tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001816)

Anticodon = CTC

HIT: 23 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.240920 (7 seq.)
>WENV170622848 FUWD013123572 [FUWD] metagenome; unknown 1324 1401 + Glu CTC [ENA] ¢þ
>WENV170626916 FUWD013230053 [FUWD] metagenome; unknown 4 81 + Glu CTC [ENA] ¢þ
>WENV170631066 FUWD013337122 [FUWD] metagenome; unknown 1324 1401 + Glu CTC [ENA] ¢þ
>SRA1032249 SRR035087.587382 454 Sequencing (SRP001808) 359 282 - Glu CTC [SRA]
>SRA1036091 SRR035089.444392 454 Sequencing (SRP001810) 180 103 - Glu CTC [SRA]
>SRA1040166 SRR035091.51999 454 Sequencing (SRP001812) 175 252 + Glu CTC [SRA]
>SRA1049645 SRR035095.110608 454 Sequencing (SRP001816) 95 18 - Glu CTC [SRA]
Identical group No.254148 (3 seq.)
>WENV170612199 FUWD012532791 [FUWD] metagenome; unknown 38 114 + Glu CTC [ENA] ¢þ
>SRA1033548 SRR035088.286607 454 Sequencing (SRP001809) 38 114 + Glu CTC [SRA]
>SRA1049586 SRR035095.99009 454 Sequencing (SRP001816) 280 204 - Glu CTC [SRA]
Identical group No.256313 (1 seq.)
>SRA1049415 SRR035095.74195 454 Sequencing (SRP001816) 174 251 + Glu CTC [SRA]
Identical group No.256321 (1 seq.)
>SRA1050012 SRR035095.176850 454 Sequencing (SRP001816) 196 119 - Glu CTC [SRA]
Identical group No.484321 (4 seq.)
>WENV170625883 FUWD013208264 [FUWD] metagenome; unknown 1699 1625 - Glu CTC [ENA] ¢þ
>WENV170634100 FUWD013409884 [FUWD] metagenome; unknown 1699 1625 - Glu CTC [ENA] ¢þ
>SRA1030591 SRR035087.301302 454 Sequencing (SRP001808) 502 428 - Glu CTC [SRA]
>SRA1049437 SRR035095.77410 454 Sequencing (SRP001816) 193 267 + Glu CTC [SRA]
Identical group No.547696 (3 seq.)
>WENV170603360 FUWD010305329 [FUWD] metagenome; unknown 610 685 + Glu CTC [ENA] ¢þ
>SRA1047991 SRR035094.83422 454 Sequencing (SRP001815) 84 11 - Glu CTC [SRA]
>SRA1049395 SRR035095.70031 454 Sequencing (SRP001816) 128 203 + Glu CTC [SRA]
Identical group No.548428 (3 seq.)
>WENV170612823 FUWD012696879 [FUWD] metagenome; unknown 120 195 + Glu CTC [ENA] ¢þ
>SRA1050001 SRR035095.174447 454 Sequencing (SRP001816) 130 205 + Glu CTC [SRA]
>SRA1050584 SRR035095.296684 454 Sequencing (SRP001816) 130 205 + Glu CTC [SRA]
Identical group No.548920 (5 seq.)
>WENV170625365 FUWD013196638 [FUWD] metagenome; unknown 1397 1472 + Glu CTC [ENA] ¢þ
>WENV170633605 FUWD013399285 [FUWD] metagenome; unknown 1397 1472 + Glu CTC [ENA] ¢þ
>SRA1033048 SRR035088.158532 454 Sequencing (SRP001809) 64 139 + Glu CTC [SRA]
>SRA1033567 SRR035088.290067 454 Sequencing (SRP001809) 400 325 - Glu CTC [SRA]
>SRA1049928 SRR035095.162444 454 Sequencing (SRP001816) 47 122 + Glu CTC [SRA]
Identical group No.563070 (1 seq.)
>SRA1049282 SRR035095.49769 454 Sequencing (SRP001816) 445 517 + Glu CTC [SRA]
Identical group No.563128 (1 seq.)
