tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001816)

Anticodon = CGC

HIT: 12 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.453289 (10 seq.)
>WENV170625508 FUWD013199465 [FUWD] metagenome; unknown 526 451 - Ala CGC [ENA] ¢þ
>WENV170633738 FUWD013401836 [FUWD] metagenome; unknown 526 451 - Ala CGC [ENA] ¢þ
>SRA1025818 SRR035085.88766 454 Sequencing (SRP001806) 190 265 + Ala CGC [SRA]
>SRA1034840 SRR035089.183711 454 Sequencing (SRP001810) 76 1 - Ala CGC [SRA]
>SRA1047742 SRR035094.32863 454 Sequencing (SRP001815) 323 248 - Ala CGC [SRA]
>SRA1048094 SRR035094.107319 454 Sequencing (SRP001815) 443 368 - Ala CGC [SRA]
>SRA1048909 SRR035094.283227 454 Sequencing (SRP001815) 277 352 + Ala CGC [SRA]
>SRA1050164 SRR035095.204107 454 Sequencing (SRP001816) 238 163 - Ala CGC [SRA]
>SRA1050314 SRR035095.235562 454 Sequencing (SRP001816) 258 183 - Ala CGC [SRA]
>SRA1050466 SRR035095.268840 454 Sequencing (SRP001816) 124 49 - Ala CGC [SRA]
Identical group No.453301 (18 seq.)
>WENV170599810 FUWD010093140 [FUWD] metagenome; unknown 98 23 - Ala CGC [ENA] ¢þ
>WENV170616607 FUWD012893975 [FUWD] metagenome; unknown 454 379 - Ala CGC [ENA] ¢þ
>WENV170624460 FUWD013182011 [FUWD] metagenome; unknown 297 222 - Ala CGC [ENA] ¢þ
>WENV170632745 FUWD013386866 [FUWD] metagenome; unknown 297 222 - Ala CGC [ENA] ¢þ
>WENV170698493 LGVF01347033 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 340 415 + Ala CGC [ENA] ¢þ
>SRA1025895 SRR035085.104932 454 Sequencing (SRP001806) 291 216 - Ala CGC [SRA]
>SRA1029030 SRR035087.61205 454 Sequencing (SRP001808) 181 106 - Ala CGC [SRA]
>SRA1029222 SRR035087.94344 454 Sequencing (SRP001808) 248 173 - Ala CGC [SRA]
>SRA1029279 SRR035087.102080 454 Sequencing (SRP001808) 7 82 + Ala CGC [SRA]
>SRA1029387 SRR035087.119831 454 Sequencing (SRP001808) 181 106 - Ala CGC [SRA]
>SRA1029856 SRR035087.192688 454 Sequencing (SRP001808) 301 376 + Ala CGC [SRA]
>SRA1034771 SRR035089.169518 454 Sequencing (SRP001810) 444 519 + Ala CGC [SRA]
>SRA1035237 SRR035089.265471 454 Sequencing (SRP001810) 267 342 + Ala CGC [SRA]
>SRA1036282 SRR035089.487511 454 Sequencing (SRP001810) 267 342 + Ala CGC [SRA]
>SRA1048414 SRR035094.167855 454 Sequencing (SRP001815) 130 205 + Ala CGC [SRA]
>SRA1048502 SRR035094.187989 454 Sequencing (SRP001815) 137 212 + Ala CGC [SRA]
>SRA1048510 SRR035094.190647 454 Sequencing (SRP001815) 139 214 + Ala CGC [SRA]
>SRA1049159 SRR035095.30316 454 Sequencing (SRP001816) 283 358 + Ala CGC [SRA]
Identical group No.453840 (10 seq.)
>WENV170607702 FUWD010850342 [FUWD] metagenome; unknown 320 246 - Ala CGC [ENA] ¢þ
>WENV170612056 FUWD012491973 [FUWD] metagenome; unknown 99 173 + Ala CGC [ENA] ¢þ
>SRA1018627 SRR035082.324799 454 Sequencing (SRP001803) 323 249 - Ala CGC [SRA]
>SRA1028850 SRR035087.20391 454 Sequencing (SRP001808) 135 209 + Ala CGC [SRA]
>SRA1030746 SRR035087.325296 454 Sequencing (SRP001808) 129 203 + Ala CGC [SRA]
>SRA1032885 SRR035088.121820 454 Sequencing (SRP001809) 182 108 - Ala CGC [SRA]
>SRA1036361 SRR035089.501597 454 Sequencing (SRP001810) 131 55 - Ala CGC [SRA]
>SRA1036520 SRR035089.536623 454 Sequencing (SRP001810) 131 55 - Ala CGC [SRA]
>SRA1048668 SRR035094.221533 454 Sequencing (SRP001815) 119 193 + Ala CGC [SRA]
>SRA1049481 SRR035095.83546 454 Sequencing (SRP001816) 112 36 - Ala CGC [SRA]
Identical group No.484497 (5 seq.)
>W1711317597 MAXL01000040 Thermodesulfobacteriota Desulfobacterales bacterium S5133MH16 [MAXL] 15180 15105 - Ala CGC [ENA] ¡û
>WENV170697026 LGVF01073069 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 4460 4385 - Ala CGC [ENA] ¢þ
>SRA1031816 SRR035087.494480 454 Sequencing (SRP001808) 169 94 - Ala CGC [SRA]
>SRA1049416 SRR035095.74390 454 Sequencing (SRP001816) 106 31 - Ala CGC [SRA]
>SRA1050485 SRR035095.272440 454 Sequencing (SRP001816) 419 491 + Ala CGC [SRA]
Identical group No.547530 (11 seq.)
>WENV170600185 FUWD010112598 [FUWD] metagenome; unknown 92 167 + Ala CGC [ENA] ¢þ
>WENV170617534 FUWD012929050 [FUWD] metagenome; unknown 161 236 + Ala CGC [ENA] ¢þ
>WENV170625232 FUWD013193874 [FUWD] metagenome; unknown 1483 1558 + Ala CGC [ENA] ¢þ
>WENV170633483 FUWD013396843 [FUWD] metagenome; unknown 1483 1558 + Ala CGC [ENA] ¢þ
>SRA1032580 SRR035088.53753 454 Sequencing (SRP001809) 117 42 - Ala CGC [SRA]
>SRA1032751 SRR035088.94598 454 Sequencing (SRP001809) 66 141 + Ala CGC [SRA]
>SRA1033249 SRR035088.206053 454 Sequencing (SRP001809) 274 199 - Ala CGC [SRA]
>SRA1033303 SRR035088.219940 454 Sequencing (SRP001809) 449 524 + Ala CGC [SRA]
>SRA1033317 SRR035088.223162 454 Sequencing (SRP001809) 212 137 - Ala CGC [SRA]
>SRA1033689 SRR035088.325919 454 Sequencing (SRP001809) 161 236 + Ala CGC [SRA]
>SRA1050684 SRR035095.326223 454 Sequencing (SRP001816) 224 149 - Ala CGC [SRA]
Identical group No.548918 (4 seq.)
>WENV170625270 FUWD013194611 [FUWD] metagenome; unknown 2225 2297 + Ala CGC [ENA] ¢þ
>WENV170633512 FUWD013397488 [FUWD] metagenome; unknown 2225 2297 + Ala CGC [ENA] ¢þ
>SRA1048866 SRR035094.266604 454 Sequencing (SRP001815) 118 46 - Ala CGC [SRA]
>SRA1050360 SRR035095.243470 454 Sequencing (SRP001816) 369 297 - Ala CGC [SRA]
Identical group No.563060 (1 seq.)
>SRA1049128 SRR035095.25612 454 Sequencing (SRP001816) 99 24 - Ala CGC [SRA]
Identical group No.563066 (1 seq.)
>SRA1049220 SRR035095.39890 454 Sequencing (SRP001816) 341 416 + Ala CGC [SRA]
Identical group No.563068 (1 seq.)
>SRA1049250 SRR035095.44478 454 Sequencing (SRP001816) 318 393 + Ala CGC [SRA]
Identical group No.563080 (1 seq.)
>SRA1049433 SRR035095.77355 454 Sequencing (SRP001816) 381 454 + Ala CGC [SRA]
Identical group No.563116 (1 seq.)
>SRA1049923 SRR035095.160895 454 Sequencing (SRP001816) 92 17 - Ala CGC [SRA]
Identical group No.720407 (1 seq.)
>SRA1049346 SRR035095.61000 454 Sequencing (SRP001816) 339 265 - Ala CGC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK