tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001817)

Anticodon = TCG

HIT: 8 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.285343 (36 seq.)
>C171088756 CP019046 Gammaproteobacteria Halioglobus pacificus RR3-57 [CP019046] 1421043 1421119 + Arg TCG - ¡û
>w021594 AAVT01000009 Gammaproteobacteria marine gamma proteobacterium HTCC2143 [AAVT] 78208 78286 + Arg TCG [ENA] ¡û
>w013918 AAOA01000004 Gammaproteobacteria Congregibacter litoralis KT 71 [AAOA] 205375 205451 + Arg TCG [ENA] ¡û
>WENV180282632 OBIC01000551 [OBIC] beach sand metagenome; beach sand 1493 1417 - Arg TCG [ENA] ¢þ
>WENV180294001 OBIY01008422 [OBIY] beach sand metagenome; beach sand 1478 1402 - Arg TCG [ENA] ¢þ
>WENV180359107 OBNR01006818 [OBNR] marine metagenome; Seawater_00002010_00002149 164 240 + Arg TCG [ENA] ¢þ
>WENV180362089 OBNW01034909 [OBNW] marine metagenome; ENVO:00002010, 'SEA WATER 288 364 + Arg TCG [ENA] ¢þ
>WENV180378791 OBOO01146233 [OBOO] marine metagenome; ENVO 00002150 125 201 + Arg TCG [ENA] ¢þ
>WENV180393479 OBPQ01050885 [OBPQ] marine metagenome; polypropylene bottle 305 229 - Arg TCG [ENA] ¢þ
>WENV180396910 OBPW01031975 [OBPW] marine metagenome; seawater 282 206 - Arg TCG [ENA] ¢þ
>WENV180398823 OBQB01001472 [OBQB] marine metagenome; ENVO.00002150 407 483 + Arg TCG [ENA] ¢þ
>WENV180587314 OCON01167959 [OCON] marine metagenome; seawater 110 186 + Arg TCG [ENA] ¢þ
>WENV181092987 OEBK01136108 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 291 215 - Arg TCG [ENA] ¢þ
>WENV181329604 OFLX01027346 [OFLX] seawater metagenome; seawater 446 522 + Arg TCG [ENA] ¢þ
>WENV181392195 OFRW01010208 [OFRW] seawater metagenome; seawater 300 224 - Arg TCG [ENA] ¢þ
>WENV182548716 OJBX01000027 [OJBX] seawater metagenome; Sea water 148075 148151 + Arg TCG [ENA] ¢þ
>WENV182568249 OJES01001426 [OJES] seawater metagenome; Sea water 876 952 + Arg TCG [ENA] ¢þ
>WENV182576505 OJFX01042358 [OJFX] seawater metagenome; Sea water 220 296 + Arg TCG [ENA] ¢þ
>WENV182579788 OJGU01000004 [OJGU] seawater metagenome; Sea water 152289 152365 + Arg TCG [ENA] ¢þ
>WENV182581251 OJGX01001479 [OJGX] seawater metagenome; Sea water 7638 7714 + Arg TCG [ENA] ¢þ
>WENV182591551 OJIO01000383 [OJIO] seawater metagenome; Sea water 22024 21948 - Arg TCG [ENA] ¢þ
>WENV183062061 OLID01000003 [OLID] seawater metagenome; Sea water 165335 165411 + Arg TCG [ENA] ¢þ
>WENV183626917 OOGK01010562 [OOGK] marine metagenome; seawater 698 774 + Arg TCG [ENA] ¢þ
>WENV183700302 OZSS01168531 [OZSS] metagenome; Seawater sample 378 302 - Arg TCG [ENA] ¢þ
>WENV170535832 CEWP01111838 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1653 1729 + Arg TCG [ENA] ¢þ
>WENV170566858 FLLY01008145 [FLLY] seawater metagenome; seawater 380 304 - Arg TCG [ENA] ¢þ
>WENV170568559 FLMP01049767 [FLMP] seawater metagenome; seawater 698 774 + Arg TCG [ENA] ¢þ
>WENV170604934 FUWD010436738 [FUWD] metagenome; unknown 456 532 + Arg TCG [ENA] ¢þ
>WENV170816528 MDSX01031991 [MDSX] marine metagenome; seawater 4112 4036 - Arg TCG [ENA] ¢þ
>WENV170881579 MDTC01133470 [MDTC] marine metagenome; seawater 25935 26011 + Arg TCG [ENA] ¢þ
>WENV170922766 MDTG01037169 [MDTG] marine metagenome; seawater 5226 5150 - Arg TCG [ENA] ¢þ
>W09112195 ABXQ01000068 Gammaproteobacteria marine gamma proteobacterium HTCC2148 [ABXQ] 40850 40926 + Arg TCG [ENA] ¡û
>W09118431 ACCX01000007 Gammaproteobacteria gamma proteobacterium NOR5-3 [ACCX] 41706 41630 - Arg TCG [ENA] ¡û
>W1810196409 PKUS01000001 Gammaproteobacteria Pseudohalioglobus lutimaris HF004 [PKUS] 98214 98290 + Arg TCG [ENA] ¡û
>SRA1050758 SRR035096.17466 454 Sequencing (SRP001817) 206 282 + Arg TCG [SRA]
>WENV055970 AACY023245047 Marine microbial communities from Global Ocean Sampling (GOS) 1173 1249 + Arg TCG [ENA]
Identical group No.335163 (2 seq.)
>WENV170572092 FLOH01000526 [FLOH] marine metagenome; water 3498 3420 - Arg TCG [ENA] ¢þ
>SRA1051178 SRR035096.102011 454 Sequencing (SRP001817) 175 101 - Arg TCG [SRA]
Identical group No.422570 (1 seq.)
>SRA1051425 SRR035096.175214 454 Sequencing (SRP001817) 128 55 - Arg TCG [SRA]
Identical group No.548584 (36 seq.)
>WENV180637821 OCRG01141051 [OCRG] marine metagenome; seawater 156 228 + Arg TCG [ENA] ¢þ
>WENV170617213 FUWD012918122 [FUWD] metagenome; unknown 170 98 - Arg TCG [ENA] ¢þ
>WENV170617214 FUWD012918124 [FUWD] metagenome; unknown 3672 3600 - Arg TCG [ENA] ¢þ
>SRA1025325 SRR035084.552432 454 Sequencing (SRP001805) 198 126 - Arg TCG [SRA]
>SRA1026856 SRR035086.11278 454 Sequencing (SRP001807) 210 138 - Arg TCG [SRA]
>SRA1026870 SRR035086.16971 454 Sequencing (SRP001807) 90 18 - Arg TCG [SRA]
>SRA1026889 SRR035086.21482 454 Sequencing (SRP001807) 372 444 + Arg TCG [SRA]
>SRA1027073 SRR035086.57270 454 Sequencing (SRP001807) 99 171 + Arg TCG [SRA]
>SRA1027148 SRR035086.71703 454 Sequencing (SRP001807) 97 169 + Arg TCG [SRA]
>SRA1027185 SRR035086.76707 454 Sequencing (SRP001807) 364 436 + Arg TCG [SRA]
>SRA1027219 SRR035086.84474 454 Sequencing (SRP001807) 226 298 + Arg TCG [SRA]
>SRA1027344 SRR035086.109781 454 Sequencing (SRP001807) 297 225 - Arg TCG [SRA]
>SRA1027345 SRR035086.109785 454 Sequencing (SRP001807) 318 246 - Arg TCG [SRA]
>SRA1027346 SRR035086.110371 454 Sequencing (SRP001807) 317 245 - Arg TCG [SRA]
>SRA1027536 SRR035086.143696 454 Sequencing (SRP001807) 230 158 - Arg TCG [SRA]
>SRA1027559 SRR035086.146942 454 Sequencing (SRP001807) 96 168 + Arg TCG [SRA]
