tRNA genes clustered and arranged according to each identical group

Acid Mine Drainage microbial communities from Richmond mine

Anticodon = GAT

HIT: 5 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.245173 (6 seq.)
>W141000086 AADL01001518 Unclassified mine drainage metagenome Group III [AADL] 5226 5152 - Ile GAT [ENA] ¡û
>W141000136 AADL01001913 Unclassified mine drainage metagenome Group III [AADL] 587 661 + Ile GAT [ENA] ¡û
>W141000155 AADL01002291 Unclassified mine drainage metagenome Group III [AADL] 3059 3133 + Ile GAT [ENA] ¡û
>WENV077094 AADL01001518 Acid Mine Drainage microbial communities from Richmond mine 5226 5149 - Ile GAT [ENA]
>WENV077144 AADL01001913 Acid Mine Drainage microbial communities from Richmond mine 587 664 + Ile GAT [ENA]
>WENV077163 AADL01002291 Acid Mine Drainage microbial communities from Richmond mine 3059 3136 + Ile GAT [ENA]
Identical group No.245176 (5 seq.)
>A171007727 LT671858 Unclassified Cuniculiplasma divulgatum S5(T) [LT671858] 243735 243809 + Ile GAT - ¡û
>A171007764 LT719092 Unclassified Cuniculiplasma divulgatum PM4 [LT719092] 222990 223064 + Ile GAT - ¡û
>W141000108 AADL01001640 Unclassified mine drainage metagenome Group III [AADL] 7773 7696 - Ile GAT [ENA] ¡û
>ENV09002211 ACXJ01011262 Mine drainage metagenome Contig1 8812 8735 - Ile GAT [ENA] ¡û
>WENV077116 AADL01001640 Acid Mine Drainage microbial communities from Richmond mine 7773 7696 - Ile GAT [ENA]
Identical group No.245177 (10 seq.)
>A171003619 CP004145 Unclassified Ferroplasma acidarmanus Fer1 [CP004145] 477508 477582 + Ile GAT - ¡û
>A171006623 CP015363 Unclassified Ferroplasma acidiphilum Y [CP015363] 1369792 1369866 + Ile GAT - ¡û
>W141000113 AADL01001652 Unclassified mine drainage metagenome Group III [AADL] 5938 6012 + Ile GAT [ENA] ¡û
>W1910585065 JYHS01000001 Unclassified Acidiplasma sp. MBA-1 [JYHS] 343617 343691 + Ile GAT [ENA] ¡û
>W1610000059 AABC05000009 Unclassified Ferroplasma acidarmanus fer1 [AABC] 14656 14730 + Ile GAT [ENA] ¡û
>W1610047600 BBDK01000031 Unclassified Acidiplasma cupricumulans JCM 13668 [BBDK] 5450 5376 - Ile GAT [ENA] ¡û
>W1610642302 LJCQ01000179 Unclassified Acidiplasma aeolicum V [LJCQ] 7137 7063 - Ile GAT [ENA] ¡û
>W1610670455 LKBG01000078 Unclassified Acidiplasma aeolicum VT [LKBG] 11875 11949 + Ile GAT [ENA] ¡û
>W1610670493 LKBH01000066 Unclassified Acidiplasma cupricumulans BH2 [LKBH] 1010 936 - Ile GAT [ENA] ¡û
>WENV077121 AADL01001652 Acid Mine Drainage microbial communities from Richmond mine 5938 6015 + Ile GAT [ENA]
Identical group No.270372 (21 seq.)
>W1711628695 MPOJ01000003 Nitrospirota Leptospirillum ferriphilum [MPOJ] 27087 27163 + Ile GAT [ENA] ¡û
>W1711628756 MPOK01000021 Nitrospirota Leptospirillum ferriphilum [MPOK] 27081 27157 + Ile GAT [ENA] ¡û
>W141000184 AADL01002504 Unclassified mine drainage metagenome Group III [AADL] 1862 1938 + Ile GAT [ENA] ¡û
>W141000186 AADL01002504 Unclassified mine drainage metagenome Group III [AADL] 73329 73253 - Ile GAT [ENA] ¡û
