tRNA genes clustered and arranged according to each identical group

Acid Mine Drainage microbial communities from Richmond mine

Anticodon = GAA

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.451323 (14 seq.)
>W1711628726 MPOJ01000019 Nitrospirota Leptospirillum ferriphilum [MPOJ] 22415 22340 - Phe GAA [ENA] ¡û
>W1711628760 MPOK01000034 Nitrospirota Leptospirillum ferriphilum [MPOK] 8725 8800 + Phe GAA [ENA] ¡û
>W141000174 AADL01002492 Unclassified mine drainage metagenome Group III [AADL] 170086 170161 + Phe GAA [ENA] ¡û
>W09106656 AAWO01000075 Unclassified mine drainage metagenome rubarum [AAWO] 20827 20752 - Phe GAA [ENA] ¡û
>W141803162 JPGK01000006 Nitrospirota Leptospirillum ferriphilum [JPGK] 30556 30481 - Phe GAA [ENA] ¡û
>W1911494746 OBMB01000001 Nitrospirota Leptospirillum ferriphilum [OBMB] 198443 198368 - Phe GAA [ENA] ¡û
>C151019649 CP007243 Nitrospirota Leptospirillum ferriphilum YSK [CP007243] 1083712 1083637 - Phe GAA [Ensembl] ¡û
>C151091661 CP012147 Nitrospirota Leptospirillum sp. Group II 'CF-1' [CP012147] 1454559 1454634 + Phe GAA [Ensembl] ¡û
>W1511705765 LGSH01000065 Nitrospirota Leptospirillum ferriphilum Sp-Cl [LGSH] 47738 47663 - Phe GAA [ENA] ¡û
>C121001312 AP012342 Nitrospirota Leptospirillum ferrooxidans C2-3 [AP012342] 1465151 1465226 + Phe GAA [Ensembl] ¡û
>W121055920 AIJM01000074 Unclassified mine drainage metagenome Group II 'C75' [AIJM] 146 221 + Phe GAA [ENA] ¡û
>C131001636 CP002919 Nitrospirota Leptospirillum ferriphilum ML-04 [CP002919] 1149277 1149202 - Phe GAA [Ensembl] ¡û
>WENV076972 AADL01000009 Acid Mine Drainage microbial communities from Richmond mine 22765 22840 + Phe GAA [ENA]
>WENV080273 AAWO01000075 Acid Mine Drainage microbial communities from Richmond mine 20827 20752 - Phe GAA [ENA]
Identical group No.488095 (3 seq.)
>W141000035 AADL01000829 Unclassified mine drainage metagenome Group III [AADL] 1289 1364 + Phe GAA [ENA] ¡û
>W09132242 ACNP01000128 Unclassified mine drainage metagenome ferrodiazotrophum [ACNP] 36467 36542 + Phe GAA [ENA] ¡û
>WENV077043 AADL01000829 Acid Mine Drainage microbial communities from Richmond mine 1288 1365 + Phe GAA [ENA]
Identical group No.488104 (26 seq.)
>A171003624 CP004145 Unclassified Ferroplasma acidarmanus Fer1 [CP004145] 938373 938445 + Phe GAA - ¡û
>A171006628 CP015363 Unclassified Ferroplasma acidiphilum Y [CP015363] 1798418 1798490 + Phe GAA - ¡û
>A171007761 LT671858 Unclassified Cuniculiplasma divulgatum S5(T) [LT671858] 279047 278975 - Phe GAA - ¡û
>A171007798 LT719092 Unclassified Cuniculiplasma divulgatum PM4 [LT719092] 261764 261692 - Phe GAA - ¡û
>W141000060 AADL01001298 Unclassified mine drainage metagenome Group III [AADL] 893 965 + Phe GAA [ENA] ¡û
>W141000096 AADL01001573 Unclassified mine drainage metagenome Group III [AADL] 9947 9875 - Phe GAA [ENA] ¡û
>W141000110 AADL01001643 Unclassified mine drainage metagenome Group III [AADL] 3432 3504 + Phe GAA [ENA] ¡û
>W141000152 AADL01002191 Unclassified mine drainage metagenome Group III [AADL] 297 369 + Phe GAA [ENA] ¡û
>WENV170013460 AUZX01008961 [AUZX] mine drainage metagenome; uppermost (B1A) sediment-attached strata from acid streamer/mats thriving at Los Rueldos 248 176 - Phe GAA [ENA] ¢þ
>At1756 AE017261 Unclassified Picrophilus oshimae DSM 9789 DSM 9790 [AE017261] 490564 490492 - Phe GAA [Ensembl] ¡û
>W1910469086 FWYE01000001 Unclassified Picrophilus oshimae DSM 9789 [FWYE] 481679 481751 + Phe GAA [ENA] ¡û
>W1910585091 JYHS01000003 Unclassified Acidiplasma sp. MBA-1 [JYHS] 224436 224364 - Phe GAA [ENA] ¡û
>ENV09002000 ACXJ01005576 Mine drainage metagenome Contig1 298 370 + Phe GAA [ENA] ¡û
>ENV09002138 ACXJ01010336 Mine drainage metagenome Contig1 3148 3076 - Phe GAA [ENA] ¡û
>ENV09002152 ACXJ01010552 Mine drainage metagenome Contig1 1404 1332 - Phe GAA [ENA] ¡û
>ENV09002229 ACXJ01011367 Mine drainage metagenome Contig1 3220 3292 + Phe GAA [ENA] ¡û
>ENV09002314 ACXL01000009 Thermoplasmatales archaeon E-plasma EplasmaContig2057 78818 78746 - Phe GAA [ENA] ¡û
>W1610000068 AABC05000011 Unclassified Ferroplasma acidarmanus fer1 [AABC] 65439 65511 + Phe GAA [ENA] ¡û
>W1610047589 BBDK01000010 Unclassified Acidiplasma cupricumulans JCM 13668 [BBDK] 6254 6182 - Phe GAA [ENA] ¡û
>W1610642306 LJCQ01000236 Unclassified Acidiplasma aeolicum V [LJCQ] 4201 4273 + Phe GAA [ENA] ¡û
>W1610670462 LKBG01000112 Unclassified Acidiplasma aeolicum VT [LKBG] 479 407 - Phe GAA [ENA] ¡û
>W1610670507 LKBH01000203 Unclassified Acidiplasma cupricumulans BH2 [LKBH] 779 707 - Phe GAA [ENA] ¡û
>WENV077068 AADL01001298 Acid Mine Drainage microbial communities from Richmond mine 893 968 + Phe GAA [ENA]
>WENV077105 AADL01001573 Acid Mine Drainage microbial communities from Richmond mine 9947 9872 - Phe GAA [ENA]
>WENV077118 AADL01001643 Acid Mine Drainage microbial communities from Richmond mine 3432 3507 + Phe GAA [ENA]
>WENV077160 AADL01002191 Acid Mine Drainage microbial communities from Richmond mine 297 372 + Phe GAA [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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