>SRA1027570 SRR035086.149949 454 Sequencing (SRP001807) 138 210 + Arg TCG [SRA]
>SRA1027608 SRR035086.159397 454 Sequencing (SRP001807) 511 439 - Arg TCG [SRA]
>SRA1027693 SRR035086.175238 454 Sequencing (SRP001807) 242 314 + Arg TCG [SRA]
>SRA1027758 SRR035086.187725 454 Sequencing (SRP001807) 340 412 + Arg TCG [SRA]
>SRA1028102 SRR035086.259184 454 Sequencing (SRP001807) 207 279 + Arg TCG [SRA]
>SRA1028150 SRR035086.267183 454 Sequencing (SRP001807) 130 58 - Arg TCG [SRA]
>SRA1028272 SRR035086.289145 454 Sequencing (SRP001807) 183 255 + Arg TCG [SRA]
>SRA1028283 SRR035086.291199 454 Sequencing (SRP001807) 112 40 - Arg TCG [SRA]
>SRA1028355 SRR035086.307633 454 Sequencing (SRP001807) 90 18 - Arg TCG [SRA]
>SRA1028361 SRR035086.308327 454 Sequencing (SRP001807) 239 167 - Arg TCG [SRA]
>SRA1028390 SRR035086.314651 454 Sequencing (SRP001807) 239 167 - Arg TCG [SRA]
>SRA1028467 SRR035086.333337 454 Sequencing (SRP001807) 274 202 - Arg TCG [SRA]
>SRA1028485 SRR035086.337192 454 Sequencing (SRP001807) 86 158 + Arg TCG [SRA]
>SRA1028489 SRR035086.338822 454 Sequencing (SRP001807) 274 202 - Arg TCG [SRA]
>SRA1050787 SRR035096.20531 454 Sequencing (SRP001817) 420 348 - Arg TCG [SRA]
>SRA1050865 SRR035096.38115 454 Sequencing (SRP001817) 345 273 - Arg TCG [SRA]
>SRA1050952 SRR035096.58420 454 Sequencing (SRP001817) 50 122 + Arg TCG [SRA]
>SRA1051088 SRR035096.83611 454 Sequencing (SRP001817) 214 142 - Arg TCG [SRA]
>SRA1051168 SRR035096.101117 454 Sequencing (SRP001817) 65 137 + Arg TCG [SRA]
>SRA1051199 SRR035096.107402 454 Sequencing (SRP001817) 110 38 - Arg TCG [SRA]
Identical group No.593612 (5 seq.)
>SRA1026853 SRR035086.10614 454 Sequencing (SRP001807) 287 215 - Arg TCG [SRA]
>SRA1027415 SRR035086.121094 454 Sequencing (SRP001807) 132 204 + Arg TCG [SRA]
>SRA1028343 SRR035086.305697 454 Sequencing (SRP001807) 188 116 - Arg TCG [SRA]
>SRA1050924 SRR035096.52775 454 Sequencing (SRP001817) 182 110 - Arg TCG [SRA]
>SRA1051384 SRR035096.164729 454 Sequencing (SRP001817) 270 198 - Arg TCG [SRA]
Identical group No.620470 (1 seq.)
>SRA1051015 SRR035096.69541 454 Sequencing (SRP001817) 387 459 + Arg TCG [SRA]
Identical group No.710462 (3 seq.)
>WENV170599175 FUWD010065754 [FUWD] metagenome; unknown 669 595 - Arg TCG [ENA] ¢þ
>SRA1050931 SRR035096.54062 454 Sequencing (SRP001817) 516 442 - Arg TCG [SRA]
>SRA1053546 SRR035098.434226 454 Sequencing (SRP001819) 121 195 + Arg TCG [SRA]
Identical group No.756619 (1 seq.)
>SRA1051359 SRR035096.151639 454 Sequencing (SRP001817) 500 429 - Arg TCG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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