tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001817)

Anticodon = CGA

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.54000 (18 seq.)
>WENV182547463 OJBS01007619 [OJBS] seawater metagenome; Sea water 164 75 - Ser CGA [ENA] ¢þ
>WENV182551114 OJCB01023190 [OJCB] seawater metagenome; Sea water 220 309 + Ser CGA [ENA] ¢þ
>WENV182553112 OJCR01000041 [OJCR] seawater metagenome; Sea water 46361 46450 + Ser CGA [ENA] ¢þ
>WENV182565011 OJEF01027318 [OJEF] seawater metagenome; Sea water 377 466 + Ser CGA [ENA] ¢þ
>WENV182567883 OJEP01001448 [OJEP] seawater metagenome; Sea water 1418 1329 - Ser CGA [ENA] ¢þ
>WENV182572335 OJFL01003698 [OJFL] seawater metagenome; Sea water 2327 2416 + Ser CGA [ENA] ¢þ
>WENV182573132 OJFP01000155 [OJFP] seawater metagenome; Sea water 18205 18116 - Ser CGA [ENA] ¢þ
>WENV182579085 OJGS01000292 [OJGS] seawater metagenome; Sea water 15408 15319 - Ser CGA [ENA] ¢þ
>WENV182580354 OJGW01000076 [OJGW] seawater metagenome; Sea water 24577 24666 + Ser CGA [ENA] ¢þ
>WENV182584685 OJHG01005282 [OJHG] seawater metagenome; Sea water 2595 2506 - Ser CGA [ENA] ¢þ
>WENV182586736 OJHK01003978 [OJHK] seawater metagenome; Sea water 942 1031 + Ser CGA [ENA] ¢þ
>WENV183060634 OLHY01000918 [OLHY] seawater metagenome; Sea water 8040 8129 + Ser CGA [ENA] ¢þ
>WENV170569979 FLMP01372822 [FLMP] seawater metagenome; seawater 266 177 - Ser CGA [ENA] ¢þ
>WENV170605219 FUWD010459277 [FUWD] metagenome; unknown 253 164 - Ser CGA [ENA] ¢þ
>WENV170950323 MEHZ011490812 [MEHZ] marine metagenome; marine surface water 1051 1140 + Ser CGA [ENA] ¢þ
>SRA1050927 SRR035096.53101 454 Sequencing (SRP001817) 233 144 - Ser CGA [SRA]
>SRA1051639 SRR035098.45130 454 Sequencing (SRP001819) 255 166 - Ser CGA [SRA]
>SRA1052497 SRR035098.215124 454 Sequencing (SRP001819) 368 457 + Ser CGA [SRA]
Identical group No.89123 (31 seq.)
>C171072604 CP018091 Cyanobacteriota Synechococcus sp. SynAce01 [CP018091] 714440 714356 - Ser CGA - ¡û
>w013590 AANO01000009 Cyanobacteriota Synechococcus sp. WH 5701 [AANO] 103121 103210 + Ser CGA [ENA] ¡û
>WENV180114750 OAPS01040874 [OAPS] marine metagenome; sea water 383 468 + Ser CGA [ENA] ¢þ
>WENV180364025 OBNZ01054408 [OBNZ] marine metagenome; ENVO:00002010 296 381 + Ser CGA [ENA] ¢þ
>WENV180377684 OBON01082177 [OBON] marine metagenome; sea water 14 99 + Ser CGA [ENA] ¢þ
>WENV181377193 OFRA01003811 [OFRA] wastewater metagenome; Lake Maggiore Verbania 1896 1812 - Ser CGA [ENA] ¢þ
>WENV170604008 FUWD010352515 [FUWD] metagenome; unknown 472 557 + Ser CGA [ENA] ¢þ
>WENV170606559 FUWD010684197 [FUWD] metagenome; unknown 101 15 - Ser CGA [ENA] ¢þ
>WENV170614936 FUWD012844722 [FUWD] metagenome; unknown 2256 2172 - Ser CGA [ENA] ¢þ
>W1911176882 NQKW01000010 Cyanobacteriota Synechococcus sp. 1G10 [NQKW] 2371 2285 - Ser CGA [ENA] ¡û
>W1911176892 NQKX01000001 Cyanobacteriota Synechococcus sp. MW101C3 [NQKX] 160461 160547 + Ser CGA [ENA] ¡û
>W1911177003 NQKZ01000009 Cyanobacteriota Synechococcus sp. 8F6 [NQKZ] 3455 3369 - Ser CGA [ENA] ¡û
>W1810387037 PXVC01000074 Cyanobacteriota Synechococcus lacustris Tous [PXVC] 7252 7168 - Ser CGA [ENA] ¡û
>W1810389441 PXXO01000003 Cyanobacteriota Cyanobium usitatum str. Tous [PXXO] 188917 189002 + Ser CGA [ENA] ¡û
>SRA1027002 SRR035086.40675 454 Sequencing (SRP001807) 191 107 - Ser CGA [SRA]
>SRA1027141 SRR035086.70850 454 Sequencing (SRP001807) 228 144 - Ser CGA [SRA]
>SRA1027237 SRR035086.87935 454 Sequencing (SRP001807) 191 107 - Ser CGA [SRA]
>SRA1027435 SRR035086.124615 454 Sequencing (SRP001807) 17 101 + Ser CGA [SRA]
>SRA1027451 SRR035086.126676 454 Sequencing (SRP001807) 70 154 + Ser CGA [SRA]
>SRA1027698 SRR035086.176274 454 Sequencing (SRP001807) 191 107 - Ser CGA [SRA]
>SRA1028303 SRR035086.295447 454 Sequencing (SRP001807) 399 315 - Ser CGA [SRA]
>SRA1032298 SRR035087.597873 454 Sequencing (SRP001808) 251 167 - Ser CGA [SRA]
>SRA1051229 SRR035096.113123 454 Sequencing (SRP001817) 296 212 - Ser CGA [SRA]
>SRA1051313 SRR035096.135363 454 Sequencing (SRP001817) 213 129 - Ser CGA [SRA]
>SRA1051649 SRR035098.48402 454 Sequencing (SRP001819) 70 154 + Ser CGA [SRA]
>SRA1051758 SRR035098.71335 454 Sequencing (SRP001819) 70 154 + Ser CGA [SRA]
>SRA1052022 SRR035098.124849 454 Sequencing (SRP001819) 70 154 + Ser CGA [SRA]
>SRA1052035 SRR035098.127603 454 Sequencing (SRP001819) 74 158 + Ser CGA [SRA]
>SRA1052080 SRR035098.136528 454 Sequencing (SRP001819) 70 154 + Ser CGA [SRA]
>W1610626668 LICO01000295 Cyanobacteriota cyanobacterium BACL30 MAG-120619-bin27 [LICO] 1701 1786 + Ser CGA [ENA] ¡û
>W1710757795 LICO01000295 Cyanobacteriota cyanobacterium BACL30 MAG-120619-bin27 [LICO] 1701 1786 + Ser CGA [ENA] ¡û
Identical group No.98591 (5 seq.)
>WENV170619815 FUWD013021624 [FUWD] metagenome; unknown 846 759 - Ser CGA [ENA] ¢þ
>WENV170627935 FUWD013239836 [FUWD] metagenome; unknown 846 759 - Ser CGA [ENA] ¢þ
>SRA1024681 SRR035084.374668 454 Sequencing (SRP001805) 205 118 - Ser CGA [SRA]
>SRA1050996 SRR035096.67236 454 Sequencing (SRP001817) 301 388 + Ser CGA [SRA]
>SRA1051642 SRR035098.45474 454 Sequencing (SRP001819) 103 190 + Ser CGA [SRA]
Identical group No.206662 (2 seq.)
>SRA1027363 SRR035086.112759 454 Sequencing (SRP001807) 437 356 - Ser CGA [SRA]
>SRA1051017 SRR035096.69958 454 Sequencing (SRP001817) 364 283 - Ser CGA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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