>SRA1050154 SRR035095.201755 454 Sequencing (SRP001816) 130 58 - Glu CTC [SRA]
Identical group No.563135 (1 seq.)
>SRA1050281 SRR035095.229454 454 Sequencing (SRP001816) 401 328 - Glu CTC [SRA]
Identical group No.563139 (1 seq.)
>SRA1050307 SRR035095.234437 454 Sequencing (SRP001816) 278 203 - Glu CTC [SRA]
Identical group No.563146 (1 seq.)
>SRA1050489 SRR035095.273562 454 Sequencing (SRP001816) 197 122 - Glu CTC [SRA]
Identical group No.563160 (1 seq.)
>SRA1050700 SRR035095.330295 454 Sequencing (SRP001816) 132 207 + Glu CTC [SRA]
Identical group No.654278 (13 seq.)
>WENV181412628 OGCK01003108 [OGCK] hot springs metagenome; hot spring sediment 2979 3053 + Glu CTC [ENA] ¢þ
>WENV183514318 OMKS01015995 [OMKS] sediment metagenome; hot spring sediment 3103 3029 - Glu CTC [ENA] ¢þ
>WENV170619704 FUWD013019407 [FUWD] metagenome; unknown 5232 5306 + Glu CTC [ENA] ¢þ
>WENV170627825 FUWD013237795 [FUWD] metagenome; unknown 5232 5306 + Glu CTC [ENA] ¢þ
>SRA1025802 SRR035085.86401 454 Sequencing (SRP001806) 227 301 + Glu CTC [SRA]
>SRA1030947 SRR035087.353014 454 Sequencing (SRP001808) 120 46 - Glu CTC [SRA]
>SRA1031109 SRR035087.375194 454 Sequencing (SRP001808) 94 20 - Glu CTC [SRA]
>SRA1048190 SRR035094.125621 454 Sequencing (SRP001815) 89 15 - Glu CTC [SRA]
>SRA1048357 SRR035094.155999 454 Sequencing (SRP001815) 516 442 - Glu CTC [SRA]
>SRA1048631 SRR035094.212526 454 Sequencing (SRP001815) 379 305 - Glu CTC [SRA]
>SRA1049850 SRR035095.147453 454 Sequencing (SRP001816) 400 326 - Glu CTC [SRA]
>SRA1050150 SRR035095.201207 454 Sequencing (SRP001816) 401 327 - Glu CTC [SRA]
>SRA1050206 SRR035095.212049 454 Sequencing (SRP001816) 514 440 - Glu CTC [SRA]
Identical group No.654509 (3 seq.)
>WENV170612817 FUWD012695914 [FUWD] metagenome; unknown 102 176 + Glu CTC [ENA] ¢þ
>SRA1035194 SRR035089.257432 454 Sequencing (SRP001810) 101 175 + Glu CTC [SRA]
>SRA1049910 SRR035095.158260 454 Sequencing (SRP001816) 221 295 + Glu CTC [SRA]
Identical group No.654599 (27 seq.)
>WENV170626768 FUWD013229350 [FUWD] metagenome; unknown 2293 2367 + Glu CTC [ENA] ¢þ
>SRA1017537 SRR035082.158122 454 Sequencing (SRP001803) 71 145 + Glu CTC [SRA]
>SRA1019306 SRR035082.433029 454 Sequencing (SRP001803) 127 198 + Glu CTC [SRA]
>SRA1036177 SRR035089.463450 454 Sequencing (SRP001810) 136 210 + Glu CTC [SRA]
>SRA1036623 SRR035089.565542 454 Sequencing (SRP001810) 254 180 - Glu CTC [SRA]
>SRA1040560 SRR035091.115345 454 Sequencing (SRP001812) 371 297 - Glu CTC [SRA]
>SRA1040982 SRR035091.177378 454 Sequencing (SRP001812) 31 105 + Glu CTC [SRA]
>SRA1041075 SRR035091.192644 454 Sequencing (SRP001812) 143 217 + Glu CTC [SRA]
>SRA1041829 SRR035091.301289 454 Sequencing (SRP001812) 18 92 + Glu CTC [SRA]
>SRA1042238 SRR035091.360315 454 Sequencing (SRP001812) 230 156 - Glu CTC [SRA]
>SRA1042439 SRR035091.386795 454 Sequencing (SRP001812) 95 21 - Glu CTC [SRA]
>SRA1042825 SRR035091.451214 454 Sequencing (SRP001812) 151 77 - Glu CTC [SRA]
>SRA1042898 SRR035091.463246 454 Sequencing (SRP001812) 351 277 - Glu CTC [SRA]
>SRA1043171 SRR035092.63100 454 Sequencing (SRP001813) 166 240 + Glu CTC [SRA]
>SRA1048461 SRR035094.178337 454 Sequencing (SRP001815) 22 96 + Glu CTC [SRA]
>SRA1048582 SRR035094.203213 454 Sequencing (SRP001815) 169 243 + Glu CTC [SRA]
>SRA1048947 SRR035094.295108 454 Sequencing (SRP001815) 254 328 + Glu CTC [SRA]
>SRA1048965 SRR035094.298170 454 Sequencing (SRP001815) 255 329 + Glu CTC [SRA]
>SRA1049717 SRR035095.124322 454 Sequencing (SRP001816) 397 323 - Glu CTC [SRA]
>SRA1049941 SRR035095.163761 454 Sequencing (SRP001816) 252 326 + Glu CTC [SRA]
>SRA1049970 SRR035095.170264 454 Sequencing (SRP001816) 117 43 - Glu CTC [SRA]
>SRA1050172 SRR035095.205889 454 Sequencing (SRP001816) 117 43 - Glu CTC [SRA]
>SRA1050396 SRR035095.252523 454 Sequencing (SRP001816) 117 43 - Glu CTC [SRA]
>SRA1050481 SRR035095.271638 454 Sequencing (SRP001816) 200 126 - Glu CTC [SRA]
>SRA1050530 SRR035095.283863 454 Sequencing (SRP001816) 117 43 - Glu CTC [SRA]
>SRA1050547 SRR035095.289269 454 Sequencing (SRP001816) 117 43 - Glu CTC [SRA]
>SRA1050646 SRR035095.312598 454 Sequencing (SRP001816) 117 43 - Glu CTC [SRA]
Identical group No.711365 (4 seq.)
>WENV170621808 FUWD013073804 [FUWD] metagenome; unknown 416 342 - Glu CTC [ENA] ¢þ
>WENV170630003 FUWD013289440 [FUWD] metagenome; unknown 416 342 - Glu CTC [ENA] ¢þ
>SRA1021878 SRR035083.322490 454 Sequencing (SRP001804) 228 302 + Glu CTC [SRA]
>SRA1050562 SRR035095.293422 454 Sequencing (SRP001816) 355 281 - Glu CTC [SRA]
Identical group No.711482 (5 seq.)
>WENV170623666 FUWD013164293 [FUWD] metagenome; unknown 1011 937 - Glu CTC [ENA] ¢þ
>WENV170631947 FUWD013372959 [FUWD] metagenome; unknown 1011 937 - Glu CTC [ENA] ¢þ
>SRA1016954 SRR035082.59080 454 Sequencing (SRP001803) 209 283 + Glu CTC [SRA]
>SRA1019083 SRR035082.398823 454 Sequencing (SRP001803) 108 182 + Glu CTC [SRA]
>SRA1050208 SRR035095.212517 454 Sequencing (SRP001816) 244 170 - Glu CTC [SRA]
Identical group No.720398 (1 seq.)
>SRA1049224 SRR035095.40510 454 Sequencing (SRP001816) 251 177 - Glu CTC [SRA]
Identical group No.720420 (1 seq.)
>SRA1049690 SRR035095.120307 454 Sequencing (SRP001816) 434 508 + Glu CTC [SRA]
Identical group No.720448 (2 seq.)
>SRA1050268 SRR035095.225916 454 Sequencing (SRP001816) 63 137 + Glu CTC [SRA]
>SRA1050639 SRR035095.311180 454 Sequencing (SRP001816) 65 139 + Glu CTC [SRA]
Identical group No.720449 (1 seq.)
>SRA1050310 SRR035095.234840 454 Sequencing (SRP001816) 252 324 + Glu CTC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK