tRNA genes clustered and arranged according to each identical group

Acid Mine Drainage microbial communities from Richmond mine

Anticodon = CAC

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.488098 (7 seq.)
>A171003622 CP004145 Unclassified Ferroplasma acidarmanus Fer1 [CP004145] 696110 696182 + Val CAC - ¡û
>A171006626 CP015363 Unclassified Ferroplasma acidiphilum Y [CP015363] 1555346 1555418 + Val CAC - ¡û
>W141000044 AADL01001076 Unclassified mine drainage metagenome Group III [AADL] 1745 1673 - Val CAC [ENA] ¡û
>W141000075 AADL01001500 Unclassified mine drainage metagenome Group III [AADL] 41702 41630 - Val CAC [ENA] ¡û
>W1610000065 AABC05000010 Unclassified Ferroplasma acidarmanus fer1 [AABC] 655 727 + Val CAC [ENA] ¡û
>WENV077052 AADL01001076 Acid Mine Drainage microbial communities from Richmond mine 1745 1670 - Val CAC [ENA]
>WENV077083 AADL01001500 Acid Mine Drainage microbial communities from Richmond mine 41702 41627 - Val CAC [ENA]
Identical group No.488115 (5 seq.)
>A171007757 LT671858 Unclassified Cuniculiplasma divulgatum S5(T) [LT671858] 651208 651134 - Val CAC - ¡û
>A171007794 LT719092 Unclassified Cuniculiplasma divulgatum PM4 [LT719092] 649817 649744 - Val CAC - ¡û
>W141000144 AADL01002062 Unclassified mine drainage metagenome Group III [AADL] 2013 2085 + Val CAC [ENA] ¡û
>ENV09002237 ACXJ01011395 Mine drainage metagenome Contig1 11691 11619 - Val CAC [ENA] ¡û
>WENV077152 AADL01002062 Acid Mine Drainage microbial communities from Richmond mine 2013 2088 + Val CAC [ENA]
Identical group No.653328 (12 seq.)
>W1711628723 MPOJ01000017 Nitrospirota Leptospirillum ferriphilum [MPOJ] 173441 173367 - Val CAC [ENA] ¡û
>W1711628749 MPOK01000006 Nitrospirota Leptospirillum ferriphilum [MPOK] 9746 9672 - Val CAC [ENA] ¡û
>W141000200 AADL01002511 Unclassified mine drainage metagenome Group III [AADL] 32816 32890 + Val CAC [ENA] ¡û
>W09106653 AAWO01000067 Unclassified mine drainage metagenome rubarum [AAWO] 29184 29258 + Val CAC [ENA] ¡û
>W141803143 JPGK01000002 Nitrospirota Leptospirillum ferriphilum [JPGK] 263840 263766 - Val CAC [ENA] ¡û
>W1911494731 OBMB01000001 Nitrospirota Leptospirillum ferriphilum [OBMB] 1400674 1400600 - Val CAC [ENA] ¡û
>C151019634 CP007243 Nitrospirota Leptospirillum ferriphilum YSK [CP007243] 2269025 2268951 - Val CAC [Ensembl] ¡û
>C151091669 CP012147 Nitrospirota Leptospirillum sp. Group II 'CF-1' [CP012147] 2640639 2640565 - Val CAC [Ensembl] ¡û
>W1511705755 LGSH01000048 Nitrospirota Leptospirillum ferriphilum Sp-Cl [LGSH] 53725 53799 + Val CAC [ENA] ¡û
>W121055887 AIJM01000007 Unclassified mine drainage metagenome Group II 'C75' [AIJM] 28501 28575 + Val CAC [ENA] ¡û
>WENV076973 AADL01000012 Acid Mine Drainage microbial communities from Richmond mine 2313 2239 - Val CAC [ENA]
>WENV080270 AAWO01000067 Acid Mine Drainage microbial communities from Richmond mine 29184 29258 + Val CAC [ENA]
Identical group No.674639 (9 seq.)
>W141000002 AADL01000192 Unclassified mine drainage metagenome Group III [AADL] 838 764 - Val CAC [ENA] ¡û
>W141085056 AURA01000151 Nitrospirota Leptospirillum sp. Group IV 'UBA BS' [AURA] 2973 3047 + Val CAC [ENA] ¡û
>WENV170013413 AUZX01003338 [AUZX] mine drainage metagenome; uppermost (B1A) sediment-attached strata from acid streamer/mats thriving at Los Rueldos 102 176 + Val CAC [ENA] ¢þ
>W09132215 ACNP01000061 Unclassified mine drainage metagenome ferrodiazotrophum [ACNP] 11829 11903 + Val CAC [ENA] ¡û
>W09132216 ACNP01000062 Unclassified mine drainage metagenome ferrodiazotrophum [ACNP] 490 564 + Val CAC [ENA] ¡û
>ENV09002079 ACXJ01009012 Mine drainage metagenome Contig1 2972 3046 + Val CAC [ENA] ¡û
>C121001317 AP012342 Nitrospirota Leptospirillum ferrooxidans C2-3 [AP012342] 2450112 2450038 - Val CAC [Ensembl] ¡û
>C131001621 CP002919 Nitrospirota Leptospirillum ferriphilum ML-04 [CP002919] 2344587 2344513 - Val CAC [Ensembl] ¡û
>WENV077010 AADL01000192 Acid Mine Drainage microbial communities from Richmond mine 838 764 - Val CAC [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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