>W09106639 AAWO01000056 Unclassified mine drainage metagenome rubarum [AAWO] 13080 13004 - Ile GAT [ENA] ¡û
>W1911494701 OBMB01000001 Nitrospirota Leptospirillum ferriphilum [OBMB] 368229 368305 + Ile GAT [ENA] ¡û
>W1911494743 OBMB01000001 Nitrospirota Leptospirillum ferriphilum [OBMB] 439807 439731 - Ile GAT [ENA] ¡û
>C151019626 CP007243 Nitrospirota Leptospirillum ferriphilum YSK [CP007243] 1230785 1230861 + Ile GAT [Ensembl] ¡û
>C151019646 CP007243 Nitrospirota Leptospirillum ferriphilum YSK [CP007243] 1301087 1301011 - Ile GAT [Ensembl] ¡û
>C151091658 CP012147 Nitrospirota Leptospirillum sp. Group II 'CF-1' [CP012147] 1165010 1165086 + Ile GAT [Ensembl] ¡û
>C151091680 CP012147 Nitrospirota Leptospirillum sp. Group II 'CF-1' [CP012147] 1239510 1239434 - Ile GAT [Ensembl] ¡û
>W1511705732 LGSH01000013 Nitrospirota Leptospirillum ferriphilum Sp-Cl [LGSH] 1922 1998 + Ile GAT [ENA] ¡û
>C121001305 AP012342 Nitrospirota Leptospirillum ferrooxidans C2-3 [AP012342] 1060223 1060299 + Ile GAT [Ensembl] ¡û
>C121001307 AP012342 Nitrospirota Leptospirillum ferrooxidans C2-3 [AP012342] 1068832 1068908 + Ile GAT [Ensembl] ¡û
>C121001310 AP012342 Nitrospirota Leptospirillum ferrooxidans C2-3 [AP012342] 1215666 1215742 + Ile GAT [Ensembl] ¡û
>W121055891 AIJM01000012 Unclassified mine drainage metagenome Group II 'C75' [AIJM] 16966 17042 + Ile GAT [ENA] ¡û
>W121055912 AIJM01000065 Unclassified mine drainage metagenome Group II 'C75' [AIJM] 32129 32205 + Ile GAT [ENA] ¡û
>C131001613 CP002919 Nitrospirota Leptospirillum ferriphilum ML-04 [CP002919] 1295822 1295898 + Ile GAT [Ensembl] ¡û
>C131001633 CP002919 Nitrospirota Leptospirillum ferriphilum ML-04 [CP002919] 1366170 1366094 - Ile GAT [Ensembl] ¡û
>WENV076999 AADL01000078 Acid Mine Drainage microbial communities from Richmond mine 2286 2208 - Ile GAT [ENA]
>WENV080256 AAWO01000056 Acid Mine Drainage microbial communities from Richmond mine 13081 13003 - Ile GAT [ENA]
Identical group No.304169 (7 seq.)
>W141000019 AADL01000473 Unclassified mine drainage metagenome Group III [AADL] 2308 2232 - Ile GAT [ENA] ¡û
>W141085067 AURA01000402 Nitrospirota Leptospirillum sp. Group IV 'UBA BS' [AURA] 1130 1206 + Ile GAT [ENA] ¡û
>WENV170013494 AUZX01012147 [AUZX] mine drainage metagenome; uppermost (B1A) sediment-attached strata from acid streamer/mats thriving at Los Rueldos 70 146 + Ile GAT [ENA] ¢þ
>W09132217 ACNP01000064 Unclassified mine drainage metagenome ferrodiazotrophum [ACNP] 20719 20643 - Ile GAT [ENA] ¡û
>ENV09002018 ACXJ01006897 Mine drainage metagenome Contig1 393 469 + Ile GAT [ENA] ¡û
>ENV09002165 ACXJ01010641 Mine drainage metagenome Contig1 1132 1208 + Ile GAT [ENA] ¡û
>WENV077028 AADL01000473 Acid Mine Drainage microbial communities from Richmond mine 2308 2232 - Ile GAT [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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