tRNA genes clustered and arranged according to each identical group

Acid Mine Drainage microbial communities from Richmond mine

Anticodon = GTC

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.270371 (14 seq.)
>W1711628693 MPOJ01000002 Nitrospirota Leptospirillum ferriphilum [MPOJ] 25161 25085 - Asp GTC [ENA] ¡û
>W1711628766 MPOK01000065 Nitrospirota Leptospirillum ferriphilum [MPOK] 80744 80820 + Asp GTC [ENA] ¡û
>W141000170 AADL01002490 Unclassified mine drainage metagenome Group III [AADL] 35492 35568 + Asp GTC [ENA] ¡û
>W09106627 AAWO01000016 Unclassified mine drainage metagenome rubarum [AAWO] 21519 21595 + Asp GTC [ENA] ¡û
>W141803157 JPGK01000005 Nitrospirota Leptospirillum ferriphilum [JPGK] 17104 17180 + Asp GTC [ENA] ¡û
>W1911494720 OBMB01000001 Nitrospirota Leptospirillum ferriphilum [OBMB] 2389292 2389368 + Asp GTC [ENA] ¡û
>C151019623 CP007243 Nitrospirota Leptospirillum ferriphilum YSK [CP007243] 975636 975712 + Asp GTC [Ensembl] ¡û
>C151091677 CP012147 Nitrospirota Leptospirillum sp. Group II 'CF-1' [CP012147] 1545418 1545342 - Asp GTC [Ensembl] ¡û
>W1511705736 LGSH01000024 Nitrospirota Leptospirillum ferriphilum Sp-Cl [LGSH] 5182 5106 - Asp GTC [ENA] ¡û
>C121001324 AP012342 Nitrospirota Leptospirillum ferrooxidans C2-3 [AP012342] 1293917 1293841 - Asp GTC [Ensembl] ¡û
>W121055909 AIJM01000055 Unclassified mine drainage metagenome Group II 'C75' [AIJM] 20863 20787 - Asp GTC [ENA] ¡û
>C131001610 CP002919 Nitrospirota Leptospirillum ferriphilum ML-04 [CP002919] 1091725 1091801 + Asp GTC [Ensembl] ¡û
>WENV076995 AADL01000070 Acid Mine Drainage microbial communities from Richmond mine 589 667 + Asp GTC [ENA]
>WENV080245 AAWO01000016 Acid Mine Drainage microbial communities from Richmond mine 21518 21596 + Asp GTC [ENA]
Identical group No.488106 (10 seq.)
>A171003628 CP004145 Unclassified Ferroplasma acidarmanus Fer1 [CP004145] 1684877 1684950 + Asp GTC - ¡û
>A171006616 CP015363 Unclassified Ferroplasma acidiphilum Y [CP015363] 635108 635181 + Asp GTC - ¡û
>W141000071 AADL01001490 Unclassified mine drainage metagenome Group III [AADL] 3824 3749 - Asp GTC [ENA] ¡û
>W141000072 AADL01001491 Unclassified mine drainage metagenome Group III [AADL] 211 137 - Asp GTC [ENA] ¡û
>W141000147 AADL01002079 Unclassified mine drainage metagenome Group III [AADL] 1141 1215 + Asp GTC [ENA] ¡û
>ENV09002309 ACXL01000008 Thermoplasmatales archaeon E-plasma EplasmaContig2057 156425 156350 - Asp GTC [ENA] ¡û
>W1610000076 AABC05000014 Unclassified Ferroplasma acidarmanus fer1 [AABC] 340759 340832 + Asp GTC [ENA] ¡û
>WENV077079 AADL01001490 Acid Mine Drainage microbial communities from Richmond mine 3824 3747 - Asp GTC [ENA]
>WENV077080 AADL01001491 Acid Mine Drainage microbial communities from Richmond mine 211 134 - Asp GTC [ENA]
>WENV077155 AADL01002079 Acid Mine Drainage microbial communities from Richmond mine 1141 1218 + Asp GTC [ENA]
Identical group No.488114 (5 seq.)
>A171007742 LT671858 Unclassified Cuniculiplasma divulgatum S5(T) [LT671858] 1218495 1218567 + Asp GTC - ¡û
>A171007779 LT719092 Unclassified Cuniculiplasma divulgatum PM4 [LT719092] 1221318 1221390 + Asp GTC - ¡û
>W141000139 AADL01001966 Unclassified mine drainage metagenome Group III [AADL] 3014 2939 - Asp GTC [ENA] ¡û
>ENV09002059 ACXJ01008428 Mine drainage metagenome Contig1 600 675 + Asp GTC [ENA] ¡û
>WENV077147 AADL01001966 Acid Mine Drainage microbial communities from Richmond mine 3014 2939 - Asp GTC [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK