tRNA genes clustered and arranged according to each identical group

Acid Mine Drainage microbial communities from Richmond mine

Anticodon = GGC

HIT: 2 Group(s).
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.451316 (16 seq.)
>W1711628705 MPOJ01000009 Nitrospirota Leptospirillum ferriphilum [MPOJ] 26704 26629 - Ala GGC [ENA] ¡û
>W1711628763 MPOK01000062 Nitrospirota Leptospirillum ferriphilum [MPOK] 28055 28130 + Ala GGC [ENA] ¡û
>W141000031 AADL01000760 Unclassified mine drainage metagenome Group III [AADL] 448 373 - Ala GGC [ENA] ¡û
>W141000166 AADL01002462 Unclassified mine drainage metagenome Group III [AADL] 83832 83757 - Ala GGC [ENA] ¡û
>W09106619 AAWO01000003 Unclassified mine drainage metagenome rubarum [AAWO] 178414 178339 - Ala GGC [ENA] ¡û
>W141803147 JPGK01000003 Nitrospirota Leptospirillum ferriphilum [JPGK] 246546 246621 + Ala GGC [ENA] ¡û
>W1911494717 OBMB01000001 Nitrospirota Leptospirillum ferriphilum [OBMB] 2104103 2104178 + Ala GGC [ENA] ¡û
>C151019620 CP007243 Nitrospirota Leptospirillum ferriphilum YSK [CP007243] 686090 686165 + Ala GGC [Ensembl] ¡û
>C151091674 CP012147 Nitrospirota Leptospirillum sp. Group II 'CF-1' [CP012147] 1831218 1831143 - Ala GGC [Ensembl] ¡û
>W1511705739 LGSH01000031 Nitrospirota Leptospirillum ferriphilum Sp-Cl [LGSH] 39545 39470 - Ala GGC [ENA] ¡û
>C121001321 AP012342 Nitrospirota Leptospirillum ferrooxidans C2-3 [AP012342] 1776592 1776517 - Ala GGC [Ensembl] ¡û
>W121055880 AIJM01000002 Unclassified mine drainage metagenome Group II 'C75' [AIJM] 129154 129079 - Ala GGC [ENA] ¡û
>C131001607 CP002919 Nitrospirota Leptospirillum ferriphilum ML-04 [CP002919] 808919 808994 + Ala GGC [Ensembl] ¡û
>WENV076967 AADL01000001 Acid Mine Drainage microbial communities from Richmond mine 82711 82634 - Ala GGC [ENA]
>WENV077039 AADL01000760 Acid Mine Drainage microbial communities from Richmond mine 449 372 - Ala GGC [ENA]
>WENV080238 AAWO01000003 Acid Mine Drainage microbial communities from Richmond mine 178415 178338 - Ala GGC [ENA]
Identical group No.674647 (9 seq.)
>A171003631 CP004145 Unclassified Ferroplasma acidarmanus Fer1 [CP004145] 1676285 1676214 - Ala GGC - ¡û
>A171006635 CP015363 Unclassified Ferroplasma acidiphilum Y [CP015363] 626516 626445 - Ala GGC - ¡û
>W141000057 AADL01001227 Unclassified mine drainage metagenome Group III [AADL] 626 555 - Ala GGC [ENA] ¡û
>W141000073 AADL01001492 Unclassified mine drainage metagenome Group III [AADL] 5598 5669 + Ala GGC [ENA] ¡û
>W141000143 AADL01002036 Unclassified mine drainage metagenome Group III [AADL] 700 628 - Ala GGC [ENA] ¡û
>W1610000077 AABC05000014 Unclassified Ferroplasma acidarmanus fer1 [AABC] 332167 332096 - Ala GGC [ENA] ¡û
>WENV077065 AADL01001227 Acid Mine Drainage microbial communities from Richmond mine 626 552 - Ala GGC [ENA]
>WENV077081 AADL01001492 Acid Mine Drainage microbial communities from Richmond mine 5598 5672 + Ala GGC [ENA]
>WENV077151 AADL01002036 Acid Mine Drainage microbial communities from Richmond mine 700 626 - Ala GGC [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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