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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
454 Sequencing (SRP001816)
Anticodon = TGG
HIT:
42 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.240906 (8 seq.)
>WENV170612211
FUWD012536123
[FUWD] metagenome; unknown
183
108
-
Pro
TGG
[ENA]
¢þ
>WENV170612362
FUWD012588442
[FUWD] metagenome; unknown
103
28
-
Pro
TGG
[ENA]
¢þ
>SRA1031886
SRR035087.504680
454 Sequencing (SRP001808)
189
112
-
Pro
TGG
[SRA]
>SRA1033728
SRR035088.338024
454 Sequencing (SRP001809)
183
108
-
Pro
TGG
[SRA]
>SRA1033894
SRR035088.397919
454 Sequencing (SRP001809)
1
76
+
Pro
TGG
[SRA]
>SRA1035727
SRR035089.363211
454 Sequencing (SRP001810)
512
435
-
Pro
TGG
[SRA]
>SRA1037609
SRR035090.163062
454 Sequencing (SRP001811)
215
140
-
Pro
TGG
[SRA]
>SRA1050687
SRR035095.326864
454 Sequencing (SRP001816)
84
159
+
Pro
TGG
[SRA]
Identical group No.240932 (8 seq.)
>WENV170625729
FUWD013204273
[FUWD] metagenome; unknown
267
342
+
Pro
TGG
[ENA]
¢þ
>WENV170633951
FUWD013406212
[FUWD] metagenome; unknown
267
342
+
Pro
TGG
[ENA]
¢þ
>SRA1033826
SRR035088.367150
454 Sequencing (SRP001809)
208
133
-
Pro
TGG
[SRA]
>SRA1036411
SRR035089.514858
454 Sequencing (SRP001810)
183
108
-
Pro
TGG
[SRA]
>SRA1041097
SRR035091.195597
454 Sequencing (SRP001812)
181
106
-
Pro
TGG
[SRA]
>SRA1050171
SRR035095.205761
454 Sequencing (SRP001816)
318
243
-
Pro
TGG
[SRA]
>SRA1050189
SRR035095.209271
454 Sequencing (SRP001816)
318
243
-
Pro
TGG
[SRA]
>SRA1050589
SRR035095.297681
454 Sequencing (SRP001816)
174
99
-
Pro
TGG
[SRA]
Identical group No.244495 (3 seq.)
>WENV170612049
FUWD012490414
[FUWD] metagenome; unknown
231
154
-
Pro
TGG
[ENA]
¢þ
>SRA1030625
SRR035087.306218
454 Sequencing (SRP001808)
271
194
-
Pro
TGG
[SRA]
>SRA1050575
SRR035095.295622
454 Sequencing (SRP001816)
130
207
+
Pro
TGG
[SRA]
Identical group No.244607 (8 seq.)
>WENV170605168
FUWD010455742
[FUWD] metagenome; unknown
423
349
-
Pro
TGG
[ENA]
¢þ
>SRA1029801
SRR035087.183837
454 Sequencing (SRP001808)
293
219
-
Pro
TGG
[SRA]
>SRA1037301
SRR035090.109860
454 Sequencing (SRP001811)
423
349
-
Pro
TGG
[SRA]
>SRA1037591
SRR035090.159922
454 Sequencing (SRP001811)
424
350
-
Pro
TGG
[SRA]
>SRA1044420
SRR035092.277025
454 Sequencing (SRP001813)
106
32
-
Pro
TGG
[SRA]
>SRA1049135
SRR035095.26451
454 Sequencing (SRP001816)
369
443
+
Pro
TGG
[SRA]
>SRA1049213
SRR035095.38831
454 Sequencing (SRP001816)
369
443
+
Pro
TGG
[SRA]
>SRA1049666
SRR035095.113710
454 Sequencing (SRP001816)
369
443
+
Pro
TGG
[SRA]
Identical group No.254015 (4 seq.)
>WENV170605140
FUWD010453579
[FUWD] metagenome; unknown
234
159
-
Pro
TGG
[ENA]
¢þ
>SRA1034044
SRR035088.464127
454 Sequencing (SRP001809)
83
8
-
Pro
TGG
[SRA]
>SRA1041192
SRR035091.211634
454 Sequencing (SRP001812)
426
351
-
Pro
TGG
[SRA]
>SRA1049064
SRR035095.13429
454 Sequencing (SRP001816)
253
178
-
Pro
TGG
[SRA]
Identical group No.254155 (6 seq.)
>WENV170612440
FUWD012612234
[FUWD] metagenome; unknown
166
89
-
Pro
TGG
[ENA]
¢þ
>SRA1019687
SRR035082.502864
454 Sequencing (SRP001803)
208
285
+
Pro
TGG
[SRA]
>SRA1032520
SRR035088.37211
454 Sequencing (SRP001809)
144
221
+
Pro
TGG
[SRA]
>SRA1040801
SRR035091.151522
454 Sequencing (SRP001812)
166
89
-
Pro
TGG
[SRA]
>SRA1041663
SRR035091.276297
454 Sequencing (SRP001812)
57
134
+
Pro
TGG
[SRA]
>SRA1050492
SRR035095.275299
454 Sequencing (SRP001816)
154
77
-
Pro
TGG
[SRA]
Identical group No.254167 (4 seq.)
>WENV170612803
FUWD012692890
[FUWD] metagenome; unknown
256
333
+
Pro
TGG
[ENA]
¢þ
>SRA1033795
SRR035088.358173
454 Sequencing (SRP001809)
114
191
+
Pro
TGG
[SRA]
>SRA1033854
SRR035088.378394
454 Sequencing (SRP001809)
371
296
-
Pro
TGG
[SRA]
>SRA1049653
SRR035095.111428
454 Sequencing (SRP001816)
267
344
+
Pro
TGG
[SRA]
Identical group No.254257 (11 seq.)
