tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001816)

Anticodon = CCG

HIT: 16 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.272563 (11 seq.)
>WENV170624130 FUWD013175373 [FUWD] metagenome; unknown 8225 8301 + Arg CCG [ENA] ¢þ
>WENV170632412 FUWD013381548 [FUWD] metagenome; unknown 8225 8301 + Arg CCG [ENA] ¢þ
>SRA1030156 SRR035087.234854 454 Sequencing (SRP001808) 71 146 + Arg CCG [SRA]
>SRA1033686 SRR035088.325679 454 Sequencing (SRP001809) 473 397 - Arg CCG [SRA]
>SRA1034478 SRR035089.105695 454 Sequencing (SRP001810) 231 307 + Arg CCG [SRA]
>SRA1035021 SRR035089.220716 454 Sequencing (SRP001810) 173 248 + Arg CCG [SRA]
>SRA1047657 SRR035094.13338 454 Sequencing (SRP001815) 214 290 + Arg CCG [SRA]
>SRA1047683 SRR035094.19607 454 Sequencing (SRP001815) 296 220 - Arg CCG [SRA]
>SRA1048093 SRR035094.107205 454 Sequencing (SRP001815) 407 331 - Arg CCG [SRA]
>SRA1048166 SRR035094.121140 454 Sequencing (SRP001815) 297 221 - Arg CCG [SRA]
>SRA1049312 SRR035095.54840 454 Sequencing (SRP001816) 162 86 - Arg CCG [SRA]
Identical group No.272593 (13 seq.)
>WENV170621642 FUWD013066891 [FUWD] metagenome; unknown 1004 1080 + Arg CCG [ENA] ¢þ
>WENV170629832 FUWD013282834 [FUWD] metagenome; unknown 1004 1080 + Arg CCG [ENA] ¢þ
>WENV170723226 LSQX01259727 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 75 1 - Arg CCG [ENA] ¢þ
>SRA1029307 SRR035087.106793 454 Sequencing (SRP001808) 178 254 + Arg CCG [SRA]
>SRA1029948 SRR035087.206764 454 Sequencing (SRP001808) 178 254 + Arg CCG [SRA]
>SRA1030023 SRR035087.217992 454 Sequencing (SRP001808) 103 179 + Arg CCG [SRA]
>SRA1030483 SRR035087.285536 454 Sequencing (SRP001808) 121 45 - Arg CCG [SRA]
>SRA1032162 SRR035087.566305 454 Sequencing (SRP001808) 146 222 + Arg CCG [SRA]
>SRA1034631 SRR035089.140660 454 Sequencing (SRP001810) 289 365 + Arg CCG [SRA]
>SRA1035354 SRR035089.289269 454 Sequencing (SRP001810) 205 129 - Arg CCG [SRA]
>SRA1035816 SRR035089.381053 454 Sequencing (SRP001810) 153 77 - Arg CCG [SRA]
>SRA1036041 SRR035089.432625 454 Sequencing (SRP001810) 152 76 - Arg CCG [SRA]
>SRA1050538 SRR035095.286037 454 Sequencing (SRP001816) 187 263 + Arg CCG [SRA]
Identical group No.272808 (4 seq.)
>WENV170605120 FUWD010451263 [FUWD] metagenome; unknown 800 724 - Arg CCG [ENA] ¢þ
>SRA1035887 SRR035089.396004 454 Sequencing (SRP001810) 303 227 - Arg CCG [SRA]
>SRA1049497 SRR035095.86754 454 Sequencing (SRP001816) 176 100 - Arg CCG [SRA]
>SRA1054300 SRR035099.101695 454 Sequencing (SRP001820) 56 132 + Arg CCG [SRA]
Identical group No.321195 (3 seq.)
>WENV170612775 FUWD012686364 [FUWD] metagenome; unknown 80 154 + Arg CCG [ENA] ¢þ
>SRA1049091 SRR035095.18347 454 Sequencing (SRP001816) 90 164 + Arg CCG [SRA]
>SRA1054426 SRR035099.131535 454 Sequencing (SRP001820) 422 496 + Arg CCG [SRA]
Identical group No.343532 (4 seq.)
