tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001816)

Anticodon = TCC

HIT: 26 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.72801 (3 seq.)
>WENV170612805 FUWD012692988 [FUWD] metagenome; unknown 251 339 + Gly TCC [ENA] ¢þ
>SRA1035464 SRR035089.310005 454 Sequencing (SRP001810) 144 232 + Gly TCC [SRA]
>SRA1049661 SRR035095.112622 454 Sequencing (SRP001816) 261 349 + Gly TCC [SRA]
Identical group No.237709 (1 seq.)
>SRA1050642 SRR035095.311384 454 Sequencing (SRP001816) 414 492 + Gly TCC [SRA]
Identical group No.272841 (6 seq.)
>WENV170612147 FUWD012512890 [FUWD] metagenome; unknown 261 188 - Gly TCC [ENA] ¢þ
>SRA1032453 SRR035088.13379 454 Sequencing (SRP001809) 261 188 - Gly TCC [SRA]
>SRA1036115 SRR035089.448165 454 Sequencing (SRP001810) 245 172 - Gly TCC [SRA]
>SRA1049677 SRR035095.117333 454 Sequencing (SRP001816) 125 198 + Gly TCC [SRA]
>SRA1049781 SRR035095.137575 454 Sequencing (SRP001816) 42 115 + Gly TCC [SRA]
>W1511564114 LADK01003429 Cyanobacteriota Trichodesmium erythraeum 21-75 [LADK] 968 1042 + Gly TCC [ENA] ¡û
Identical group No.274070 (23 seq.)
>W1711136016 LUZS01000033 Unclassified Cloacimonetes bacterium WWEI_01 [LUZS] 14963 14887 - Gly TCC [ENA] ¡û
>W1711411186 MGSU01000332 Unclassified Deltaproteobacteria bacterium RIFOXYA12_FULL_61_11 [MGSU] 5195 5271 + Gly TCC [ENA] ¡û
>W131162328 AQYP01000060 Unclassified Cloacimonetes bacterium JGI 0000039-G13 WWE1 bacterium JGI 0000039-G13 [AQYP] 2459 2535 + Gly TCC [ENA] ¡û
>W131192591 ASMD01000028 Unclassified Cloacimonetes bacterium JGI 0000039-M09 WWE1 bacterium JGI 0000039-M09 [ASMD] 6169 6093 - Gly TCC [ENA] ¡û
>W1712000843 NDYN01000009 Campylobacterota Campylobacter concisus [NDYN] 31638 31714 + Gly TCC [ENA] ¡û
>WENV180095334 MTBK01063284 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 1967 2043 + Gly TCC [ENA] ¢þ
>WENV181229742 OFEK01000041 [OFEK] activated sludge metagenome; Anaerobic digester 47655 47731 + Gly TCC [ENA] ¢þ
>WENV181311841 OFJB01015739 [OFJB] sludge metagenome; sludge 405 329 - Gly TCC [ENA] ¢þ
>W141139485 AWNP01000071 Unclassified Cloacimonetes bacterium JGI OTU-3 [AWNP] 2459 2535 + Gly TCC [ENA] ¡û
>WENV170560661 CZCA01000002 [CZCA] anaerobic digester metagenome; anaerobic digester 24174 24098 - Gly TCC [ENA] ¢þ
>WENV170971128 MTKX01001865 [MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 33326 33402 + Gly TCC [ENA] ¢þ
>WENV170971643 MTKX01009034 [MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 1617 1541 - Gly TCC [ENA] ¢þ
>WENV170973797 MTKY01051027 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 66459 66383 - Gly TCC [ENA] ¢þ
>WENV170975970 MTKZ01003557 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 1729 1653 - Gly TCC [ENA] ¢þ
>WENV170976696 MTKZ01010935 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 11440 11516 + Gly TCC [ENA] ¢þ
>WENV170977291 MTKZ01020332 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 26386 26310 - Gly TCC [ENA] ¢þ
>W1810148021 PIRD01000009 Campylobacterota Campylobacter concisus P11CDO-S1 [PIRD] 56178 56102 - Gly TCC [ENA] ¡û
>C151097975 CU466930 Unclassified Candidatus Cloacimonas acidaminovorans str. Evry [CU466930] 526856 526780 - Gly TCC - ¡û
>SRA1044908 SRR035092.371292 454 Sequencing (SRP001813) 212 288 + Gly TCC [SRA]
>SRA1049156 SRR035095.29912 454 Sequencing (SRP001816) 172 245 + Gly TCC [SRA]
>SRA1049379 SRR035095.66906 454 Sequencing (SRP001816) 172 245 + Gly TCC [SRA]
>W1610947136 LUZS01000033 Unclassified Cloacimonetes bacterium WWEI_01 [LUZS] 14963 14887 - Gly TCC [ENA] ¡û
>ENV003101 CU466930 Environmental sample from ENV division of INSDC 526857 526779 - Gly TCC [ENA]
Identical group No.372123 (1 seq.)
>SRA1049058 SRR035095.11595 454 Sequencing (SRP001816) 88 12 - Gly TCC [SRA]
Identical group No.453241 (28 seq.)
>W131157822 AQSW01000083 Atribacterota Atribacteria bacterium SCGC AB-164-A22 OP9 bacterium SCGC AB-164-A22 [AQSW] 29381 29456 + Gly TCC [ENA] ¡û
>W1711398135 MEYG01000019 Atribacterota Candidatus Atribacteria bacterium RBG_16_35_8 [MEYG] 4120 4195 + Gly TCC [ENA] ¡û
>WENV170017558 BARU01001111 [BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula 1459 1384 - Gly TCC [ENA] ¢þ
>WENV170018191 BARV01023695 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 497 422 - Gly TCC [ENA] ¢þ
>WENV170601159 FUWD010159189 [FUWD] metagenome; unknown 70 145 + Gly TCC [ENA] ¢þ
>WENV170605150 FUWD010454585 [FUWD] metagenome; unknown 135 210 + Gly TCC [ENA] ¢þ
>WENV170618824 FUWD012988248 [FUWD] metagenome; unknown 427 502 + Gly TCC [ENA] ¢þ
>WENV170626570 FUWD013225773 [FUWD] metagenome; unknown 163 238 + Gly TCC [ENA] ¢þ
>WENV170677257 LDZT01004572 [LDZT] terrestrial metagenome; oil reservoir sample SB1 10044 10119 + Gly TCC [ENA] ¢þ
>WENV170694470 LGVD01064148 [LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at 752 677 - Gly TCC [ENA] ¢þ
>WENV170695166 LGVE01055862 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 419 344 - Gly TCC [ENA] ¢þ
>WENV170697661 LGVF01170491 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 3870 3795 - Gly TCC [ENA] ¢þ
>W1910702392 MEYH01000056 Atribacterota Candidatus Atribacteria bacterium RBG_19FT_COMBO_35_14 [MEYH] 6991 6916 - Gly TCC [ENA] ¡û
>W1910870304 NCRO01000049 Atribacterota Candidatus Atribacteria bacterium RS-JS1 [NCRO] 2757 2832 + Gly TCC [ENA] ¡û
>SRA1019562 SRR035082.476456 454 Sequencing (SRP001803) 308 383 + Gly TCC [SRA]
>SRA1025608 SRR035085.48859 454 Sequencing (SRP001806) 60 135 + Gly TCC [SRA]
>SRA1029227 SRR035087.94717 454 Sequencing (SRP001808) 430 355 - Gly TCC [SRA]
>SRA1029713 SRR035087.169386 454 Sequencing (SRP001808) 260 185 - Gly TCC [SRA]
>SRA1030318 SRR035087.262589 454 Sequencing (SRP001808) 91 166 + Gly TCC [SRA]
>SRA1030607 SRR035087.303901 454 Sequencing (SRP001808) 148 73 - Gly TCC [SRA]
>SRA1030675 SRR035087.312323 454 Sequencing (SRP001808) 360 285 - Gly TCC [SRA]
>SRA1030698 SRR035087.316065 454 Sequencing (SRP001808) 188 113 - Gly TCC [SRA]
>SRA1030994 SRR035087.358336 454 Sequencing (SRP001808) 260 185 - Gly TCC [SRA]
>SRA1034909 SRR035089.196324 454 Sequencing (SRP001810) 70 145 + Gly TCC [SRA]
>SRA1035129 SRR035089.242826 454 Sequencing (SRP001810) 139 214 + Gly TCC [SRA]
>SRA1050629 SRR035095.309692 454 Sequencing (SRP001816) 322 397 + Gly TCC [SRA]
>W1610613585 LGGA01000005 Atribacterota Atribacteria bacterium 34_128 [LGGA] 10044 10119 + Gly TCC [ENA] ¡û
>W1710734757 LGGA01000005 Atribacterota Atribacteria bacterium 34_128 [LGGA] 10044 10119 + Gly TCC [ENA] ¡û
Identical group No.453869 (18 seq.)
