tRNA genes clustered and arranged according to each identical group

Acid Mine Drainage microbial communities from Richmond mine

Anticodon = CGC

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.451320 (17 seq.)
>W1711628703 MPOJ01000006 Nitrospirota Leptospirillum ferriphilum [MPOJ] 9923 9848 - Ala CGC [ENA] ¡û
>W1711628777 MPOK01000079 Nitrospirota Leptospirillum ferriphilum [MPOK] 6699 6624 - Ala CGC [ENA] ¡û
>W141000006 AADL01000254 Unclassified mine drainage metagenome Group III [AADL] 269 194 - Ala CGC [ENA] ¡û
>W141000204 AADL01002518 Unclassified mine drainage metagenome Group III [AADL] 67053 67128 + Ala CGC [ENA] ¡û
>W09106636 AAWO01000047 Unclassified mine drainage metagenome rubarum [AAWO] 6747 6672 - Ala CGC [ENA] ¡û
>W141803155 JPGK01000004 Nitrospirota Leptospirillum ferriphilum [JPGK] 185520 185445 - Ala CGC [ENA] ¡û
>W09132229 ACNP01000077 Unclassified mine drainage metagenome ferrodiazotrophum [ACNP] 30465 30540 + Ala CGC [ENA] ¡û
>W1911494734 OBMB01000001 Nitrospirota Leptospirillum ferriphilum [OBMB] 1078880 1078805 - Ala CGC [ENA] ¡û
>C151019637 CP007243 Nitrospirota Leptospirillum ferriphilum YSK [CP007243] 1949855 1949780 - Ala CGC [Ensembl] ¡û
>C151091672 CP012147 Nitrospirota Leptospirillum sp. Group II 'CF-1' [CP012147] 2273747 2273672 - Ala CGC [Ensembl] ¡û
>ENV09002256 ACXJ01012150 Mine drainage metagenome Contig1 511 436 - Ala CGC [ENA] ¡û
>W1511705759 LGSH01000056 Nitrospirota Leptospirillum ferriphilum Sp-Cl [LGSH] 49473 49548 + Ala CGC [ENA] ¡û
>W121055884 AIJM01000005 Unclassified mine drainage metagenome Group II 'C75' [AIJM] 56553 56628 + Ala CGC [ENA] ¡û
>C131001624 CP002919 Nitrospirota Leptospirillum ferriphilum ML-04 [CP002919] 2018579 2018504 - Ala CGC [Ensembl] ¡û
>WENV077008 AADL01000103 Acid Mine Drainage microbial communities from Richmond mine 1726 1651 - Ala CGC [ENA]
>WENV077014 AADL01000254 Acid Mine Drainage microbial communities from Richmond mine 270 193 - Ala CGC [ENA]
>WENV080251 AAWO01000047 Acid Mine Drainage microbial communities from Richmond mine 6747 6672 - Ala CGC [ENA]
Identical group No.674645 (15 seq.)
>W141000038 AADL01000962 Unclassified mine drainage metagenome Group III [AADL] 757 686 - Ala CGC [ENA] ¡û
>W141000058 AADL01001279 Unclassified mine drainage metagenome Group III [AADL] 411 340 - Ala CGC [ENA] ¡û
>W141000087 AADL01001520 Unclassified mine drainage metagenome Group III [AADL] 26675 26746 + Ala CGC [ENA] ¡û
>W141000148 AADL01002121 Unclassified mine drainage metagenome Group III [AADL] 290 361 + Ala CGC [ENA] ¡û
>W141000151 AADL01002189 Unclassified mine drainage metagenome Group III [AADL] 641 712 + Ala CGC [ENA] ¡û
>W1910585094 JYHS01000003 Unclassified Acidiplasma sp. MBA-1 [JYHS] 66669 66598 - Ala CGC [ENA] ¡û
>W1610047584 BBDK01000003 Unclassified Acidiplasma cupricumulans JCM 13668 [BBDK] 36289 36218 - Ala CGC [ENA] ¡û
>W1610642295 LJCQ01000144 Unclassified Acidiplasma aeolicum V [LJCQ] 1527 1598 + Ala CGC [ENA] ¡û
>W1610670473 LKBG01000242 Unclassified Acidiplasma aeolicum VT [LKBG] 1778 1849 + Ala CGC [ENA] ¡û
>W1610670503 LKBH01000181 Unclassified Acidiplasma cupricumulans BH2 [LKBH] 26424 26353 - Ala CGC [ENA] ¡û
>WENV077046 AADL01000962 Acid Mine Drainage microbial communities from Richmond mine 757 683 - Ala CGC [ENA]
>WENV077066 AADL01001279 Acid Mine Drainage microbial communities from Richmond mine 411 337 - Ala CGC [ENA]
>WENV077095 AADL01001520 Acid Mine Drainage microbial communities from Richmond mine 26675 26749 + Ala CGC [ENA]
>WENV077156 AADL01002121 Acid Mine Drainage microbial communities from Richmond mine 290 364 + Ala CGC [ENA]
>WENV077159 AADL01002189 Acid Mine Drainage microbial communities from Richmond mine 641 715 + Ala CGC [ENA]
Identical group No.674650 (4 seq.)
>A171007745 LT671858 Unclassified Cuniculiplasma divulgatum S5(T) [LT671858] 1711435 1711506 + Ala CGC - ¡û
>A171007782 LT719092 Unclassified Cuniculiplasma divulgatum PM4 [LT719092] 1678840 1678911 + Ala CGC - ¡û
>W141000138 AADL01001958 Unclassified mine drainage metagenome Group III [AADL] 3707 3778 + Ala CGC [ENA] ¡û
>WENV077146 AADL01001958 Acid Mine Drainage microbial communities from Richmond mine 3707 3781 + Ala CGC [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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