tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001816)

Anticodon = CAC

HIT: 12 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.272456 (8 seq.)
>WENV170611528 FUWD012341016 [FUWD] metagenome; unknown 499 423 - Val CAC [ENA] ¢þ
>WENV170623299 FUWD013145083 [FUWD] metagenome; unknown 1046 1120 + Val CAC [ENA] ¢þ
>WENV170631560 FUWD013357062 [FUWD] metagenome; unknown 364 290 - Val CAC [ENA] ¢þ
>SRA1026668 SRR035085.254263 454 Sequencing (SRP001806) 305 229 - Val CAC [SRA]
>SRA1035814 SRR035089.380834 454 Sequencing (SRP001810) 364 290 - Val CAC [SRA]
>SRA1040580 SRR035091.118543 454 Sequencing (SRP001812) 283 359 + Val CAC [SRA]
>SRA1041815 SRR035091.298278 454 Sequencing (SRP001812) 17 91 + Val CAC [SRA]
>SRA1049211 SRR035095.38768 454 Sequencing (SRP001816) 23 97 + Val CAC [SRA]
Identical group No.357547 (2 seq.)
>WENV170599538 FUWD010079024 [FUWD] metagenome; unknown 249 173 - Val CAC [ENA] ¢þ
>SRA1049478 SRR035095.83134 454 Sequencing (SRP001816) 259 183 - Val CAC [SRA]
Identical group No.372146 (2 seq.)
>SRA1049441 SRR035095.78368 454 Sequencing (SRP001816) 143 219 + Val CAC [SRA]
>SRA1050420 SRR035095.259212 454 Sequencing (SRP001816) 261 337 + Val CAC [SRA]
Identical group No.372161 (2 seq.)
>W131192364 ASLA01000049 Unclassified Omnitrophica bacterium SCGC AAA252-B19 OP3 bacterium SCGC AAA252-B19 [ASLA] 1311 1387 + Val CAC [ENA] ¡û
>SRA1049578 SRR035095.97771 454 Sequencing (SRP001816) 208 284 + Val CAC [SRA]
Identical group No.372165 (1 seq.)
>SRA1049599 SRR035095.102698 454 Sequencing (SRP001816) 318 394 + Val CAC [SRA]
Identical group No.372169 (2 seq.)
>SRA1049639 SRR035095.109384 454 Sequencing (SRP001816) 277 201 - Val CAC [SRA]
>SRA1050118 SRR035095.195101 454 Sequencing (SRP001816) 277 201 - Val CAC [SRA]
Identical group No.372181 (1 seq.)
>SRA1049848 SRR035095.147301 454 Sequencing (SRP001816) 294 218 - Val CAC [SRA]
Identical group No.654420 (7 seq.)
>WENV170612073 FUWD012496521 [FUWD] metagenome; unknown 147 221 + Val CAC [ENA] ¢þ
>SRA1028935 SRR035087.40403 454 Sequencing (SRP001808) 146 220 + Val CAC [SRA]
>SRA1029718 SRR035087.169817 454 Sequencing (SRP001808) 446 372 - Val CAC [SRA]
>SRA1031159 SRR035087.381917 454 Sequencing (SRP001808) 146 220 + Val CAC [SRA]
>SRA1033384 SRR035088.243355 454 Sequencing (SRP001809) 205 133 - Val CAC [SRA]
>SRA1034204 SRR035089.23032 454 Sequencing (SRP001810) 255 181 - Val CAC [SRA]
>SRA1050295 SRR035095.233197 454 Sequencing (SRP001816) 266 340 + Val CAC [SRA]
Identical group No.654437 (13 seq.)
>WENV170619774 FUWD013020915 [FUWD] metagenome; unknown 1025 1099 + Val CAC [ENA] ¢þ
>WENV170627893 FUWD013239179 [FUWD] metagenome; unknown 1025 1099 + Val CAC [ENA] ¢þ
>WENV170698755 LGVF01407064 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 203 277 + Val CAC [ENA] ¢þ
>SRA1032462 SRR035088.17597 454 Sequencing (SRP001809) 134 208 + Val CAC [SRA]
>SRA1032750 SRR035088.94495 454 Sequencing (SRP001809) 262 336 + Val CAC [SRA]
>SRA1033073 SRR035088.167279 454 Sequencing (SRP001809) 114 188 + Val CAC [SRA]
>SRA1033293 SRR035088.216778 454 Sequencing (SRP001809) 73 1 - Val CAC [SRA]
>SRA1033637 SRR035088.309189 454 Sequencing (SRP001809) 164 90 - Val CAC [SRA]
>SRA1034369 SRR035089.70578 454 Sequencing (SRP001810) 154 80 - Val CAC [SRA]
>SRA1035193 SRR035089.256865 454 Sequencing (SRP001810) 1 75 + Val CAC [SRA]
>SRA1048464 SRR035094.178621 454 Sequencing (SRP001815) 508 434 - Val CAC [SRA]
>SRA1048559 SRR035094.198473 454 Sequencing (SRP001815) 155 81 - Val CAC [SRA]
>SRA1049748 SRR035095.133589 454 Sequencing (SRP001816) 147 221 + Val CAC [SRA]
Identical group No.672327 (13 seq.)
>W1711136308 LVAB01000062 Thermodesulfobacteriota Syntrophobacterales bacterium Delta_03 [LVAB] 8465 8391 - Val CAC [ENA] ¡û
>WENV181229559 OFEK01000002 [OFEK] activated sludge metagenome; Anaerobic digester 176024 175950 - Val CAC [ENA] ¢þ
>WENV181413106 OGCK01028474 [OGCK] hot springs metagenome; hot spring sediment 855 781 - Val CAC [ENA] ¢þ
>WENV183701698 PDVH01000322 [PDVH] alkali sediment metagenome; glacial lake sediment 7393 7319 - Val CAC [ENA] ¢þ
>WENV183716365 PDWI01303773 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1184 1258 + Val CAC [ENA] ¢þ
>WENV170611978 FUWD012475246 [FUWD] metagenome; unknown 92 166 + Val CAC [ENA] ¢þ
>WENV170697587 LGVF01157846 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 117 191 + Val CAC [ENA] ¢þ
>SRA1029483 SRR035087.135025 454 Sequencing (SRP001808) 92 166 + Val CAC [SRA]
>SRA1029504 SRR035087.137756 454 Sequencing (SRP001808) 338 264 - Val CAC [SRA]
>SRA1049872 SRR035095.150886 454 Sequencing (SRP001816) 337 263 - Val CAC [SRA]
>SRA1050351 SRR035095.242445 454 Sequencing (SRP001816) 86 12 - Val CAC [SRA]
>W1610947428 LVAB01000062 Thermodesulfobacteriota Syntrophobacterales bacterium Delta_03 [LVAB] 8465 8391 - Val CAC [ENA] ¡û
>WENV079126 AASZ01001256 Olavius algarvensis microbiome from Mediterranean sea 2212 2288 + Val CAC [ENA]
Identical group No.720451 (1 seq.)
>SRA1050368 SRR035095.245243 454 Sequencing (SRP001816) 52 126 + Val CAC [SRA]
Identical group No.720456 (1 seq.)
>SRA1050439 SRR035095.263238 454 Sequencing (SRP001816) 112 183 + Val CAC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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