>WENV170624724
FUWD013185782
[FUWD] metagenome; unknown
1382
1305
-
Pro
TGG
[ENA]
¢þ
>WENV170633004
FUWD013389958
[FUWD] metagenome; unknown
1382
1305
-
Pro
TGG
[ENA]
¢þ
>SRA1017041
SRR035082.71384
454 Sequencing (SRP001803)
246
323
+
Pro
TGG
[SRA]
>SRA1040109
SRR035091.40754
454 Sequencing (SRP001812)
138
61
-
Pro
TGG
[SRA]
>SRA1041841
SRR035091.303604
454 Sequencing (SRP001812)
119
196
+
Pro
TGG
[SRA]
>SRA1042764
SRR035091.443561
454 Sequencing (SRP001812)
210
287
+
Pro
TGG
[SRA]
>SRA1042843
SRR035091.454283
454 Sequencing (SRP001812)
124
47
-
Pro
TGG
[SRA]
>SRA1043192
SRR035092.67596
454 Sequencing (SRP001813)
89
12
-
Pro
TGG
[SRA]
>SRA1043827
SRR035092.181212
454 Sequencing (SRP001813)
409
332
-
Pro
TGG
[SRA]
>SRA1044454
SRR035092.282870
454 Sequencing (SRP001813)
290
367
+
Pro
TGG
[SRA]
>SRA1049846
SRR035095.147196
454 Sequencing (SRP001816)
91
168
+
Pro
TGG
[SRA]
Identical group No.255653 (9 seq.)
>WENV183704381
PDWI01000197
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
32269
32194
-
Pro
TGG
[ENA]
¢þ
>WENV183710153
PDWI01040562
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
2147
2072
-
Pro
TGG
[ENA]
¢þ
>WENV183713396
PDWI01136692
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
1466
1541
+
Pro
TGG
[ENA]
¢þ
>WENV183714399
PDWI01181967
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
1330
1255
-
Pro
TGG
[ENA]
¢þ
>WENV183718724
PDWJ01006087
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
7535
7460
-
Pro
TGG
[ENA]
¢þ
>WENV183719748
PDWJ01019753
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
2194
2269
+
Pro
TGG
[ENA]
¢þ
>WENV183719832
PDWJ01021234
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
904
829
-
Pro
TGG
[ENA]
¢þ
>WENV183720812
PDWJ01046133
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
3392
3467
+
Pro
TGG
[ENA]
¢þ
>SRA1050383
SRR035095.249764
454 Sequencing (SRP001816)
151
228
+
Pro
TGG
[SRA]
Identical group No.256300 (1 seq.)
>SRA1049074
SRR035095.14680
454 Sequencing (SRP001816)
268
191
-
Pro
TGG
[SRA]
Identical group No.256311 (1 seq.)
>SRA1049410
SRR035095.73377
454 Sequencing (SRP001816)
292
215
-
Pro
TGG
[SRA]
Identical group No.256312 (1 seq.)
>SRA1049414
SRR035095.74195
454 Sequencing (SRP001816)
60
137
+
Pro
TGG
[SRA]
Identical group No.256318 (1 seq.)
>SRA1049838
SRR035095.145948
454 Sequencing (SRP001816)
56
133
+
Pro
TGG
[SRA]
Identical group No.256320 (2 seq.)
>WENV181224867
OFDG01012180
[OFDG] metagenome; hydrothermal vent
238
315
+
Pro
TGG
[ENA]
¢þ
>SRA1049996
SRR035095.173836
454 Sequencing (SRP001816)
91
168
+
Pro
TGG
[SRA]
Identical group No.256322 (2 seq.)
>SRA1050020
SRR035095.178078
454 Sequencing (SRP001816)
175
100
-
Pro
TGG
[SRA]
>SRA1050319
SRR035095.236600
454 Sequencing (SRP001816)
318
243
-
Pro
TGG
[SRA]
Identical group No.256336 (1 seq.)
>SRA1050477
SRR035095.270789
454 Sequencing (SRP001816)
116
39
-
Pro
TGG
[SRA]
Identical group No.256337 (1 seq.)
>SRA1050628
SRR035095.309692
454 Sequencing (SRP001816)
243
318
+
Pro
TGG
[SRA]
Identical group No.272245 (19 seq.)
