown 260 185 - Lys TTT [ENA] ¢þ
>SRA1047741 SRR035094.32845 454 Sequencing (SRP001815) 121 196 + Lys TTT [SRA]
Identical group No.548006 (2 seq.)
>WENV170608207 FUWD010902475 [FUWD] metagenome; unknown 328 255 - Lys TTT [ENA] ¢þ
>SRA1048058 SRR035094.99534 454 Sequencing (SRP001815) 338 265 - Lys TTT [SRA]
Identical group No.548430 (4 seq.)
>WENV170612837 FUWD012700027 [FUWD] metagenome; unknown 235 310 + Lys TTT [ENA] ¢þ
>SRA1019391 SRR035082.448570 454 Sequencing (SRP001803) 76 151 + Lys TTT [SRA]
>SRA1047999 SRR035094.84957 454 Sequencing (SRP001815) 86 11 - Lys TTT [SRA]
>SRA1050315 SRR035095.235732 454 Sequencing (SRP001816) 259 334 + Lys TTT [SRA]
Identical group No.548664 (3 seq.)
>WENV170620578 FUWD013034495 [FUWD] metagenome; unknown 3001 2926 - Lys TTT [ENA] ¢þ
>WENV170628719 FUWD013251881 [FUWD] metagenome; unknown 3001 2926 - Lys TTT [ENA] ¢þ
>SRA1047785 SRR035094.41487 454 Sequencing (SRP001815) 74 149 + Lys TTT [SRA]
Identical group No.612535 (1 seq.)
>SRA1048025 SRR035094.92780 454 Sequencing (SRP001815) 361 286 - Lys TTT [SRA]
Identical group No.612536 (1 seq.)
>SRA1048027 SRR035094.94349 454 Sequencing (SRP001815) 80 155 + Lys TTT [SRA]
Identical group No.612543 (1 seq.)
>SRA1048132 SRR035094.114160 454 Sequencing (SRP001815) 480 405 - Lys TTT [SRA]
Identical group No.612544 (1 seq.)
>SRA1048137 SRR035094.114823 454 Sequencing (SRP001815) 213 285 + Lys TTT [SRA]
Identical group No.612560 (1 seq.)
>SRA1048412 SRR035094.167069 454 Sequencing (SRP001815) 387 312 - Lys TTT [SRA]
Identical group No.612567 (1 seq.)
>SRA1048541 SRR035094.196555 454 Sequencing (SRP001815) 270 345 + Lys TTT [SRA]
Identical group No.612571 (1 seq.)
>SRA1048607 SRR035094.209095 454 Sequencing (SRP001815) 150 222 + Lys TTT [SRA]
Identical group No.612590 (1 seq.)
>SRA1048793 SRR035094.249839 454 Sequencing (SRP001815) 114 39 - Lys TTT [SRA]
Identical group No.654435 (6 seq.)
>WENV170622269 FUWD013095018 [FUWD] metagenome; unknown 613 539 - Lys TTT [ENA] ¢þ
>WENV170630489 FUWD013309730 [FUWD] metagenome; unknown 613 539 - Lys TTT [ENA] ¢þ
>SRA1034336 SRR035089.60462 454 Sequencing (SRP001810) 144 70 - Lys TTT [SRA]
>SRA1034528 SRR035089.116307 454 Sequencing (SRP001810) 143 69 - Lys TTT [SRA]
>SRA1047670 SRR035094.17099 454 Sequencing (SRP001815) 375 301 - Lys TTT [SRA]
>SRA1047689 SRR035094.21371 454 Sequencing (SRP001815) 376 302 - Lys TTT [SRA]
Identical group No.672485 (6 seq.)
>WENV170607670 FUWD010846858 [FUWD] metagenome; unknown 546 474 - Lys TTT [ENA] ¢þ
>SRA1017018 SRR035082.69219 454 Sequencing (SRP001803) 160 88 - Lys TTT [SRA]
>SRA1017536 SRR035082.157743 454 Sequencing (SRP001803) 517 445 - Lys TTT [SRA]
>SRA1019301 SRR035082.432160 454 Sequencing (SRP001803) 6 78 + Lys TTT [SRA]
>SRA1030818 SRR035087.334086 454 Sequencing (SRP001808) 152 224 + Lys TTT [SRA]
>SRA1047837 SRR035094.51455 454 Sequencing (SRP001815) 11 83 + Lys TTT [SRA]
Identical group No.751682 (2 seq.)
>SRA1047791 SRR035094.42045 454 Sequencing (SRP001815) 105 179 + Lys TTT [SRA]
>SRA1048148 SRR035094.117034 454 Sequencing (SRP001815) 105 179 + Lys TTT [SRA]
Identical group No.751706 (1 seq.)
>SRA1048325 SRR035094.148085 454 Sequencing (SRP001815) 340 414 + Lys TTT [SRA]
Identical group No.794104 (3 seq.)
>WENV170612722 FUWD012669893 [FUWD] metagenome; unknown 442 369 - Lys TTT [ENA] ¢þ
>SRA1047902 SRR035094.64663 454 Sequencing (SRP001815) 453 380 - Lys TTT [SRA]
>SRA1054535 SRR035099.157564 454 Sequencing (SRP001820) 84 11 - Lys TTT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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