>W1711137190 LVBB01000088 Planctomycetota Phycisphaerales bacterium Planc_01 [LVBB] 4454 4381 - Arg CCG [ENA] ¡û
>WENV181413605 OGCK01096066 [OGCK] hot springs metagenome; hot spring sediment 441 368 - Arg CCG [ENA] ¢þ
>SRA1050054 SRR035095.184020 454 Sequencing (SRP001816) 286 213 - Arg CCG [SRA]
>W1610948310 LVBB01000088 Planctomycetota Phycisphaerales bacterium Planc_01 [LVBB] 4454 4381 - Arg CCG [ENA] ¡û
Identical group No.357543 (4 seq.)
>WENV170599392 FUWD010073229 [FUWD] metagenome; unknown 15 91 + Arg CCG [ENA] ¢þ
>SRA1032894 SRR035088.124021 454 Sequencing (SRP001809) 101 177 + Arg CCG [SRA]
>SRA1033473 SRR035088.268160 454 Sequencing (SRP001809) 15 91 + Arg CCG [SRA]
>SRA1049287 SRR035095.50530 454 Sequencing (SRP001816) 97 173 + Arg CCG [SRA]
Identical group No.358683 (7 seq.)
>WENV170621363 FUWD013056620 [FUWD] metagenome; unknown 646 570 - Arg CCG [ENA] ¢þ
>WENV170629542 FUWD013273023 [FUWD] metagenome; unknown 646 570 - Arg CCG [ENA] ¢þ
>SRA1033019 SRR035088.152866 454 Sequencing (SRP001809) 114 190 + Arg CCG [SRA]
>SRA1041901 SRR035091.313159 454 Sequencing (SRP001812) 94 18 - Arg CCG [SRA]
>SRA1042684 SRR035091.429478 454 Sequencing (SRP001812) 94 18 - Arg CCG [SRA]
>SRA1044759 SRR035092.335705 454 Sequencing (SRP001813) 293 217 - Arg CCG [SRA]
>SRA1050490 SRR035095.274282 454 Sequencing (SRP001816) 223 147 - Arg CCG [SRA]
Identical group No.372126 (3 seq.)
>WENV170001102 AGBJ01004535 [AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East 726 802 + Arg CCG [ENA] ¢þ
>SRA1048731 SRR035094.236420 454 Sequencing (SRP001815) 157 233 + Arg CCG [SRA]
>SRA1049158 SRR035095.30286 454 Sequencing (SRP001816) 172 248 + Arg CCG [SRA]
Identical group No.372144 (1 seq.)
>SRA1049354 SRR035095.62191 454 Sequencing (SRP001816) 309 384 + Arg CCG [SRA]
Identical group No.372224 (3 seq.)
>WENV170528847 CEWJ01079998 [CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 163 239 + Arg CCG [ENA] ¢þ
>WENV170900929 MDTD01161855 [MDTD] marine metagenome; seawater 6087 6011 - Arg CCG [ENA] ¢þ
>SRA1050482 SRR035095.271732 454 Sequencing (SRP001816) 244 168 - Arg CCG [SRA]
Identical group No.512644 (14 seq.)