>WENV180277032
OBHV01036933
[OBHV] metagenome; water
201
125
-
Pro
TGG
[ENA]
¢þ
>WENV180295808
OBIZ01340170
[OBIZ] soil metagenome; soil
221
145
-
Pro
TGG
[ENA]
¢þ
>WENV180346353
OBLN01070297
[OBLN] sediment metagenome; sediment
186
110
-
Pro
TGG
[ENA]
¢þ
>WENV170625524
FUWD013199802
[FUWD] metagenome; unknown
2020
2096
+
Pro
TGG
[ENA]
¢þ
>WENV170633753
FUWD013402140
[FUWD] metagenome; unknown
2020
2096
+
Pro
TGG
[ENA]
¢þ
>SRA1025496
SRR035085.25262
454 Sequencing (SRP001806)
322
398
+
Pro
TGG
[SRA]
>SRA1025525
SRR035085.33666
454 Sequencing (SRP001806)
322
398
+
Pro
TGG
[SRA]
>SRA1025619
SRR035085.51320
454 Sequencing (SRP001806)
322
398
+
Pro
TGG
[SRA]
>SRA1025872
SRR035085.99094
454 Sequencing (SRP001806)
322
398
+
Pro
TGG
[SRA]
>SRA1026171
SRR035085.157646
454 Sequencing (SRP001806)
322
398
+
Pro
TGG
[SRA]
>SRA1032484
SRR035088.23565
454 Sequencing (SRP001809)
83
7
-
Pro
TGG
[SRA]
>SRA1032947
SRR035088.137162
454 Sequencing (SRP001809)
82
158
+
Pro
TGG
[SRA]
>SRA1033659
SRR035088.315904
454 Sequencing (SRP001809)
307
231
-
Pro
TGG
[SRA]
>SRA1033780
SRR035088.352291
454 Sequencing (SRP001809)
235
311
+
Pro
TGG
[SRA]
>SRA1033818
SRR035088.364574
454 Sequencing (SRP001809)
175
251
+
Pro
TGG
[SRA]
>SRA1034361
SRR035089.68828
454 Sequencing (SRP001810)
81
157
+
Pro
TGG
[SRA]
>SRA1048341
SRR035094.150914
454 Sequencing (SRP001815)
285
361
+
Pro
TGG
[SRA]
>SRA1049271
SRR035095.48395
454 Sequencing (SRP001816)
213
289
+
Pro
TGG
[SRA]
>SRA1050151
SRR035095.201277
454 Sequencing (SRP001816)
88
164
+
Pro
TGG
[SRA]
Identical group No.272545 (14 seq.)
>WENV170624694
FUWD013185186
[FUWD] metagenome; unknown
1830
1754
-
Pro
TGG
[ENA]
¢þ
>WENV170625022
FUWD013190280
[FUWD] metagenome; unknown
3743
3667
-
Pro
TGG
[ENA]
¢þ
>WENV170632975
FUWD013389453
[FUWD] metagenome; unknown
1830
1754
-
Pro
TGG
[ENA]
¢þ
>WENV170633278
FUWD013393744
[FUWD] metagenome; unknown
3743
3667
-
Pro
TGG
[ENA]
¢þ
>SRA1017063
SRR035082.74365
454 Sequencing (SRP001803)
131
55
-
Pro
TGG
[SRA]
>SRA1030033
SRR035087.218798
454 Sequencing (SRP001808)
179
103
-
Pro
TGG
[SRA]
>SRA1030605
SRR035087.303735
454 Sequencing (SRP001808)
108
32
-
Pro
TGG
[SRA]
>SRA1032402
SRR035087.622681
454 Sequencing (SRP001808)
293
369
+
Pro
TGG
[SRA]
>SRA1034375
SRR035089.72399
454 Sequencing (SRP001810)
240
164
-
Pro
TGG
[SRA]
>SRA1034547
SRR035089.118880
454 Sequencing (SRP001810)
150
74
-
Pro
TGG
[SRA]
>SRA1047918
SRR035094.67558
454 Sequencing (SRP001815)
152
76
-
Pro
TGG
[SRA]
>SRA1047958
SRR035094.75880
454 Sequencing (SRP001815)
152
76
-
Pro
TGG
[SRA]
>SRA1048842
SRR035094.261627
454 Sequencing (SRP001815)
245
321
+
Pro
TGG
[SRA]
>SRA1050033
SRR035095.179483
454 Sequencing (SRP001816)
92
168
+
Pro
TGG
[SRA]
Identical group No.272720 (5 seq.)
>WENV170626786
FUWD013229466
[FUWD] metagenome; unknown
9056
8982
-
Pro
TGG
[ENA]
¢þ
>SRA1035317
SRR035089.282988
454 Sequencing (SRP001810)
297
371
+
Pro
TGG
[SRA]
>SRA1040706
SRR035091.135307
454 Sequencing (SRP001812)
102
28
-
Pro
TGG
[SRA]
>SRA1043327
SRR035092.97490
454 Sequencing (SRP001813)
49
123
+
Pro
TGG
[SRA]
>SRA1049572
SRR035095.97162
454 Sequencing (SRP001816)
176
250
+
Pro
TGG
[SRA]
Identical group No.272724 (14 seq.)
>WENV180317972
OBKL01016563
[OBKL] soil metagenome; Alaskan Permafrost
153
229
+
Pro
TGG
[ENA]
¢þ
>WENV183675065
ORJL011466307
[ORJL] groundwater metagenome; groundwater
90
166
+
Pro
TGG
[ENA]
¢þ
>WENV183683588
ORMF010594408
[ORMF] groundwater metagenome; groundwater
749
673
-
Pro
TGG
[ENA]
¢þ
>WENV170624252
FUWD013178491
[FUWD] metagenome; unknown
1922
1846
-
Pro
TGG
[ENA]
¢þ
>WENV170632530
FUWD013384019
[FUWD] metagenome; unknown
1922
1846
-
Pro
TGG
[ENA]
¢þ
>SRA1035356
SRR035089.289635
454 Sequencing (SRP001810)
325
249
-
Pro
TGG
[SRA]
>SRA1048043
SRR035094.96969
454 Sequencing (SRP001815)
339
263
-
Pro
TGG
[SRA]
>SRA1048430
SRR035094.172151
454 Sequencing (SRP001815)
266
190
-
Pro
TGG
[SRA]
>SRA1050087
SRR035095.189496
454 Sequencing (SRP001816)
241
319
+
Pro
TGG
[SRA]
>SRA1050296
SRR035095.233402
454 Sequencing (SRP001816)
242
318
+
Pro
TGG
[SRA]
>SRA1050372
SRR035095.246457
454 Sequencing (SRP001816)
395
319
-
Pro
TGG
[SRA]
>SRA1050387
SRR035095.250410
454 Sequencing (SRP001816)
56
132
+
Pro
TGG
[SRA]
>ENV000729
AJ937768
Environmental sample from ENV division of INSDC
37119
37197
+
Pro
TGG
[ENA]
>W1710545721
FOBS01000026
Thermodesulfobacteriota
Syntrophus gentianae [FOBS]
43143
43219
+
Pro
TGG
[ENA]
¡û
Identical group No.300730 (15 seq.)
>WENV180000911
FLNW01000412
[FLNW] bioreactor metagenome; Moose rumen
1271
1346
+
Pro
TGG
[ENA]
¢þ
>WENV183709045
PDWI01023130
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
5034
4959
-
Pro
TGG
[ENA]
¢þ
>WENV183709652
PDWI01031724
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
2888
2815
-
Pro
TGG
[ENA]
¢þ
>WENV183713573
PDWI01143171
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
215
290
+
Pro
TGG
[ENA]
¢þ
>WENV183714095
PDWI01167882
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
1414
1489
+
Pro
TGG
[ENA]
¢þ
>WENV183714440
PDWI01184139
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
1379
1304
-
Pro
TGG
[ENA]
¢þ
>WENV183714450
PDWI01184470
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
78
3
-
Pro
TGG
[ENA]
¢þ
>WENV183715273
PDWI01230646
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
577
502
-
Pro
TGG
[ENA]
¢þ
>WENV183716222
PDWI01295191
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
921
996
+
Pro
TGG
[ENA]
¢þ
>WENV183721192
PDWJ01058479
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
49
124
+
Pro
TGG
[ENA]
¢þ
>WENV170608157
FUWD010896999
[FUWD] metagenome; unknown
301
226
-
Pro
TGG
[ENA]
¢þ
>WENV170775037
LXOW01003352
[LXOW] bovine gut metagenome; Cow rumen
214
289
+
Pro
TGG
[ENA]
¢þ
>SRA1031724
SRR035087.477576
454 Sequencing (SRP001808)
183
108
-
Pro
TGG
[SRA]
>SRA1042545
SRR035091.405775
454 Sequencing (SRP001812)
292
217
-
Pro
TGG
[SRA]
>SRA1050117
SRR035095.195056
454 Sequencing (SRP001816)
169
244
+
Pro
TGG
[SRA]
Identical group No.357791 (2 seq.)
>WENV170605056
FUWD010445005
[FUWD] metagenome; unknown
397
473
+
Pro
TGG
[ENA]
¢þ
>SRA1050077
SRR035095.187758
454 Sequencing (SRP001816)
259
183
-
Pro
TGG
[SRA]
Identical group No.357800 (4 seq.)
>WENV170605200
FUWD010457581
[FUWD] metagenome; unknown
254
330
+
Pro
TGG
[ENA]
¢þ
>SRA1040973
SRR035091.176415
454 Sequencing (SRP001812)
114
38
-
Pro
TGG
[SRA]
>SRA1042955
SRR035091.473404
454 Sequencing (SRP001812)
202
278
+
Pro
TGG
[SRA]
>SRA1049987
SRR035095.172097
454 Sequencing (SRP001816)
263
339
+
Pro
TGG
[SRA]
Identical group No.358352 (5 seq.)
>WENV170612445
FUWD012612484
[FUWD] metagenome; unknown
62
138
+
Pro
TGG
[ENA]
¢þ
>SRA1040821
SRR035091.154132
454 Sequencing (SRP001812)
62
138
+
Pro
TGG
[SRA]
>SRA1042804
SRR035091.449601
454 Sequencing (SRP001812)
62
138
+
Pro
TGG
[SRA]
>SRA1049817
SRR035095.142024
454 Sequencing (SRP001816)
168
92
-
Pro
TGG
[SRA]
>SRA1050215
SRR035095.214133
454 Sequencing (SRP001816)
168
92
-
Pro
TGG
[SRA]
Identical group No.358403 (3 seq.)
>WENV170612809
FUWD012693687
[FUWD] metagenome; unknown
363
289
-
Pro
TGG
[ENA]
¢þ
>SRA1049709
SRR035095.122799
454 Sequencing (SRP001816)
419
345
-
Pro
TGG
[SRA]
>SRA1050712
SRR035095.335730
454 Sequencing (SRP001816)
374
300
-
Pro
TGG
[SRA]
Identical group No.358473 (2 seq.)
>WENV170613372
FUWD012800238
[FUWD] metagenome; unknown
56
130
+
Pro
TGG
[ENA]
¢þ
>SRA1049136
SRR035095.26787
454 Sequencing (SRP001816)
235
161
-
Pro
TGG
[SRA]
Identical group No.372130 (1 seq.)
>SRA1049218
SRR035095.39743
454 Sequencing (SRP001816)
591
515
-
Pro
TGG
[SRA]
Identical group No.372152 (1 seq.)
>SRA1049482
SRR035095.84161
454 Sequencing (SRP001816)
280
356
+
Pro
TGG
[SRA]
Identical group No.372184 (1 seq.)
>SRA1049867
SRR035095.150073
454 Sequencing (SRP001816)
30
107
+
Pro
TGG
[SRA]
Identical group No.372185 (1 seq.)
>SRA1049893
SRR035095.155622
454 Sequencing (SRP001816)
279
355
+
Pro
TGG
[SRA]
Identical group No.372205 (1 seq.)
>SRA1050145
SRR035095.200228
454 Sequencing (SRP001816)
40
114
+
Pro
TGG
[SRA]
Identical group No.372212 (1 seq.)
>SRA1050287
SRR035095.231406
454 Sequencing (SRP001816)
250
326
+
Pro
TGG
[SRA]
Identical group No.453483 (130 seq.)
>W1711136069
LUZT01000006
Chlorobiota
Chlorobiales bacterium Clorobi_01 [LUZT]
642973
643048
+
Pro
TGG
[ENA]
¡û
>W1711167321
LVWG01000033
Chlorobiota
Pelodictyon luteolum [LVWG]
121193
121266
+
Pro
TGG
[ENA]
¡û
>C171049466
CP016432
Chlorobiota
Prosthecochloris sp. CIB 2401 [CP016432]
1481968
1481895
-
Pro
TGG
-
¡û
>C171060581
CP017305
Chlorobiota
Chlorobaculum limnaeum DSM 1677 [CP017305]
1686934
1686859
-
Pro
TGG
-
¡û
>C171114016
CP020873
Chlorobiota
Prosthecochloris sp. HL-130-GSB [CP020873]
1507461
1507388
-
Pro
TGG
-
¡û
>C007014
AE006470
Chlorobiota
Chlorobaculum tepidum TLS [AE006470]
710320
710395
+
Pro
TGG
[Ensembl]
¡û
>C016737
CP000096
Chlorobiota
Pelodictyon luteolum DSM 273 [CP000096]
826324
826396
+
Pro
TGG
[Ensembl]
¡û
>C018264
CP000607
Chlorobiota
Chlorobium phaeovibrioides [CP000607]
1257036
1256964
-
Pro
TGG
[Ensembl]
¡û
>w007155
AAIJ01000005
Chlorobiota
Prosthecochloris aestuarii DSM 271 [AAIJ]
80638
80713
+
Pro
TGG
[ENA]
¡û
>w006967
AAIC01000035
Chlorobiota
Chlorobium phaeobacteroides BS1 [AAIC]
157
85
-
Pro
TGG
[ENA]
¡û
>WENV181237133
OFFA01158124
[OFFA] coral metagenome; NA
594
521
-
Pro
TGG
[ENA]
¢þ
>C08003655
CP001101
Chlorobiota
Chlorobium phaeobacteroides [CP001101]
1762870
1762795
-
Pro
TGG
[Ensembl]
¡û
>C08003582
CP001099
Chlorobiota
Chlorobaculum parvum NCIB 8327 [CP001099]
746863
746938
+
Pro
TGG
[Ensembl]
¡û
>C08007156
CP001108
Chlorobiota
Prosthecochloris aestuarii DSM 271 [CP001108]
894748
894821
+
Pro
TGG
[Ensembl]
¡û
>WENV183513447
OMKS01005044
[OMKS] sediment metagenome; hot spring sediment
8392
8465
+
Pro
TGG
[ENA]
¢þ
>WENV170613654
FUWD012815686
[FUWD] metagenome; unknown
5748
5821
+
Pro
TGG
[ENA]
¢þ
>WENV170613742
FUWD012818036
[FUWD] metagenome; unknown
1983
2056
+
Pro
TGG
[ENA]
¢þ
>WENV170625541
FUWD013200087
[FUWD] metagenome; unknown
2123
2198
+
Pro
TGG
[ENA]
¢þ
>WENV170633768
FUWD013402406
[FUWD] metagenome; unknown
2123
2198
+
Pro
TGG
[ENA]
¢þ
>C181068791
CP022571
Chlorobiota
Prosthecochloris sp. GSB1 TY Vent [CP022571]
1533968
1533895
-
Pro
TGG
-
¡û
>W09103353
AAJD01000007
Chlorobiota
Chlorobium phaeovibrioides DSM 265 [AAJD]
86761
86834
+
Pro
TGG
[ENA]
¡û
>W1810062190
PDNX01000007
Chlorobiota
Prosthecochloris sp. ZM [PDNX]
1637696
1637623
-
Pro
TGG
[ENA]
¡û
>W1810062234
PDNY01000023
Chlorobiota
Prosthecochloris sp. ZM_2 [PDNY]
5649
5576
-
Pro
TGG
[ENA]
¡û
>W1810062276
PDNZ01000005
Chlorobiota
Prosthecochloris marina V1 [PDNZ]
49372
49445
+
Pro
TGG
[ENA]
¡û
>SRA1019852
SRR035083.4731
454 Sequencing (SRP001804)
65
138
+
Pro
TGG
[SRA]
>SRA1020071
SRR035083.53112
454 Sequencing (SRP001804)
63
136
+
Pro
TGG
[SRA]
>SRA1020166
SRR035083.65428
454 Sequencing (SRP001804)
296
369
+
Pro
TGG
[SRA]
>SRA1020174
SRR035083.67194
454 Sequencing (SRP001804)
208
135
-
Pro
TGG
[SRA]
>SRA1020214
SRR035083.75399
454 Sequencing (SRP001804)
250
323
+
Pro
TGG
[SRA]
>SRA1020237
SRR035083.79926
454 Sequencing (SRP001804)
363
290
-
Pro
TGG
[SRA]
>SRA1020257
SRR035083.84605
454 Sequencing (SRP001804)
63
136
+
Pro
TGG
[SRA]
>SRA1020309
SRR035083.95481
454 Sequencing (SRP001804)
172
99
-
Pro
TGG
[SRA]
>SRA1020372
SRR035083.103527
454 Sequencing (SRP001804)
296
369
+
Pro
TGG
[SRA]
>SRA1020418
SRR035083.111947
454 Sequencing (SRP001804)
109
36
-
Pro
TGG
[SRA]
>SRA1020639
SRR035083.145475
454 Sequencing (SRP001804)
411
338
-
Pro
TGG
[SRA]
>SRA1020756
SRR035083.160115
454 Sequencing (SRP001804)
303
230
-
Pro
TGG
[SRA]
>SRA1020798
SRR035083.166747
454 Sequencing (SRP001804)
409
336
-
Pro
TGG
[SRA]
>SRA1020849
SRR035083.172929
454 Sequencing (SRP001804)
449
522
+
Pro
TGG
[SRA]
>SRA1020920
SRR035083.185445
454 Sequencing (SRP001804)
341
414
+
Pro
TGG
[SRA]
>SRA1020948
SRR035083.189354
454 Sequencing (SRP001804)
256
183
-
Pro
TGG
[SRA]
>SRA1021006
SRR035083.196753
454 Sequencing (SRP001804)
243
316
+
Pro
TGG
[SRA]
>SRA1021183
SRR035083.220878
454 Sequencing (SRP001804)
307
380
+
Pro
TGG
[SRA]
>SRA1021203
SRR035083.223320
454 Sequencing (SRP001804)
315
242
-
Pro
TGG
[SRA]
>SRA1021213
SRR035083.224815
454 Sequencing (SRP001804)
111
184
+
Pro
TGG
[SRA]
>SRA1021229
SRR035083.227212
454 Sequencing (SRP001804)
297
370
+
Pro
TGG
[SRA]
>SRA1021257
SRR035083.231363
454 Sequencing (SRP001804)
256
183
-
Pro
TGG
[SRA]
>SRA1021413
SRR035083.255730
454 Sequencing (SRP001804)
377
450
+
Pro
TGG
[SRA]
>SRA1021429
SRR035083.257178
454 Sequencing (SRP001804)
427
500
+
Pro
TGG
[SRA]
>SRA1021581
SRR035083.276338
454 Sequencing (SRP001804)
271
198
-
Pro
TGG
[SRA]
>SRA1021622
SRR035083.283469
454 Sequencing (SRP001804)
361
288
-
Pro
TGG
[SRA]
>SRA1021697
SRR035083.293966
454 Sequencing (SRP001804)
60
133
+
Pro
TGG
[SRA]
>SRA1021707
SRR035083.296280
454 Sequencing (SRP001804)
26
99
+
Pro
TGG
[SRA]
>SRA1021720
SRR035083.297405
454 Sequencing (SRP001804)
361
288
-
Pro
TGG
[SRA]
>SRA1021898
SRR035083.326255
454 Sequencing (SRP001804)
334
407
+
Pro
TGG
[SRA]
>SRA1022020
SRR035083.340067
454 Sequencing (SRP001804)
83
156
+
Pro
TGG
[SRA]
>SRA1022023
SRR035083.340144
454 Sequencing (SRP001804)
186
113
-
Pro
TGG
[SRA]
>SRA1022145
SRR035083.359528
454 Sequencing (SRP001804)
308
235
-
Pro
TGG
[SRA]
>SRA1022162
SRR035083.361290
454 Sequencing (SRP001804)
254
181
-
Pro
TGG
[SRA]
>SRA1022245
SRR035083.374002
454 Sequencing (SRP001804)
428
501
+
Pro
TGG
[SRA]
>SRA1022322
SRR035083.389454
454 Sequencing (SRP001804)
271
198
-
Pro
TGG
[SRA]
>SRA1022382
SRR035083.398526
454 Sequencing (SRP001804)
294
367
+
Pro
TGG
[SRA]
>SRA1022438
SRR035083.405859
454 Sequencing (SRP001804)
5
78
+
Pro
TGG
[SRA]
>SRA1022479
SRR035083.411851
454 Sequencing (SRP001804)
254
181
-
Pro
TGG
[SRA]
>SRA1022666
SRR035083.439576
454 Sequencing (SRP001804)
352
279
-
Pro
TGG
[SRA]
>SRA1022692
SRR035083.443146
454 Sequencing (SRP001804)
299
372
+
Pro
TGG
[SRA]
>SRA1022696
SRR035083.443370
454 Sequencing (SRP001804)
380
453
+
Pro
TGG
[SRA]
>SRA1022799
SRR035083.462411
454 Sequencing (SRP001804)
209
282
+
Pro
TGG
[SRA]
>SRA1022855
SRR035083.474083
454 Sequencing (SRP001804)
60
133
+
Pro
TGG
[SRA]
>SRA1032491
SRR035088.25517
454 Sequencing (SRP001809)
66
139
+
Pro
TGG
[SRA]
>SRA1032549
SRR035088.44577
454 Sequencing (SRP001809)
128
201
+
Pro
TGG
[SRA]
>SRA1033202
SRR035088.196259
454 Sequencing (SRP001809)
378
305
-
Pro
TGG
[SRA]
>SRA1033298
SRR035088.218076
454 Sequencing (SRP001809)
214
287
+
Pro
TGG
[SRA]
>SRA1033701
SRR035088.329344
454 Sequencing (SRP001809)
192
119
-
Pro
TGG
[SRA]
>SRA1034314
SRR035089.54866
454 Sequencing (SRP001810)
201
128
-
Pro
TGG
[SRA]
>SRA1035691
SRR035089.355870
454 Sequencing (SRP001810)
356
283
-
Pro
TGG
[SRA]
>SRA1036830
SRR035090.19647
454 Sequencing (SRP001811)
196
123
-
Pro
TGG
[SRA]
>SRA1036903
SRR035090.35897
454 Sequencing (SRP001811)
196
123
-
Pro
TGG
[SRA]
>SRA1036906
SRR035090.36822
454 Sequencing (SRP001811)
196
123
-
Pro
TGG
[SRA]
>SRA1036986
SRR035090.52826
454 Sequencing (SRP001811)
196
123
-
Pro
TGG
[SRA]
>SRA1037060
SRR035090.68587
454 Sequencing (SRP001811)
213
140
-
Pro
TGG
[SRA]
>SRA1037105
SRR035090.74400
454 Sequencing (SRP001811)
234
161
-
Pro
TGG
[SRA]
>SRA1037273
SRR035090.105891
454 Sequencing (SRP001811)
313
386
+
Pro
TGG
[SRA]
>SRA1037312
SRR035090.111743
454 Sequencing (SRP001811)
121
48
-
Pro
TGG
[SRA]
>SRA1037316
SRR035090.112700
454 Sequencing (SRP001811)
228
155
-
Pro
TGG
[SRA]
>SRA1037388
SRR035090.127462
454 Sequencing (SRP001811)
331
258
-
Pro
TGG
[SRA]
>SRA1037594
SRR035090.160410
454 Sequencing (SRP001811)
377
304
-
Pro
TGG
[SRA]
>SRA1037608
SRR035090.163012
454 Sequencing (SRP001811)
91
18
-
Pro
TGG
[SRA]
>SRA1037718
SRR035090.180084
454 Sequencing (SRP001811)
123
196
+
Pro
TGG
[SRA]
>SRA1037736
SRR035090.184216
454 Sequencing (SRP001811)
91
18
-
Pro
TGG
[SRA]
>SRA1037826
SRR035090.202195
454 Sequencing (SRP001811)
17
90
+
Pro
TGG
[SRA]
>SRA1037837
SRR035090.203200
454 Sequencing (SRP001811)
324
397
+
Pro
TGG
[SRA]
>SRA1037865
SRR035090.207887
454 Sequencing (SRP001811)
91
18
-
Pro
TGG
[SRA]
>SRA1037973
SRR035090.228087
454 Sequencing (SRP001811)
36
109
+
Pro
TGG
[SRA]
>SRA1038004
SRR035090.232770
454 Sequencing (SRP001811)
339
412
+
Pro
TGG
[SRA]
>SRA1038017
SRR035090.234247
454 Sequencing (SRP001811)
284
357
+
Pro
TGG
[SRA]
>SRA1038030
SRR035090.235983
454 Sequencing (SRP001811)
493
420
-
Pro
TGG
[SRA]
>SRA1038161
SRR035090.256370
454 Sequencing (SRP001811)
114
187
+
Pro
TGG
[SRA]
>SRA1038305
SRR035090.284645
454 Sequencing (SRP001811)
128
55
-
Pro
TGG
[SRA]
>SRA1038351
SRR035090.290624
454 Sequencing (SRP001811)
221
294
+
Pro
TGG
[SRA]
>SRA1038354
SRR035090.290861
454 Sequencing (SRP001811)
233
306
+
Pro
TGG
[SRA]
>SRA1038372
SRR035090.292852
454 Sequencing (SRP001811)
411
484
+
Pro
TGG
[SRA]
>SRA1038458
SRR035090.309290
454 Sequencing (SRP001811)
350
423
+
Pro
TGG
[SRA]
>SRA1038467
SRR035090.310974
454 Sequencing (SRP001811)
95
22
-
Pro
TGG
[SRA]
>SRA1038499
SRR035090.316210
454 Sequencing (SRP001811)
355
282
-
Pro
TGG
[SRA]
>SRA1038661
SRR035090.345926
454 Sequencing (SRP001811)
133
206
+
Pro
TGG
[SRA]
>SRA1038811
SRR035090.371295
454 Sequencing (SRP001811)
205
132
-
Pro
TGG
[SRA]
>SRA1038851
SRR035090.379721
454 Sequencing (SRP001811)
233
306
+
Pro
TGG
[SRA]
>SRA1038913
SRR035090.393340
454 Sequencing (SRP001811)
287
214
-
Pro
TGG
[SRA]
>SRA1039121
SRR035090.428997
454 Sequencing (SRP001811)
445
372
-
Pro
TGG
[SRA]
>SRA1039173
SRR035090.437161
454 Sequencing (SRP001811)
125
198
+
Pro
TGG
[SRA]
>SRA1039217
SRR035090.446305
454 Sequencing (SRP001811)
402
475
+
Pro
TGG
[SRA]
>SRA1039239
SRR035090.449783
454 Sequencing (SRP001811)
233
306
+
Pro
TGG
[SRA]
>SRA1039317
SRR035090.465778
454 Sequencing (SRP001811)
93
20
-
Pro
TGG
[SRA]
>SRA1039644
SRR035090.535603
454 Sequencing (SRP001811)
91
18
-
Pro
TGG
[SRA]
>SRA1039646
SRR035090.535691
454 Sequencing (SRP001811)
158
231
+
Pro
TGG
[SRA]
>SRA1039752
SRR035090.560280
454 Sequencing (SRP001811)
135
208
+
Pro
TGG
[SRA]
>SRA1039767
SRR035090.564789
454 Sequencing (SRP001811)
233
306
+
Pro
TGG
[SRA]
>SRA1042479
SRR035091.395168
454 Sequencing (SRP001812)
282
209
-
Pro
TGG
[SRA]
>SRA1043696
SRR035092.162108
454 Sequencing (SRP001813)
128
55
-
Pro
TGG
[SRA]
>SRA1046940
SRR035093.422977
454 Sequencing (SRP001814)
313
240
-
Pro
TGG
[SRA]
>SRA1049829
SRR035095.144630
454 Sequencing (SRP001816)
203
130
-
Pro
TGG
[SRA]
>SRA1053970
SRR035099.20027
454 Sequencing (SRP001820)
238
311
+
Pro
TGG
[SRA]
>SRA1054311
SRR035099.104370
454 Sequencing (SRP001820)
235
308
+
Pro
TGG
[SRA]
>SRA1054456
SRR035099.135712
454 Sequencing (SRP001820)
201
128
-
Pro
TGG
[SRA]
>SRA1054492
SRR035099.146170
454 Sequencing (SRP001820)
121
48
-
Pro
TGG
[SRA]
>SRA1054605
SRR035099.171252
454 Sequencing (SRP001820)
220
147
-
Pro
TGG
[SRA]
>SRA1054781
SRR035099.210938
454 Sequencing (SRP001820)
220
147
-
Pro
TGG
[SRA]
>SRA1054871
SRR035099.241314
454 Sequencing (SRP001820)
138
65
-
Pro
TGG
[SRA]
>W1610947189
LUZT01000006
Chlorobiota
Chlorobiales bacterium Clorobi_01 [LUZT]
642973
643048
+
Pro
TGG
[ENA]
¡û
>W1610977652
LVWG01000033
Chlorobiota
Pelodictyon luteolum [LVWG]
121193
121266
+
Pro
TGG
[ENA]
¡û
Identical group No.453754 (12 seq.)