>WENV180242455 OBDI01239089 [OBDI] metagenome; diffuse fluid 30 103 + Gly TCC [ENA] ¢þ
>WENV180583450 OCNB01072523 [OCNB] metagenome; diffuse fluid 46 119 + Gly TCC [ENA] ¢þ
>WENV181295178 OFHI01002212 [OFHI] soil metagenome; Clay 977 904 - Gly TCC [ENA] ¢þ
>WENV170535975 CEWP01132079 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 134 61 - Gly TCC [ENA] ¢þ
>WENV170616557 FUWD012891056 [FUWD] metagenome; unknown 260 333 + Gly TCC [ENA] ¢þ
>WENV170617825 FUWD012937803 [FUWD] metagenome; unknown 442 369 - Gly TCC [ENA] ¢þ
>WENV170624421 FUWD013181327 [FUWD] metagenome; unknown 14 87 + Gly TCC [ENA] ¢þ
>WENV170632707 FUWD013386310 [FUWD] metagenome; unknown 14 87 + Gly TCC [ENA] ¢þ
>SRA1032565 SRR035088.47772 454 Sequencing (SRP001809) 197 124 - Gly TCC [SRA]
>SRA1033101 SRR035088.174720 454 Sequencing (SRP001809) 129 56 - Gly TCC [SRA]
>SRA1033104 SRR035088.175050 454 Sequencing (SRP001809) 256 329 + Gly TCC [SRA]
>SRA1036562 SRR035089.549201 454 Sequencing (SRP001810) 156 229 + Gly TCC [SRA]
>SRA1036822 SRR035090.14683 454 Sequencing (SRP001811) 266 339 + Gly TCC [SRA]
>SRA1036852 SRR035090.24995 454 Sequencing (SRP001811) 266 339 + Gly TCC [SRA]
>SRA1037843 SRR035090.203919 454 Sequencing (SRP001811) 174 101 - Gly TCC [SRA]
>SRA1038877 SRR035090.385737 454 Sequencing (SRP001811) 83 10 - Gly TCC [SRA]
>SRA1049544 SRR035095.94392 454 Sequencing (SRP001816) 103 176 + Gly TCC [SRA]
>SRA1054279 SRR035099.99445 454 Sequencing (SRP001820) 24 97 + Gly TCC [SRA]
Identical group No.466447 (16 seq.)
>W1711135751 LUZK01000071 Bacteroidota Bacteroidales bacterium Bact_19 [LUZK] 5085 5160 + Gly TCC [ENA] ¡û
>WENV180086411 MPMD02465759 [MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter 10221 10146 - Gly TCC [ENA] ¢þ
>WENV180092082 MPMF02238690 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 512 437 - Gly TCC [ENA] ¢þ
>WENV180095320 MTBK01062351 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 423 496 + Gly TCC [ENA] ¢þ
>WENV183705825 PDWI01002357 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 15562 15490 - Gly TCC [ENA] ¢þ
>WENV183709954 PDWI01036948 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 747 674 - Gly TCC [ENA] ¢þ
>WENV183710064 PDWI01038941 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 2284 2357 + Gly TCC [ENA] ¢þ
>WENV183714147 PDWI01169983 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 902 829 - Gly TCC [ENA] ¢þ
>WENV183718238 PDWJ01003006 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 6968 6893 - Gly TCC [ENA] ¢þ
>WENV183747006 PPCM01000102 [PPCM] marine sediment metagenome; marine sediment 113724 113651 - Gly TCC [ENA] ¢þ
>WENV183809213 PVBE011366055 [PVBE] marine metagenome; water 27911 27986 + Gly TCC [ENA] ¢þ
>WENV170603404 FUWD010307897 [FUWD] metagenome; unknown 515 440 - Gly TCC [ENA] ¢þ
>C181000027 AP014564 Bacteroidota Ichthyobacterium seriolicida JBKA-6 [AP014564] 158528 158455 - Gly TCC - ¡û
>SRA1049359 SRR035095.63898 454 Sequencing (SRP001816) 459 384 - Gly TCC [SRA]
>SRA1054216 SRR035099.85733 454 Sequencing (SRP001820) 298 373 + Gly TCC [SRA]
>W1610946871 LUZK01000071 Bacteroidota Bacteroidales bacterium Bact_19 [LUZK] 5085 5160 + Gly TCC [ENA] ¡û
Identical group No.547535 (3 seq.)
>WENV170600342 FUWD010120846 [FUWD] metagenome; unknown 220 145 - Gly TCC [ENA] ¢þ
>SRA1049042 SRR035095.5113 454 Sequencing (SRP001816) 56 131 + Gly TCC [SRA]
>SRA1050672 SRR035095.321033 454 Sequencing (SRP001816) 230 155 - Gly TCC [SRA]
Identical group No.547689 (2 seq.)
>WENV170603289 FUWD010298930 [FUWD] metagenome; unknown 226 153 - Gly TCC [ENA] ¢þ
>SRA1049584 SRR035095.98688 454 Sequencing (SRP001816) 421 494 + Gly TCC [SRA]
Identical group No.563082 (1 seq.)
>SRA1049483 SRR035095.84161 454 Sequencing (SRP001816) 366 441 + Gly TCC [SRA]
Identical group No.563091 (1 seq.)
>SRA1049574 SRR035095.97162 454 Sequencing (SRP001816) 335 410 + Gly TCC [SRA]
Identical group No.563138 (1 seq.)
>SRA1050305 SRR035095.234342 454 Sequencing (SRP001816) 143 68 - Gly TCC [SRA]
Identical group No.654428 (13 seq.)
>WENV170220459 CEPZ01169295 [CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 222 149 - Gly TCC [ENA] ¢þ
>WENV170617861 FUWD012940152 [FUWD] metagenome; unknown 607 536 - Gly TCC [ENA] ¢þ
>WENV170617864 FUWD012940153 [FUWD] metagenome; unknown 358 287 - Gly TCC [ENA] ¢þ
>SRA1030581 SRR035087.299819 454 Sequencing (SRP001808) 259 188 - Gly TCC [SRA]
>SRA1034273 SRR035089.44086 454 Sequencing (SRP001810) 18 89 + Gly TCC [SRA]
>SRA1041707 SRR035091.280525 454 Sequencing (SRP001812) 262 333 + Gly TCC [SRA]
>SRA1041846 SRR035091.304041 454 Sequencing (SRP001812) 142 213 + Gly TCC [SRA]
>SRA1043139 SRR035092.56687 454 Sequencing (SRP001813) 186 257 + Gly TCC [SRA]
>SRA1047942 SRR035094.72171 454 Sequencing (SRP001815) 74 145 + Gly TCC [SRA]
>SRA1049048 SRR035095.6838 454 Sequencing (SRP001816) 201 130 - Gly TCC [SRA]
>SRA1049072 SRR035095.14260 454 Sequencing (SRP001816) 202 131 - Gly TCC [SRA]
>SRA1049496 SRR035095.86638 454 Sequencing (SRP001816) 89 160 + Gly TCC [SRA]
>SRA1050082 SRR035095.188450 454 Sequencing (SRP001816) 354 283 - Gly TCC [SRA]
Identical group No.711182 (3 seq.)
>WENV170613232 FUWD012791272 [FUWD] metagenome; unknown 254 326 + Gly TCC [ENA] ¢þ
>SRA1043765 SRR035092.171700 454 Sequencing (SRP001813) 316 388 + Gly TCC [SRA]
>SRA1049810 SRR035095.141547 454 Sequencing (SRP001816) 275 347 + Gly TCC [SRA]
Identical group No.711333 (6 seq.)
>WENV170621157 FUWD013050591 [FUWD] metagenome; unknown 1936 2010 + Gly TCC [ENA] ¢þ
>WENV170629325 FUWD013267224 [FUWD] metagenome; unknown 1936 2010 + Gly TCC [ENA] ¢þ
>SRA1042622 SRR035091.417939 454 Sequencing (SRP001812) 5 79 + Gly TCC [SRA]
>SRA1042847 SRR035091.454813 454 Sequencing (SRP001812) 257 331 + Gly TCC [SRA]
>SRA1042917 SRR035091.467014 454 Sequencing (SRP001812) 5 79 + Gly TCC [SRA]
>SRA1050186 SRR035095.208131 454 Sequencing (SRP001816) 286 361 + Gly TCC [SRA]
Identical group No.711512 (9 seq.)
>WENV170624725 FUWD013185782 [FUWD] metagenome; unknown 1300 1226 - Gly TCC [ENA] ¢þ
>WENV170633005 FUWD013389958 [FUWD] metagenome; unknown 1300 1226 - Gly TCC [ENA] ¢þ
>SRA1019613 SRR035082.488580 454 Sequencing (SRP001803) 115 41 - Gly TCC [SRA]
>SRA1041842 SRR035091.303604 454 Sequencing (SRP001812) 201 275 + Gly TCC [SRA]
>SRA1042765 SRR035091.443561 454 Sequencing (SRP001812) 292 366 + Gly TCC [SRA]
>SRA1043035 SRR035092.26720 454 Sequencing (SRP001813) 179 253 + Gly TCC [SRA]
>SRA1043828 SRR035092.181212 454 Sequencing (SRP001813) 327 253 - Gly TCC [SRA]
>SRA1044455 SRR035092.282870 454 Sequencing (SRP001813) 372 444 + Gly TCC [SRA]
>SRA1049847 SRR035095.147196 454 Sequencing (SRP001816) 173 247 + Gly TCC [SRA]
Identical group No.720392 (3 seq.)
>WENV170695652 LGVE01144092 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 136 208 + Gly TCC [ENA] ¢þ
>WENV170697691 LGVF01174482 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 182 110 - Gly TCC [ENA] ¢þ
>SRA1049119 SRR035095.23125 454 Sequencing (SRP001816) 308 236 - Gly TCC [SRA]
Identical group No.720461 (2 seq.)
>SRA1040085 SRR035091.36022 454 Sequencing (SRP001812) 168 242 + Gly TCC [SRA]
>SRA1050632 SRR035095.310019 454 Sequencing (SRP001816) 149 223 + Gly TCC [SRA]
Identical group No.720462 (1 seq.)
>SRA1050662 SRR035095.317123 454 Sequencing (SRP001816) 216 141 - Gly TCC [SRA]
Identical group No.788215 (6 seq.)
>WENV170600335 FUWD010120708 [FUWD] metagenome; unknown 601 531 - Gly TCC [ENA] ¢þ
>WENV170618350 FUWD012964382 [FUWD] metagenome; unknown 779 852 + Gly TCC [ENA] ¢þ
>WENV170618351 FUWD012964383 [FUWD] metagenome; unknown 86 156 + Gly TCC [ENA] ¢þ
>SRA1032059 SRR035087.541521 454 Sequencing (SRP001808) 322 252 - Gly TCC [SRA]
>SRA1032506 SRR035088.30591 454 Sequencing (SRP001809) 108 178 + Gly TCC [SRA]
>SRA1049571 SRR035095.96986 454 Sequencing (SRP001816) 147 74 - Gly TCC [SRA]
Identical group No.805298 (2 seq.)
>WENV170612831 FUWD012698093 [FUWD] metagenome; unknown 335 263 - Gly TCC [ENA] ¢þ
>SRA1050132 SRR035095.197128 454 Sequencing (SRP001816) 346 274 - Gly TCC [SRA]
Identical group No.809591 (1 seq.)
>SRA1049904 SRR035095.157628 454 Sequencing (SRP001816) 438 511 + Gly TCC [SRA]
Identical group No.809600 (1 seq.)
>SRA1050188 SRR035095.208742 454 Sequencing (SRP001816) 335 265 - Gly TCC [SRA]
Identical group No.809602 (1 seq.)
>SRA1050349 SRR035095.241991 454 Sequencing (SRP001816) 294 222 - Gly TCC [SRA]
Identical group No.809608 (1 seq.)
>SRA1050650 SRR035095.313318 454 Sequencing (SRP001816) 42 113 + Gly TCC [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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