>W131208420 ATHJ01000076 Thermodesulfobacteriota Desulfococcus multivorans DSM 2059 [ATHJ] 172338 172413 + Arg CCG [ENA] ¡û
>C171038086 CP015381 Thermodesulfobacteriota Desulfococcus multivorans DSM 2059 [CP015381] 1405893 1405818 - Arg CCG - ¡û
>C171100892 CP019913 Thermodesulfobacteriota Desulfococcus multivorans DSM 2059 [CP019913] 1406246 1406171 - Arg CCG - ¡û
>WENV180274928 OBHO01012281 [OBHO] metagenome; water 98 173 + Arg CCG [ENA] ¢þ
>WENV180346141 OBLN01030328 [OBLN] sediment metagenome; sediment 585 660 + Arg CCG [ENA] ¢þ
>WENV170623105 FUWD013136630 [FUWD] metagenome; unknown 695 770 + Arg CCG [ENA] ¢þ
>WENV170697367 LGVF01122655 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 223 148 - Arg CCG [ENA] ¢þ
>SRA1033684 SRR035088.324319 454 Sequencing (SRP001809) 45 120 + Arg CCG [SRA]
>SRA1047772 SRR035094.38497 454 Sequencing (SRP001815) 396 321 - Arg CCG [SRA]
>SRA1049146 SRR035095.28072 454 Sequencing (SRP001816) 351 426 + Arg CCG [SRA]
>SRA1049192 SRR035095.35150 454 Sequencing (SRP001816) 211 286 + Arg CCG [SRA]
>SRA1049631 SRR035095.108085 454 Sequencing (SRP001816) 211 286 + Arg CCG [SRA]
>SRA1050312 SRR035095.235400 454 Sequencing (SRP001816) 212 287 + Arg CCG [SRA]
>W1710600539 FUWN01000006 Thermodesulfobacteriota Desulfococcus multivorans DSM 2059 [FUWN] 46476 46401 - Arg CCG [ENA] ¡û
Identical group No.563096 (1 seq.)
>SRA1049613 SRR035095.104744 454 Sequencing (SRP001816) 81 153 + Arg CCG [SRA]
Identical group No.686056 (9 seq.)
>WENV170620081 FUWD013025463 [FUWD] metagenome; unknown 5538 5610 + Arg CCG [ENA] ¢þ
>WENV170628206 FUWD013243365 [FUWD] metagenome; unknown 5538 5610 + Arg CCG [ENA] ¢þ
>WENV170697211 LGVF01095749 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 116 44 - Arg CCG [ENA] ¢þ
>SRA1037763 SRR035090.190053 454 Sequencing (SRP001811) 89 17 - Arg CCG [SRA]
>SRA1048207 SRR035094.128915 454 Sequencing (SRP001815) 269 197 - Arg CCG [SRA]
>SRA1049738 SRR035095.129731 454 Sequencing (SRP001816) 476 404 - Arg CCG [SRA]
>SRA1050529 SRR035095.283404 454 Sequencing (SRP001816) 80 152 + Arg CCG [SRA]
>SRA1054210 SRR035099.85080 454 Sequencing (SRP001820) 177 249 + Arg CCG [SRA]
>SRA1054848 SRR035099.228940 454 Sequencing (SRP001820) 255 183 - Arg CCG [SRA]
Identical group No.711376 (5 seq.)
>WENV170622018 FUWD013084120 [FUWD] metagenome; unknown 1519 1593 + Arg CCG [ENA] ¢þ
>WENV170630221 FUWD013299288 [FUWD] metagenome; unknown 1519 1593 + Arg CCG [ENA] ¢þ
>SRA1037671 SRR035090.172361 454 Sequencing (SRP001811) 56 130 + Arg CCG [SRA]
>SRA1049845 SRR035095.147008 454 Sequencing (SRP001816) 399 472 + Arg CCG [SRA]
>SRA1050390 SRR035095.250836 454 Sequencing (SRP001816) 376 450 + Arg CCG [SRA]
Identical group No.720408 (3 seq.)
>SRA1040010 SRR035091.16511 454 Sequencing (SRP001812) 305 233 - Arg CCG [SRA]
>SRA1049364 SRR035095.64132 454 Sequencing (SRP001816) 285 357 + Arg CCG [SRA]
>SRA1050467 SRR035095.269496 454 Sequencing (SRP001816) 225 297 + Arg CCG [SRA]
Identical group No.720453 (1 seq.)
>SRA1050397 SRR035095.252891 454 Sequencing (SRP001816) 329 403 + Arg CCG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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