>WENV170627212
FUWD013232076
[FUWD] metagenome; unknown
8114
8188
+
Pro
TGG
[ENA]
¢þ
>WENV170632829
FUWD013387522
[FUWD] metagenome; unknown
8114
8188
+
Pro
TGG
[ENA]
¢þ
>SRA1035764
SRR035089.371555
454 Sequencing (SRP001810)
191
265
+
Pro
TGG
[SRA]
>SRA1041105
SRR035091.197225
454 Sequencing (SRP001812)
248
176
-
Pro
TGG
[SRA]
>SRA1041629
SRR035091.270599
454 Sequencing (SRP001812)
351
279
-
Pro
TGG
[SRA]
>SRA1042315
SRR035091.371283
454 Sequencing (SRP001812)
98
24
-
Pro
TGG
[SRA]
>SRA1042886
SRR035091.461539
454 Sequencing (SRP001812)
97
25
-
Pro
TGG
[SRA]
>SRA1044522
SRR035092.293202
454 Sequencing (SRP001813)
101
27
-
Pro
TGG
[SRA]
>SRA1048456
SRR035094.176939
454 Sequencing (SRP001815)
96
22
-
Pro
TGG
[SRA]
>SRA1049530
SRR035095.92017
454 Sequencing (SRP001816)
85
11
-
Pro
TGG
[SRA]
>SRA1049949
SRR035095.165496
454 Sequencing (SRP001816)
43
117
+
Pro
TGG
[SRA]
>SRA1050278
SRR035095.229166
454 Sequencing (SRP001816)
95
169
+
Pro
TGG
[SRA]
Identical group No.548009 (4 seq.)
>WENV170608231
FUWD010904886
[FUWD] metagenome; unknown
132
209
+
Pro
TGG
[ENA]
¢þ
>SRA1048448
SRR035094.175364
454 Sequencing (SRP001815)
152
77
-
Pro
TGG
[SRA]
>SRA1049892
SRR035095.155569
454 Sequencing (SRP001816)
143
220
+
Pro
TGG
[SRA]
>SRA1050398
SRR035095.253661
454 Sequencing (SRP001816)
288
211
-
Pro
TGG
[SRA]
Identical group No.548700 (5 seq.)
>WENV170621156
FUWD013050591
[FUWD] metagenome; unknown
1799
1874
+
Pro
TGG
[ENA]
¢þ
>WENV170629324
FUWD013267224
[FUWD] metagenome; unknown
1799
1874
+
Pro
TGG
[ENA]
¢þ
>SRA1041983
SRR035091.323065
454 Sequencing (SRP001812)
294
369
+
Pro
TGG
[SRA]
>SRA1042846
SRR035091.454813
454 Sequencing (SRP001812)
120
195
+
Pro
TGG
[SRA]
>SRA1050185
SRR035095.208131
454 Sequencing (SRP001816)
150
225
+
Pro
TGG
[SRA]
Identical group No.563079 (1 seq.)
>SRA1049417
SRR035095.74409
454 Sequencing (SRP001816)
230
304
+
Pro
TGG
[SRA]
Identical group No.563176 (1 seq.)
>SRA1049315
SRR035095.55374
454 Sequencing (SRP001816)
219
293
+
Pro
TGG
[SRA]
Identical group No.805106 (2 seq.)
>WENV170608012
FUWD010882816
[FUWD] metagenome; unknown
432
505
+
Pro
TGG
[ENA]
¢þ
>SRA1049595
SRR035095.100814
454 Sequencing (SRP001816)
220
147
-
Pro
TGG
[SRA]
Identical group No.805458 (6 seq.)
>WENV170623122
FUWD013137140
[FUWD] metagenome; unknown
581
654
+
Pro
TGG
[ENA]
¢þ
>WENV170631361
FUWD013349950
[FUWD] metagenome; unknown
581
654
+
Pro
TGG
[ENA]
¢þ
>SRA1020226
SRR035083.77010
454 Sequencing (SRP001804)
434
361
-
Pro
TGG
[SRA]
>SRA1041813
SRR035091.298256
454 Sequencing (SRP001812)
220
293
+
Pro
TGG
[SRA]
>SRA1049568
SRR035095.96912
454 Sequencing (SRP001816)
397
470
+
Pro
TGG
[SRA]
>SRA1049754
SRR035095.134777
454 Sequencing (SRP001816)
393
463
+
Pro
TGG
[SRA]
Identical group No.809573 (3 seq.)
>SRA1049095
SRR035095.18564
454 Sequencing (SRP001816)
279
208
-
Pro
TGG
[SRA]
>SRA1049618
SRR035095.105398
454 Sequencing (SRP001816)
280
209
-
Pro
TGG
[SRA]
>SRA1049699
SRR035095.121416
454 Sequencing (SRP001816)
257
186
-
Pro
TGG
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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