tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001816)

Anticodon = TTT

HIT: 31 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.256325 (1 seq.)
>SRA1050126 SRR035095.195779 454 Sequencing (SRP001816) 179 256 + Lys TTT [SRA]
Identical group No.272326 (3 seq.)
>WENV170607843 FUWD010860421 [FUWD] metagenome; unknown 191 267 + Lys TTT [ENA] ¢þ
>SRA1025903 SRR035085.105782 454 Sequencing (SRP001806) 210 286 + Lys TTT [SRA]
>SRA1050545 SRR035095.288861 454 Sequencing (SRP001816) 189 113 - Lys TTT [SRA]
Identical group No.272827 (6 seq.)
>WENV170626886 FUWD013229963 [FUWD] metagenome; unknown 6620 6544 - Lys TTT [ENA] ¢þ
>SRA1036000 SRR035089.424675 454 Sequencing (SRP001810) 375 299 - Lys TTT [SRA]
>SRA1040651 SRR035091.127607 454 Sequencing (SRP001812) 169 245 + Lys TTT [SRA]
>SRA1042658 SRR035091.425368 454 Sequencing (SRP001812) 98 22 - Lys TTT [SRA]
>SRA1049472 SRR035095.82693 454 Sequencing (SRP001816) 152 228 + Lys TTT [SRA]
>SRA1050371 SRR035095.246138 454 Sequencing (SRP001816) 324 400 + Lys TTT [SRA]
Identical group No.272845 (5 seq.)
>WENV170623283 FUWD013144372 [FUWD] metagenome; unknown 588 665 + Lys TTT [ENA] ¢þ
>WENV170631542 FUWD013356390 [FUWD] metagenome; unknown 588 665 + Lys TTT [ENA] ¢þ
>SRA1036147 SRR035089.455449 454 Sequencing (SRP001810) 91 168 + Lys TTT [SRA]
>SRA1049366 SRR035095.64885 454 Sequencing (SRP001816) 86 163 + Lys TTT [SRA]
>SRA1050510 SRR035095.279647 454 Sequencing (SRP001816) 249 172 - Lys TTT [SRA]
Identical group No.272894 (8 seq.)
>WENV170600299 FUWD010118958 [FUWD] metagenome; unknown 62 138 + Lys TTT [ENA] ¢þ
>WENV170620675 FUWD013036448 [FUWD] metagenome; unknown 744 668 - Lys TTT [ENA] ¢þ
>WENV170628820 FUWD013253717 [FUWD] metagenome; unknown 744 668 - Lys TTT [ENA] ¢þ
>SRA1032146 SRR035087.563301 454 Sequencing (SRP001808) 149 225 + Lys TTT [SRA]
>SRA1032699 SRR035088.81569 454 Sequencing (SRP001809) 284 360 + Lys TTT [SRA]
>SRA1033731 SRR035088.339037 454 Sequencing (SRP001809) 375 450 + Lys TTT [SRA]
>SRA1036393 SRR035089.509828 454 Sequencing (SRP001810) 202 278 + Lys TTT [SRA]
>SRA1049822 SRR035095.143012 454 Sequencing (SRP001816) 158 234 + Lys TTT [SRA]
Identical group No.300465 (6 seq.)
>WENV170618322 FUWD012962662 [FUWD] metagenome; unknown 553 477 - Lys TTT [ENA] ¢þ
>WENV170626025 FUWD013212316 [FUWD] metagenome; unknown 258 182 - Lys TTT [ENA] ¢þ
>SRA1030168 SRR035087.237449 454 Sequencing (SRP001808) 193 117 - Lys TTT [SRA]
>SRA1032960 SRR035088.140886 454 Sequencing (SRP001809) 107 31 - Lys TTT [SRA]
>SRA1034132 SRR035088.503129 454 Sequencing (SRP001809) 138 62 - Lys TTT [SRA]
>SRA1050222 SRR035095.214638 454 Sequencing (SRP001816) 123 199 + Lys TTT [SRA]
Identical group No.300520 (9 seq.)
>WENV170622516 FUWD013107606 [FUWD] metagenome; unknown 940 1016 + Lys TTT [ENA] ¢þ
>WENV170630741 FUWD013321923 [FUWD] metagenome; unknown 940 1016 + Lys TTT [ENA] ¢þ
>SRA1019519 SRR035082.470468 454 Sequencing (SRP001803) 233 307 + Lys TTT [SRA]
>SRA1030449 SRR035087.280756 454 Sequencing (SRP001808) 100 24 - Lys TTT [SRA]
>SRA1041757 SRR035091.288473 454 Sequencing (SRP001812) 35 111 + Lys TTT [SRA]
>SRA1041840 SRR035091.303504 454 Sequencing (SRP001812) 230 156 - Lys TTT [SRA]
>SRA1049049 SRR035095.6943 454 Sequencing (SRP001816) 264 188 - Lys TTT [SRA]
>SRA1049061 SRR035095.12804 454 Sequencing (SRP001816) 265 189 - Lys TTT [SRA]
>SRA1049932 SRR035095.162529 454 Sequencing (SRP001816) 266 190 - Lys TTT [SRA]
Identical group No.357523 (7 seq.)
>WENV170598839 FUWD010051030 [FUWD] metagenome; unknown 108 33 - Lys TTT [ENA] ¢þ
>WENV170624528 FUWD013182687 [FUWD] metagenome; unknown 179 104 - Lys TTT [ENA] ¢þ
>WENV170632814 FUWD013387402 [FUWD] metagenome; unknown 179 104 - Lys TTT [ENA] ¢þ
>SRA1040426 SRR035091.95882 454 Sequencing (SRP001812) 90 165 + Lys TTT [SRA]
>SRA1042428 SRR035091.385690 454 Sequencing (SRP001812) 108 33 - Lys TTT [SRA]
>SRA1043819 SRR035092.180089 454 Sequencing (SRP001813) 186 111 - Lys TTT [SRA]
>SRA1049050 SRR035095.7343 454 Sequencing (SRP001816) 145 220 + Lys TTT [SRA]
Identical group No.358286 (8 seq.)
>W1711403751 MFWV01000001 Unclassified Candidatus Pacebacteria bacterium RIFOXYA1_FULL_38_18 [MFWV] 38411 38487 + Lys TTT [ENA] ¡û
>W1711403794 MFWW01000002 Unclassified Candidatus Pacebacteria bacterium RIFOXYB1_FULL_39_46 [MFWW] 37580 37656 + Lys TTT [ENA] ¡û
>W1711403868 MFWY01000003 Unclassified Candidatus Pacebacteria bacterium RIFOXYC1_FULL_39_21 [MFWY] 37785 37861 + Lys TTT [ENA] ¡û
>W1711403903 MFWZ01000001 Unclassified Candidatus Pacebacteria bacterium RIFOXYD1_FULL_39_27 [MFWZ] 37564 37640 + Lys TTT [ENA] ¡û
>WENV170611637 FUWD012364001 [FUWD] metagenome; unknown 168 244 + Lys TTT [ENA] ¢þ
>SRA1018840 SRR035082.355395 454 Sequencing (SRP001803) 171 247 + Lys TTT [SRA]
>SRA1049403 SRR035095.71843 454 Sequencing (SRP001816) 93 169 + Lys TTT [SRA]
>WENV069109 AACY023753516 Marine microbial communities from Global Ocean Sampling (GOS) 636 714 + Lys TTT [ENA]
Identical group No.372150 (1 seq.)
>SRA1049476 SRR035095.82976 454 Sequencing (SRP001816) 375 299 - Lys TTT [SRA]
Identical group No.372199 (1 seq.)
>SRA1050065 SRR035095.185431 454 Sequencing (SRP001816) 264 339 + Lys TTT [SRA]
Identical group No.372203 (1 seq.)
>SRA1050113 SRR035095.194894 454 Sequencing (SRP001816) 187 112 - Lys TTT [SRA]
Identical group No.372207 (1 seq.)
>SRA1050211 SRR035095.213080 454 Sequencing (SRP001816) 269 342 + Lys TTT [SRA]
Identical group No.453642 (4 seq.)
>WENV170601726 FUWD010190444 [FUWD] metagenome; unknown 669 594 - Lys TTT [ENA] ¢þ
>SRA1035147 SRR035089.246214 454 Sequencing (SRP001810) 426 351 - Lys TTT [SRA]
>SRA1049523 SRR035095.90082 454 Sequencing (SRP001816) 153 228 + Lys TTT [SRA]
>SRA1049744 SRR035095.131764 454 Sequencing (SRP001816) 247 322 + Lys TTT [SRA]
Identical group No.453666 (11 seq.)
>WENV170621002 FUWD013045630 [FUWD] metagenome; unknown 296 371 + Lys TTT [ENA] ¢þ
>WENV170629159 FUWD013262525 [FUWD] metagenome; unknown 296 371 + Lys TTT [ENA] ¢þ
>SRA1019360 SRR035082.441958 454 Sequencing (SRP001803) 266 341 + Lys TTT [SRA]
>SRA1035279 SRR035089.274142 454 Sequencing (SRP001810) 320 395 + Lys TTT [SRA]
>SRA1040609 SRR035091.122403 454 Sequencing (SRP001812) 307 232 - Lys TTT [SRA]
>SRA1041196 SRR035091.212361 454 Sequencing (SRP001812) 398 323 - Lys TTT [SRA]
>SRA1042463 SRR035091.390753 454 Sequencing (SRP001812) 92 167 + Lys TTT [SRA]
>SRA1042632 SRR035091.419678 454 Sequencing (SRP001812) 225 150 - Lys TTT [SRA]
>SRA1044364 SRR035092.266317 454 Sequencing (SRP001813) 470 395 - Lys TTT [SRA]
>SRA1049453 SRR035095.80167 454 Sequencing (SRP001816) 309 234 - Lys TTT [SRA]
>SRA1050391 SRR035095.250939 454 Sequencing (SRP001816) 378 303 - Lys TTT [SRA]
Identical group No.453745 (4 seq.)
>WENV170621638 FUWD013066782 [FUWD] metagenome; unknown 212 137 - Lys TTT [ENA] ¢þ
>WENV170629828 FUWD013282731 [FUWD] metagenome; unknown 212 137 - Lys TTT [ENA] ¢þ
>SRA1035699 SRR035089.356677 454 Sequencing (SRP001810) 436 361 - Lys TTT [SRA]
>SRA1049643 SRR035095.110017 454 Sequencing (SRP001816) 96 172 + Lys TTT [SRA]
Identical group No.484502 (4 seq.)
>WENV170612118 FUWD012506833 [FUWD] metagenome; unknown 240 166 - Lys TTT [ENA] ¢þ
>SRA1031882 SRR035087.503650 454 Sequencing (SRP001808) 240 166 - Lys TTT [SRA]
>SRA1031998 SRR035087.528579 454 Sequencing (SRP001808) 294 220 - Lys TTT [SRA]
>SRA1050669 SRR035095.319699 454 Sequencing (SRP001816) 225 151 - Lys TTT [SRA]
Identical group No.507001 (19 seq.)
>W131110492 APJX01000001 Thermodesulfobacteriota Desulfotignum phosphitoxidans DSM 13687 [APJX] 275055 274980 - Lys TTT [ENA] ¡û
>W131169740 AREY01000035 Thermodesulfobacteriota Desulfobacter curvatus DSM 3379 [AREY] 51366 51441 + Lys TTT [ENA] ¡û
>W131217244 ATWO01000001 Thermodesulfobacteriota Desulfotignum balticum DSM 7044 [ATWO] 852878 852953 + Lys TTT [ENA] ¡û
>WENV180043707 LQAI01009191 [LQAI] bioreactor metagenome; bioreactor_5 inoculated with Wadden Sea sediment; 1st replicate of a sulfate-reducing system that 738 813 + Lys TTT [ENA] ¢þ
>WENV180317183 OBKJ01044691 [OBKJ] metagenome; hydrothermal vent 89 164 + Lys TTT [ENA] ¢þ
>WENV181207951 OFBA01004366 [OFBA] metagenome; hydrothermal vent 164 239 + Lys TTT [ENA] ¢þ
>WENV181208378 OFBB01006742 [OFBB] metagenome; hydrothermal vent 758 833 + Lys TTT [ENA] ¢þ
>WENV181208800 OFBC01007980 [OFBC] metagenome; hydrothermal vent 338 413 + Lys TTT [ENA] ¢þ
>WENV181224877 OFDG01012519 [OFDG] metagenome; hydrothermal vent 343 416 + Lys TTT [ENA] ¢þ
>WENV181225594 OFDI01011336 [OFDI] metagenome; hydrothermal vent 497 422 - Lys TTT [ENA] ¢þ
>WENV183708618 PDWI01018076 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1601 1526 - Lys TTT [ENA] ¢þ
>WENV183718366 PDWJ01003586 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 47551 47626 + Lys TTT [ENA] ¢þ
>WENV170605236 FUWD010461043 [FUWD] metagenome; unknown 143 218 + Lys TTT [ENA] ¢þ
>WENV170646965 JQIA01006891 [JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead 5756 5829 + Lys TTT [ENA] ¢þ
>W141817091 JQKJ01000014 Thermodesulfobacteriota Desulfobacter vibrioformis DSM 8776 [JQKJ] 634 559 - Lys TTT [ENA] ¡û
>W1810695170 QLNI01000001 Thermodesulfobacteriota Desulfobacter hydrogenophilus DSM 3380 [QLNI] 135175 135250 + Lys TTT [ENA] ¡û
>SRA1049180 SRR035095.33724 454 Sequencing (SRP001816) 142 67 - Lys TTT [SRA]
>SRA1054135 SRR035099.66900 454 Sequencing (SRP001820) 158 233 + Lys TTT [SRA]
>SRA1054786 SRR035099.213544 454 Sequencing (SRP001820) 332 257 - Lys TTT [SRA]
Identical group No.519867 (11 seq.)
>WENV183802560 PVBE010768971 [PVBE] marine metagenome; water 830 757 - Lys TTT [ENA] ¢þ
>WENV170384451 CETX01303462 [CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1207 1280 + Lys TTT [ENA] ¢þ
>WENV170398941 CEUD01327117 [CEUD] marine metagenome genome assembly TARA_137_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 858 931 + Lys TTT [ENA] ¢þ
>WENV170621011 FUWD013045923 [FUWD] metagenome; unknown 461 534 + Lys TTT [ENA] ¢þ
>WENV170629171 FUWD013262790 [FUWD] metagenome; unknown 461 534 + Lys TTT [ENA] ¢þ
>SRA1032685 SRR035088.79460 454 Sequencing (SRP001809) 292 219 - Lys TTT [SRA]
>SRA1034041 SRR035088.463266 454 Sequencing (SRP001809) 259 332 + Lys TTT [SRA]
>SRA1037755 SRR035090.189188 454 Sequencing (SRP001811) 219 146 - Lys TTT [SRA]
>SRA1039254 SRR035090.453069 454 Sequencing (SRP001811) 264 191 - Lys TTT [SRA]
>SRA1039537 SRR035090.511152 454 Sequencing (SRP001811) 264 191 - Lys TTT [SRA]
>SRA1050533 SRR035095.284694 454 Sequencing (SRP001816) 102 29 - Lys TTT [SRA]
Identical group No.522578 (2 seq.)
>WENV170570535 FLOH01000009 [FLOH] marine metagenome; water 555690 555615 - Lys TTT [ENA] ¢þ
>SRA1049985 SRR035095.171943 454 Sequencing (SRP001816) 272 347 + Lys TTT [SRA]
Identical group No.547978 (2 seq.)
>WENV170607844 FUWD010860541 [FUWD] metagenome; unknown 35 110 + Lys TTT [ENA] ¢þ
>SRA1050612 SRR035095.305881 454 Sequencing (SRP001816) 182 107 - Lys TTT [SRA]
Identical group No.548314 (3 seq.)
>WENV170611756 FUWD012389079 [FUWD] metagenome; unknown 100 175 + Lys TTT [ENA] ¢þ
>SRA1022136 SRR035083.357602 454 Sequencing (SRP001804) 138 213 + Lys TTT [SRA]
>SRA1049412 SRR035095.73904 454 Sequencing (SRP001816) 111 186 + Lys TTT [SRA]
Identical group No.548430 (4 seq.)
>WENV170612837 FUWD012700027 [FUWD] metagenome; unknown 235 310 + Lys TTT [ENA] ¢þ
>SRA1019391 SRR035082.448570 454 Sequencing (SRP001803) 76 151 + Lys TTT [SRA]
>SRA1047999 SRR035094.84957 454 Sequencing (SRP001815) 86 11 - Lys TTT [SRA]
>SRA1050315 SRR035095.235732 454 Sequencing (SRP001816) 259 334 + Lys TTT [SRA]
Identical group No.563057 (1 seq.)
>SRA1049101 SRR035095.19636 454 Sequencing (SRP001816) 312 237 - Lys TTT [SRA]
Identical group No.563069 (1 seq.)
>SRA1049264 SRR035095.47634 454 Sequencing (SRP001816) 537 462 - Lys TTT [SRA]
Identical group No.563071 (3 seq.)
>SRA1049283 SRR035095.49850 454 Sequencing (SRP001816) 102 177 + Lys TTT [SRA]
>SRA1049650 SRR035095.111346 454 Sequencing (SRP001816) 102 177 + Lys TTT [SRA]
>SRA1049716 SRR035095.124307 454 Sequencing (SRP001816) 102 177 + Lys TTT [SRA]
Identical group No.563081 (1 seq.)
>SRA1049471 SRR035095.82661 454 Sequencing (SRP001816) 7 82 + Lys TTT [SRA]
Identical group No.563126 (1 seq.)
>SRA1050130 SRR035095.196898 454 Sequencing (SRP001816) 39 112 + Lys TTT [SRA]
Identical group No.711129 (2 seq.)
>WENV170612795 FUWD012691106 [FUWD] metagenome; unknown 311 239 - Lys TTT [ENA] ¢þ
>SRA1049495 SRR035095.86524 454 Sequencing (SRP001816) 320 248 - Lys TTT [SRA]
Identical group No.805448 (15 seq.)
>WENV170622865 FUWD013124413 [FUWD] metagenome; unknown 1588 1661 + Lys TTT [ENA] ¢þ
>WENV170624357 FUWD013180374 [FUWD] metagenome; unknown 8287 8360 + Lys TTT [ENA] ¢þ
>WENV170627823 FUWD013237777 [FUWD] metagenome; unknown 11473 11546 + Lys TTT [ENA] ¢þ
>WENV170631084 FUWD013337946 [FUWD] metagenome; unknown 1588 1661 + Lys TTT [ENA] ¢þ
>SRA1017421 SRR035082.136504 454 Sequencing (SRP001803) 83 10 - Lys TTT [SRA]
>SRA1033243 SRR035088.204515 454 Sequencing (SRP001809) 132 59 - Lys TTT [SRA]
>SRA1040082 SRR035091.34537 454 Sequencing (SRP001812) 202 129 - Lys TTT [SRA]
>SRA1040294 SRR035091.73472 454 Sequencing (SRP001812) 81 8 - Lys TTT [SRA]
>SRA1040649 SRR035091.127285 454 Sequencing (SRP001812) 279 352 + Lys TTT [SRA]
>SRA1041005 SRR035091.180668 454 Sequencing (SRP001812) 48 121 + Lys TTT [SRA]
>SRA1041521 SRR035091.255238 454 Sequencing (SRP001812) 236 163 - Lys TTT [SRA]
>SRA1041735 SRR035091.284316 454 Sequencing (SRP001812) 11 84 + Lys TTT [SRA]
>SRA1042824 SRR035091.451197 454 Sequencing (SRP001812) 294 221 - Lys TTT [SRA]
>SRA1045087 SRR035092.407544 454 Sequencing (SRP001813) 178 251 + Lys TTT [SRA]
>SRA1050437 SRR035095.262629 454 Sequencing (SRP001816) 269 196 - Lys TTT [SRA]
Identical group No.809590 (1 seq.)
>SRA1049898 SRR035095.156424 454 Sequencing (SRP001816) 386 459 + Lys TTT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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