tRNA genes clustered and arranged according to each identical group

Acid Mine Drainage microbial communities from Richmond mine

Anticodon = GGA

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.12230 (13 seq.)
>W1711628731 MPOJ01000030 Nitrospirota Leptospirillum ferriphilum [MPOJ] 19493 19401 - Ser GGA [ENA] ¡û
>W1711628746 MPOK01000005 Nitrospirota Leptospirillum ferriphilum [MPOK] 19467 19375 - Ser GGA [ENA] ¡û
>W141000193 AADL01002506 Unclassified mine drainage metagenome Group III [AADL] 18280 18372 + Ser GGA [ENA] ¡û
>W09106646 AAWO01000060 Unclassified mine drainage metagenome rubarum [AAWO] 56323 56415 + Ser GGA [ENA] ¡û
>W141803139 JPGK01000001 Nitrospirota Leptospirillum ferriphilum [JPGK] 140863 140771 - Ser GGA [ENA] ¡û
>W1911494728 OBMB01000001 Nitrospirota Leptospirillum ferriphilum [OBMB] 1621601 1621509 - Ser GGA [ENA] ¡û
>C151019656 CP007243 Nitrospirota Leptospirillum ferriphilum YSK [CP007243] 178828 178736 - Ser GGA [Ensembl] ¡û
>C151091687 CP012147 Nitrospirota Leptospirillum sp. Group II 'CF-1' [CP012147] 187469 187377 - Ser GGA [Ensembl] ¡û
>W1511705748 LGSH01000041 Nitrospirota Leptospirillum ferriphilum Sp-Cl [LGSH] 22087 22179 + Ser GGA [ENA] ¡û
>W121055916 AIJM01000073 Unclassified mine drainage metagenome Group II 'C75' [AIJM] 799 891 + Ser GGA [ENA] ¡û
>C131001643 CP002919 Nitrospirota Leptospirillum ferriphilum ML-04 [CP002919] 173689 173597 - Ser GGA [Ensembl] ¡û
>WENV076994 AADL01000050 Acid Mine Drainage microbial communities from Richmond mine 20711 20617 - Ser GGA [ENA]
>WENV080263 AAWO01000060 Acid Mine Drainage microbial communities from Richmond mine 56322 56416 + Ser GGA [ENA]
Identical group No.13635 (4 seq.)
>W141000004 AADL01000228 Unclassified mine drainage metagenome Group III [AADL] 5239 5147 - Ser GGA [ENA] ¡û
>W09132212 ACNP01000058 Unclassified mine drainage metagenome ferrodiazotrophum [ACNP] 6333 6425 + Ser GGA [ENA] ¡û
>ENV09002241 ACXJ01011403 Mine drainage metagenome Contig1 8597 8505 - Ser GGA [ENA] ¡û
>WENV077012 AADL01000228 Acid Mine Drainage microbial communities from Richmond mine 5240 5146 - Ser GGA [ENA]
Identical group No.119158 (7 seq.)
>A171003630 CP004145 Unclassified Ferroplasma acidarmanus Fer1 [CP004145] 1793026 1793110 + Ser GGA - ¡û
>A171006618 CP015363 Unclassified Ferroplasma acidiphilum Y [CP015363] 754596 754680 + Ser GGA - ¡û
>W141000051 AADL01001102 Unclassified mine drainage metagenome Group III [AADL] 2857 2941 + Ser GGA [ENA] ¡û
>W141000083 AADL01001503 Unclassified mine drainage metagenome Group III [AADL] 21561 21645 + Ser GGA [ENA] ¡û
>W1610000081 AABC05000015 Unclassified Ferroplasma acidarmanus fer1 [AABC] 56622 56706 + Ser GGA [ENA] ¡û
>WENV077059 AADL01001102 Acid Mine Drainage microbial communities from Richmond mine 2857 2943 + Ser GGA [ENA]
>WENV077092 AADL01001503 Acid Mine Drainage microbial communities from Richmond mine 21561 21647 + Ser GGA [ENA]
Identical group No.158040 (4 seq.)
>A171007748 LT671858 Unclassified Cuniculiplasma divulgatum S5(T) [LT671858] 1813568 1813485 - Ser GGA - ¡û
>A171007785 LT719092 Unclassified Cuniculiplasma divulgatum PM4 [LT719092] 1758366 1758283 - Ser GGA - ¡û
>W141000115 AADL01001671 Unclassified mine drainage metagenome Group III [AADL] 1663 1580 - Ser GGA [ENA] ¡û
>WENV077123 AADL01001671 Acid Mine Drainage microbial communities from Richmond mine 1663 1578 - Ser GGA [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK