tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001816)

Anticodon = GAG

HIT: 35 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.80337 (1 seq.)
>SRA1049178 SRR035095.33478 454 Sequencing (SRP001816) 123 209 + Leu GAG [SRA]
Identical group No.80343 (1 seq.)
>SRA1049563 SRR035095.96614 454 Sequencing (SRP001816) 58 143 + Leu GAG [SRA]
Identical group No.80350 (1 seq.)
>SRA1050180 SRR035095.206992 454 Sequencing (SRP001816) 122 207 + Leu GAG [SRA]
Identical group No.80353 (1 seq.)
>SRA1050613 SRR035095.305951 454 Sequencing (SRP001816) 223 311 + Leu GAG [SRA]
Identical group No.87096 (10 seq.)
>WENV170624864 FUWD013188183 [FUWD] metagenome; unknown 548 635 + Leu GAG [ENA] ¢þ
>WENV170633130 FUWD013391978 [FUWD] metagenome; unknown 548 635 + Leu GAG [ENA] ¢þ
>SRA1030081 SRR035087.224642 454 Sequencing (SRP001808) 131 218 + Leu GAG [SRA]
>SRA1030887 SRR035087.343177 454 Sequencing (SRP001808) 111 24 - Leu GAG [SRA]
>SRA1033407 SRR035088.248512 454 Sequencing (SRP001809) 125 212 + Leu GAG [SRA]
>SRA1036249 SRR035089.480215 454 Sequencing (SRP001810) 297 384 + Leu GAG [SRA]
>SRA1038331 SRR035090.289082 454 Sequencing (SRP001811) 335 422 + Leu GAG [SRA]
>SRA1049361 SRR035095.63976 454 Sequencing (SRP001816) 305 218 - Leu GAG [SRA]
>SRA1049771 SRR035095.136865 454 Sequencing (SRP001816) 306 219 - Leu GAG [SRA]
>SRA1050109 SRR035095.194417 454 Sequencing (SRP001816) 281 368 + Leu GAG [SRA]
Identical group No.87105 (7 seq.)
>WENV170622852 FUWD013123740 [FUWD] metagenome; unknown 406 321 - Leu GAG [ENA] ¢þ
>WENV170631070 FUWD013337290 [FUWD] metagenome; unknown 406 321 - Leu GAG [ENA] ¢þ
>SRA1036481 SRR035089.531684 454 Sequencing (SRP001810) 111 196 + Leu GAG [SRA]
>SRA1043410 SRR035092.110344 454 Sequencing (SRP001813) 151 236 + Leu GAG [SRA]
>SRA1049089 SRR035095.18252 454 Sequencing (SRP001816) 349 434 + Leu GAG [SRA]
>SRA1049216 SRR035095.39326 454 Sequencing (SRP001816) 350 435 + Leu GAG [SRA]
>SRA1049236 SRR035095.42479 454 Sequencing (SRP001816) 349 434 + Leu GAG [SRA]
Identical group No.98585 (4 seq.)
>WENV170618769 FUWD012985740 [FUWD] metagenome; unknown 337 423 + Leu GAG [ENA] ¢þ
>SRA1042109 SRR035091.339740 454 Sequencing (SRP001812) 310 396 + Leu GAG [SRA]
>SRA1042547 SRR035091.406471 454 Sequencing (SRP001812) 115 29 - Leu GAG [SRA]
>SRA1049711 SRR035095.123306 454 Sequencing (SRP001816) 444 358 - Leu GAG [SRA]
Identical group No.100575 (1 seq.)
>SRA1050402 SRR035095.255370 454 Sequencing (SRP001816) 319 232 - Leu GAG [SRA]
Identical group No.112570 (3 seq.)
>WENV170603368 FUWD010306016 [FUWD] metagenome; unknown 514 600 + Leu GAG [ENA] ¢þ
>SRA1034614 SRR035089.137355 454 Sequencing (SRP001810) 73 159 + Leu GAG [SRA]
>SRA1050320 SRR035095.236650 454 Sequencing (SRP001816) 288 374 + Leu GAG [SRA]
Identical group No.112591 (6 seq.)
>WENV170603294 FUWD010299293 [FUWD] metagenome; unknown 474 388 - Leu GAG [ENA] ¢þ
>WENV170605016 FUWD010441483 [FUWD] metagenome; unknown 561 475 - Leu GAG [ENA] ¢þ
>SRA1029122 SRR035087.78137 454 Sequencing (SRP001808) 209 295 + Leu GAG [SRA]
>SRA1033784 SRR035088.353947 454 Sequencing (SRP001809) 78 164 + Leu GAG [SRA]
>SRA1035018 SRR035089.219903 454 Sequencing (SRP001810) 109 195 + Leu GAG [SRA]
>SRA1049890 SRR035095.154948 454 Sequencing (SRP001816) 280 366 + Leu GAG [SRA]
Identical group No.118379 (5 seq.)
>WENV170605125 FUWD010451742 [FUWD] metagenome; unknown 181 267 + Leu GAG [ENA] ¢þ
>SRA1031935 SRR035087.515567 454 Sequencing (SRP001808) 164 78 - Leu GAG [SRA]
>SRA1033321 SRR035088.223543 454 Sequencing (SRP001809) 234 148 - Leu GAG [SRA]
>SRA1048997 SRR035094.307632 454 Sequencing (SRP001815) 132 46 - Leu GAG [SRA]
>SRA1049993 SRR035095.173437 454 Sequencing (SRP001816) 57 143 + Leu GAG [SRA]
Identical group No.131516 (2 seq.)
>WENV170601715 FUWD010189482 [FUWD] metagenome; unknown 4 88 + Leu GAG [ENA] ¢þ
>SRA1049241 SRR035095.42921 454 Sequencing (SRP001816) 108 192 + Leu GAG [SRA]
Identical group No.131715 (3 seq.)
>WENV170612798 FUWD012691593 [FUWD] metagenome; unknown 328 414 + Leu GAG [ENA] ¢þ
>SRA1049535 SRR035095.93250 454 Sequencing (SRP001816) 338 424 + Leu GAG [SRA]
>SRA1049667 SRR035095.113801 454 Sequencing (SRP001816) 339 425 + Leu GAG [SRA]
Identical group No.131717 (4 seq.)
>WENV170612833 FUWD012699194 [FUWD] metagenome; unknown 124 40 - Leu GAG [ENA] ¢þ
>SRA1016887 SRR035082.47455 454 Sequencing (SRP001803) 100 16 - Leu GAG [SRA]
>SRA1050234 SRR035095.218208 454 Sequencing (SRP001816) 134 50 - Leu GAG [SRA]
>SRA1050688 SRR035095.327101 454 Sequencing (SRP001816) 134 50 - Leu GAG [SRA]
Identical group No.131828 (8 seq.)
>WENV170624453 FUWD013181970 [FUWD] metagenome; unknown 3116 3030 - Leu GAG [ENA] ¢þ
>WENV170632740 FUWD013386831 [FUWD] metagenome; unknown 3116 3030 - Leu GAG [ENA] ¢þ
>SRA1048019 SRR035094.91215 454 Sequencing (SRP001815) 72 158 + Leu GAG [SRA]
>SRA1048255 SRR035094.135450 454 Sequencing (SRP001815) 161 247 + Leu GAG [SRA]
>SRA1049577 SRR035095.97396 454 Sequencing (SRP001816) 259 345 + Leu GAG [SRA]
>SRA1049609 SRR035095.104519 454 Sequencing (SRP001816) 350 264 - Leu GAG [SRA]
>SRA1049722 SRR035095.126938 454 Sequencing (SRP001816) 368 454 + Leu GAG [SRA]
>SRA1050601 SRR035095.299655 454 Sequencing (SRP001816) 150 236 + Leu GAG [SRA]
Identical group No.134861 (1 seq.)
>SRA1049399 SRR035095.71216 454 Sequencing (SRP001816) 326 242 - Leu GAG [SRA]
Identical group No.134865 (1 seq.)
>SRA1049612 SRR035095.104679 454 Sequencing (SRP001816) 71 157 + Leu GAG [SRA]
Identical group No.134874 (1 seq.)
>SRA1050251 SRR035095.221665 454 Sequencing (SRP001816) 115 29 - Leu GAG [SRA]
Identical group No.134875 (1 seq.)
>SRA1050399 SRR035095.254412 454 Sequencing (SRP001816) 367 279 - Leu GAG [SRA]
Identical group No.165652 (5 seq.)
>WENV170605210 FUWD010458471 [FUWD] metagenome; unknown 471 556 + Leu GAG [ENA] ¢þ
>WENV170694425 LGVD01054231 [LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at 86 1 - Leu GAG [ENA] ¢þ
>WENV170698986 LGVF01455492 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 411 496 + Leu GAG [ENA] ¢þ
>SRA1049975 SRR035095.170633 454 Sequencing (SRP001816) 201 286 + Leu GAG [SRA]
>SRA1050340 SRR035095.240929 454 Sequencing (SRP001816) 148 63 - Leu GAG [SRA]
Identical group No.165813 (3 seq.)
>WENV170623603 FUWD013160023 [FUWD] metagenome; unknown 742 658 - Leu GAG [ENA] ¢þ
>WENV170631880 FUWD013369518 [FUWD] metagenome; unknown 742 658 - Leu GAG [ENA] ¢þ
>SRA1050590 SRR035095.297760 454 Sequencing (SRP001816) 246 162 - Leu GAG [SRA]
Identical group No.167777 (1 seq.)
>SRA1049477 SRR035095.82976 454 Sequencing (SRP001816) 240 157 - Leu GAG [SRA]
Identical group No.167778 (1 seq.)
>SRA1049512 SRR035095.88403 454 Sequencing (SRP001816) 549 464 - Leu GAG [SRA]
Identical group No.167781 (1 seq.)
>SRA1049651 SRR035095.111354 454 Sequencing (SRP001816) 411 326 - Leu GAG [SRA]
Identical group No.167784 (1 seq.)
>SRA1050123 SRR035095.195724 454 Sequencing (SRP001816) 259 344 + Leu GAG [SRA]
Identical group No.167794 (1 seq.)
>SRA1050690 SRR035095.327401 454 Sequencing (SRP001816) 230 145 - Leu GAG [SRA]
Identical group No.180261 (7 seq.)
>WENV170603348 FUWD010303991 [FUWD] metagenome; unknown 449 365 - Leu GAG [ENA] ¢þ
>SRA1033075 SRR035088.167342 454 Sequencing (SRP001809) 38 122 + Leu GAG [SRA]
>SRA1036414 SRR035089.515769 454 Sequencing (SRP001810) 189 105 - Leu GAG [SRA]
>SRA1040906 SRR035091.167509 454 Sequencing (SRP001812) 236 320 + Leu GAG [SRA]
>SRA1042242 SRR035091.360941 454 Sequencing (SRP001812) 236 320 + Leu GAG [SRA]
>SRA1042390 SRR035091.381035 454 Sequencing (SRP001812) 235 321 + Leu GAG [SRA]
>SRA1049473 SRR035095.82744 454 Sequencing (SRP001816) 447 363 - Leu GAG [SRA]
Identical group No.198064 (4 seq.)
>W1710986631 LPUF01000001 Gammaproteobacteria Methyloprofundus sedimenti [LPUF] 2096189 2096273 + Leu GAG [ENA] ¡û
>WENV170604460 FUWD010400408 [FUWD] metagenome; unknown 351 435 + Leu GAG [ENA] ¢þ
>SRA1050134 SRR035095.197559 454 Sequencing (SRP001816) 341 257 - Leu GAG [SRA]
>W1710084664 BDMN01000139 Gammaproteobacteria Bathymodiolus platifrons methanotrophic gill symbiont [BDMN] 7816 7732 - Leu GAG [ENA] ¡û
Identical group No.198068 (2 seq.)
>WENV170605144 FUWD010454192 [FUWD] metagenome; unknown 140 224 + Leu GAG [ENA] ¢þ
>SRA1049110 SRR035095.21711 454 Sequencing (SRP001816) 141 225 + Leu GAG [SRA]
Identical group No.198106 (3 seq.)
>WENV170608216 FUWD010903174 [FUWD] metagenome; unknown 201 117 - Leu GAG [ENA] ¢þ
>SRA1048538 SRR035094.196159 454 Sequencing (SRP001815) 211 127 - Leu GAG [SRA]
>SRA1050011 SRR035095.176477 454 Sequencing (SRP001816) 60 144 + Leu GAG [SRA]
Identical group No.198198 (3 seq.)
>WENV170612827 FUWD012697539 [FUWD] metagenome; unknown 148 230 + Leu GAG [ENA] ¢þ
>SRA1044063 SRR035092.217077 454 Sequencing (SRP001813) 284 366 + Leu GAG [SRA]
>SRA1050070 SRR035095.187037 454 Sequencing (SRP001816) 158 240 + Leu GAG [SRA]
Identical group No.198213 (2 seq.)
>WENV170613299 FUWD012794235 [FUWD] metagenome; unknown 178 262 + Leu GAG [ENA] ¢þ
>SRA1050170 SRR035095.204791 454 Sequencing (SRP001816) 124 40 - Leu GAG [SRA]
Identical group No.201113 (1 seq.)
>SRA1050240 SRR035095.219433 454 Sequencing (SRP001816) 161 79 - Leu GAG [SRA]
Identical group No.201114 (1 seq.)
>SRA1050354 SRR035095.242792 454 Sequencing (SRP001816) 90 172 + Leu GAG [SRA]
Identical group No.222834 (3 seq.)
>WENV170607735 FUWD010853178 [FUWD] metagenome; unknown 88 171 + Leu GAG [ENA] ¢þ
>SRA1050142 SRR035095.200187 454 Sequencing (SRP001816) 412 329 - Leu GAG [SRA]
>SRA1050478 SRR035095.270888 454 Sequencing (SRP001816) 98 181 + Leu GAG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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