tRNA genes clustered and arranged according to each identical group

Acid Mine Drainage microbial communities from Richmond mine

Anticodon = CAT

HIT: 10 Group(s).

Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.245169 (5 seq.)
>A171003636	CP004145	Unclassified	Ferroplasma acidarmanus Fer1 [CP004145]	1129105	1129031	-	Met	CAT	-	○
>A171006640	CP015363	Unclassified	Ferroplasma acidiphilum Y [CP015363]	156681	156607	-	Met	CAT	-	○
>W141000047	AADL01001090	Unclassified	mine drainage metagenome Group III [AADL]	19006	19080	+	Met	CAT	[ENA]	○
>W1610000073	AABC05000011	Unclassified	Ferroplasma acidarmanus fer1 [AABC]	256171	256097	-	Met	CAT	[ENA]	○
>WENV077055	AADL01001090	Acid Mine Drainage microbial communities from Richmond mine		19006	19083	+	Met	CAT	[ENA]
Identical group No.245172 (2 seq.)
>W141000078	AADL01001501	Unclassified	mine drainage metagenome Group III [AADL]	22295	22220	-	Met	CAT	[ENA]	○
>WENV077084	AADL01001501	Acid Mine Drainage microbial communities from Richmond mine		22296	22217	-	Met	CAT	[ENA]
Identical group No.245174 (7 seq.)
>A171007750	LT671858	Unclassified	Cuniculiplasma divulgatum S5(T) [LT671858]	1458879	1458805	-	Met	CAT	-	○
>A171007787	LT719092	Unclassified	Cuniculiplasma divulgatum PM4 [LT719092]	1453056	1452982	-	Met	CAT	-	○
>W141000100	AADL01001607	Unclassified	mine drainage metagenome Group III [AADL]	439	365	-	Met	CAT	[ENA]	○
>WENV170013420	AUZX01003852	[AUZX] mine drainage metagenome; uppermost (B1A) sediment-attached strata from acid streamer/mats thriving at Los Rueldos		66	140	+	Met	CAT	[ENA]	◯
>ENV09002207	ACXJ01011195	Mine drainage metagenome Contig1		9373	9299	-	Met	CAT	[ENA]	○
>ENV09002328	ACXL01000016	Thermoplasmatales archaeon E-plasma EplasmaContig2057		39363	39289	-	Met	CAT	[ENA]	○
>WENV077107	AADL01001607	Acid Mine Drainage microbial communities from Richmond mine		439	362	-	Met	CAT	[ENA]
Identical group No.270524 (13 seq.)
>W1711628733	MPOJ01000030	Nitrospirota	Leptospirillum ferriphilum [MPOJ]	1733	1657	-	Met	CAT	[ENA]	○
>W1711628748	MPOK01000005	Nitrospirota	Leptospirillum ferriphilum [MPOK]	1711	1635	-	Met	CAT	[ENA]	○
>W141000195	AADL01002506	Unclassified	mine drainage metagenome Group III [AADL]	36112	36188	+	Met	CAT	[ENA]	○
>W141803141	JPGK01000001	Nitrospirota	Leptospirillum ferriphilum [JPGK]	123031	122955	-	Met	CAT	[ENA]	○
>W09106650	AAWO01000061	Unclassified	mine drainage metagenome rubarum [AAWO]	900	976	+	Met	CAT	[ENA]	○
>W1911494730	OBMB01000001	Nitrospirota	Leptospirillum ferriphilum [OBMB]	1603769	1603693	-	Met	CAT	[ENA]	○
>C151019658	CP007243	Nitrospirota	Leptospirillum ferriphilum YSK [CP007243]	161073	160997	-	Met	CAT	[Ensembl]	○
>C151091689	CP012147	Nitrospirota	Leptospirillum sp. Group II 'CF-1' [CP012147]	168186	168110	-	Met	CAT	[Ensembl]	○
>W1511705750	LGSH01000044	Nitrospirota	Leptospirillum ferriphilum Sp-Cl [LGSH]	37815	37891	+	Met	CAT	[ENA]	○
>W121055905	AIJM01000050	Unclassified	mine drainage metagenome Group II 'C75' [AIJM]	50	126	+	Met	CAT	[ENA]	○
>C131001645	CP002919	Nitrospirota	Leptospirillum ferriphilum ML-04 [CP002919]	155933	155857	-	Met	CAT	[Ensembl]	○
>WENV076990	AADL01000050	Acid Mine Drainage microbial communities from Richmond mine		2878	2802	-	Met	CAT	[ENA]
>WENV080267	AAWO01000061	Acid Mine Drainage microbial communities from Richmond mine		900	976	+	Met	CAT	[ENA]
Identical group No.304167 (2 seq.)
>W141000013	AADL01000416	Unclassified	mine drainage metagenome Group III [AADL]	1954	1878	-	Met	CAT	[ENA]	○
>WENV077021	AADL01000416	Acid Mine Drainage microbial communities from Richmond mine		1954	1878	-	Met	CAT	[ENA]
Identical group No.304172 (18 seq.)
>A171003641	CP004145	Unclassified	Ferroplasma acidarmanus Fer1 [CP004145]	624622	624548	-	Met	CAT	-	○
>A171006633	CP015363	Unclassified	Ferroplasma acidiphilum Y [CP015363]	1489065	1488991	-	Met	CAT	-	○
>W141000049	AADL01001092	Unclassified	mine drainage metagenome Group III [AADL]	8575	8649	+	Met	CAT	[ENA]	○
>W141000133	AADL01001881	Unclassified	mine drainage metagenome Group III [AADL]	1094	1021	-	Met	CAT	[ENA]	○
>W141000157	AADL01002346	Unclassified	mine drainage metagenome Group III [AADL]	595	668	+	Met	CAT	[ENA]	○
>W141000158	AADL01002367	Unclassified	mine drainage metagenome Group III [AADL]	942	869	-	Met	CAT	[ENA]	○
>At1764	AE017261	Unclassified	Picrophilus oshimae DSM 9789 DSM 9790 [AE017261]	780891	780818	-	Met	CAT	[Ensembl]	○
>W1910469080	FWYE01000001	Unclassified	Picrophilus oshimae DSM 9789 [FWYE]	195974	196047	+	Met	CAT	[ENA]	○
>W1910585077	JYHS01000002	Unclassified	Acidiplasma sp. MBA-1 [JYHS]	232415	232488	+	Met	CAT	[ENA]	○
>W1610000064	AABC05000009	Unclassified	Ferroplasma acidarmanus fer1 [AABC]	161780	161706	-	Met	CAT	[ENA]	○
>W1610047595	BBDK01000021	Unclassified	Acidiplasma cupricumulans JCM 13668 [BBDK]	19809	19882	+	Met	CAT	[ENA]	○
>W1610642309	LJCQ01000275	Unclassified	Acidiplasma aeolicum V [LJCQ]	27773	27846	+	Met	CAT	[ENA]	○
>W1610670466	LKBG01000233	Unclassified	Acidiplasma aeolicum VT [LKBG]	1534	1607	+	Met	CAT	[ENA]	○
>W1610670488	LKBH01000015	Unclassified	Acidiplasma cupricumulans BH2 [LKBH]	17827	17754	-	Met	CAT	[ENA]	○
>WENV077057	AADL01001092	Acid Mine Drainage microbial communities from Richmond mine		8574	8652	+	Met	CAT	[ENA]
>WENV077140	AADL01001881	Acid Mine Drainage microbial communities from Richmond mine		1094	1018	-	Met	CAT	[ENA]
>WENV077165	AADL01002346	Acid Mine Drainage microbial communities from Richmond mine		595	671	+	Met	CAT	[ENA]
>WENV077166	AADL01002367	Acid Mine Drainage microbial communities from Richmond mine		942	866	-	Met	CAT	[ENA]
Identical group No.304180 (5 seq.)
>A171007741	LT671858	Unclassified	Cuniculiplasma divulgatum S5(T) [LT671858]	1194541	1194614	+	Met	CAT	-	○
>A171007778	LT719092	Unclassified	Cuniculiplasma divulgatum PM4 [LT719092]	1197159	1197232	+	Met	CAT	-	○
>W141000128	AADL01001785	Unclassified	mine drainage metagenome Group III [AADL]	1114	1041	-	Met	CAT	[ENA]	○
>ENV09002219	ACXJ01011277	Mine drainage metagenome Contig1		668	741	+	Met	CAT	[ENA]	○
>WENV077135	AADL01001785	Acid Mine Drainage microbial communities from Richmond mine		1114	1038	-	Met	CAT	[ENA]
Identical group No.451491 (2 seq.)
>W09106626	AAWO01000014	Unclassified	mine drainage metagenome rubarum [AAWO]	1106	1031	-	Met	CAT	[ENA]	○
>WENV080243	AAWO01000014	Acid Mine Drainage microbial communities from Richmond mine		1106	1031	-	Met	CAT	[ENA]
Identical group No.451492 (21 seq.)
>W1711628709	MPOJ01000010	Nitrospirota	Leptospirillum ferriphilum [MPOJ]	180645	180720	+	Met	CAT	[ENA]	○
>W1711628774	MPOK01000072	Nitrospirota	Leptospirillum ferriphilum [MPOK]	6913	6988	+	Met	CAT	[ENA]	○
>W141000008	AADL01000276	Unclassified	mine drainage metagenome Group III [AADL]	846	921	+	Met	CAT	[ENA]	○
>W141000012	AADL01000400	Unclassified	mine drainage metagenome Group III [AADL]	88	163	+	Met	CAT	[ENA]	○
>W141000027	AADL01000674	Unclassified	mine drainage metagenome Group III [AADL]	495	570	+	Met	CAT	[ENA]	○
>W141000160	AADL01002456	Unclassified	mine drainage metagenome Group III [AADL]	13164	13089	-	Met	CAT	[ENA]	○
>W141000161	AADL01002457	Unclassified	mine drainage metagenome Group III [AADL]	55	130	+	Met	CAT	[ENA]	○
>WENV181296418	OFHJ01034245	[OFHJ] soil metagenome; Clay		39	114	+	Met	CAT	[ENA]	◯
>W141803146	JPGK01000003	Nitrospirota	Leptospirillum ferriphilum [JPGK]	21109	21184	+	Met	CAT	[ENA]	○
>W09106625	AAWO01000013	Unclassified	mine drainage metagenome rubarum [AAWO]	6776	6701	-	Met	CAT	[ENA]	○
>W1911494716	OBMB01000001	Nitrospirota	Leptospirillum ferriphilum [OBMB]	1878664	1878739	+	Met	CAT	[ENA]	○
>C151091650	CP012147	Nitrospirota	Leptospirillum sp. Group II 'CF-1' [CP012147]	560865	560940	+	Met	CAT	[Ensembl]	○
>ENV09001965	ACXJ01001897	Mine drainage metagenome Contig1		254	329	+	Met	CAT	[ENA]	○
>ENV09002182	ACXJ01010920	Mine drainage metagenome Contig1		5302	5227	-	Met	CAT	[ENA]	○
>ENV09002210	ACXJ01011247	Mine drainage metagenome Contig1		3302	3227	-	Met	CAT	[ENA]	○
>W121055893	AIJM01000013	Unclassified	mine drainage metagenome Group II 'C75' [AIJM]	9296	9221	-	Met	CAT	[ENA]	○
>C131001606	CP002919	Nitrospirota	Leptospirillum ferriphilum ML-04 [CP002919]	450053	450128	+	Met	CAT	[Ensembl]	○
>WENV077016	AADL01000276	Acid Mine Drainage microbial communities from Richmond mine		846	921	+	Met	CAT	[ENA]
>WENV077020	AADL01000400	Acid Mine Drainage microbial communities from Richmond mine		88	163	+	Met	CAT	[ENA]
>WENV077035	AADL01000674	Acid Mine Drainage microbial communities from Richmond mine		495	570	+	Met	CAT	[ENA]
>WENV080242	AAWO01000013	Acid Mine Drainage microbial communities from Richmond mine		6776	6701	-	Met	CAT	[ENA]
Identical group No.653401 (14 seq.)
>W1711628728	MPOJ01000029	Nitrospirota	Leptospirillum ferriphilum [MPOJ]	46135	46209	+	Met	CAT	[ENA]	○
>W1711628750	MPOK01000008	Nitrospirota	Leptospirillum ferriphilum [MPOK]	46111	46185	+	Met	CAT	[ENA]	○
>W141000003	AADL01000212	Unclassified	mine drainage metagenome Group III [AADL]	3951	4025	+	Met	CAT	[ENA]	○
>W141000203	AADL01002515	Unclassified	mine drainage metagenome Group III [AADL]	17030	17104	+	Met	CAT	[ENA]	○
>W141803145	JPGK01000002	Nitrospirota	Leptospirillum ferriphilum [JPGK]	37028	36954	-	Met	CAT	[ENA]	○
>W09106637	AAWO01000052	Unclassified	mine drainage metagenome rubarum [AAWO]	4596	4522	-	Met	CAT	[ENA]	○
>W1911494733	OBMB01000001	Nitrospirota	Leptospirillum ferriphilum [OBMB]	1173862	1173788	-	Met	CAT	[ENA]	○
>C151019636	CP007243	Nitrospirota	Leptospirillum ferriphilum YSK [CP007243]	2049486	2049412	-	Met	CAT	[Ensembl]	○
>C151091671	CP012147	Nitrospirota	Leptospirillum sp. Group II 'CF-1' [CP012147]	2400807	2400733	-	Met	CAT	[Ensembl]	○
>W1511705758	LGSH01000055	Nitrospirota	Leptospirillum ferriphilum Sp-Cl [LGSH]	25331	25405	+	Met	CAT	[ENA]	○
>W121055903	AIJM01000040	Unclassified	mine drainage metagenome Group II 'C75' [AIJM]	51725	51799	+	Met	CAT	[ENA]	○
>C131001623	CP002919	Nitrospirota	Leptospirillum ferriphilum ML-04 [CP002919]	2099781	2099707	-	Met	CAT	[Ensembl]	○
>WENV077011	AADL01000212	Acid Mine Drainage microbial communities from Richmond mine		3951	4025	+	Met	CAT	[ENA]
>WENV080254	AAWO01000052	Acid Mine Drainage microbial communities from Richmond mine		4596	4522	-	Met	CAT	[ENA]