tRNA genes clustered and arranged according to each identical group

Acid Mine Drainage microbial communities from Richmond mine

Anticodon = TAC

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.451317 (13 seq.)
>W1711628690 MPOJ01000002 Nitrospirota Leptospirillum ferriphilum [MPOJ] 25758 25833 + Val TAC [ENA] ¡û
>W1711628768 MPOK01000065 Nitrospirota Leptospirillum ferriphilum [MPOK] 80147 80072 - Val TAC [ENA] ¡û
>W141000172 AADL01002490 Unclassified mine drainage metagenome Group III [AADL] 34897 34822 - Val TAC [ENA] ¡û
>W09106629 AAWO01000016 Unclassified mine drainage metagenome rubarum [AAWO] 20922 20847 - Val TAC [ENA] ¡û
>W141803159 JPGK01000005 Nitrospirota Leptospirillum ferriphilum [JPGK] 16509 16434 - Val TAC [ENA] ¡û
>W1911494722 OBMB01000001 Nitrospirota Leptospirillum ferriphilum [OBMB] 2388697 2388622 - Val TAC [ENA] ¡û
>C151019650 CP007243 Nitrospirota Leptospirillum ferriphilum YSK [CP007243] 975039 974964 - Val TAC [Ensembl] ¡û
>C151091662 CP012147 Nitrospirota Leptospirillum sp. Group II 'CF-1' [CP012147] 1546015 1546090 + Val TAC [Ensembl] ¡û
>W1511705735 LGSH01000024 Nitrospirota Leptospirillum ferriphilum Sp-Cl [LGSH] 5779 5854 + Val TAC [ENA] ¡û
>W121055908 AIJM01000055 Unclassified mine drainage metagenome Group II 'C75' [AIJM] 21460 21535 + Val TAC [ENA] ¡û
>C131001637 CP002919 Nitrospirota Leptospirillum ferriphilum ML-04 [CP002919] 1091128 1091053 - Val TAC [Ensembl] ¡û
>WENV076986 AADL01000037 Acid Mine Drainage microbial communities from Richmond mine 34853 34778 - Val TAC [ENA]
>WENV080244 AAWO01000016 Acid Mine Drainage microbial communities from Richmond mine 20922 20847 - Val TAC [ENA]
Identical group No.470999 (32 seq.)
>A171007758 LT671858 Unclassified Cuniculiplasma divulgatum S5(T) [LT671858] 562082 562010 - Val TAC - ¡û
>A171007795 LT719092 Unclassified Cuniculiplasma divulgatum PM4 [LT719092] 560422 560349 - Val TAC - ¡û
>W141000080 AADL01001502 Unclassified mine drainage metagenome Group III [AADL] 59348 59276 - Val TAC [ENA] ¡û
>W141000112 AADL01001651 Unclassified mine drainage metagenome Group III [AADL] 705 633 - Val TAC [ENA] ¡û
>W141000121 AADL01001728 Unclassified mine drainage metagenome Group III [AADL] 891 963 + Val TAC [ENA] ¡û
>W141000141 AADL01001991 Unclassified mine drainage metagenome Group III [AADL] 4467 4394 - Val TAC [ENA] ¡û
>WENV180343181 OBLK01000084 [OBLK] soil metagenome; Clay 74 2 - Val TAC [ENA] ¢þ
>WENV181291733 OFHC01009749 [OFHC] soil metagenome; Clay 106 179 + Val TAC [ENA] ¢þ
>WENV181292294 OFHE01000039 [OFHE] soil metagenome; Clay 17680 17753 + Val TAC [ENA] ¢þ
>WENV181292368 OFHE01002796 [OFHE] soil metagenome; Clay 600 672 + Val TAC [ENA] ¢þ
>WENV181295032 OFHI01000013 [OFHI] soil metagenome; Clay 9716 9789 + Val TAC [ENA] ¢þ
>WENV181295075 OFHI01000087 [OFHI] soil metagenome; Clay 21185 21257 + Val TAC [ENA] ¢þ
>WENV181295143 OFHI01001227 [OFHI] soil metagenome; Clay 876 949 + Val TAC [ENA] ¢þ
>WENV181295634 OFHJ01000034 [OFHJ] soil metagenome; Clay 16747 16675 - Val TAC [ENA] ¢þ
>WENV181295738 OFHJ01000352 [OFHJ] soil metagenome; Clay 13955 13882 - Val TAC [ENA] ¢þ
>WENV181295845 OFHJ01001125 [OFHJ] soil metagenome; Clay 7858 7786 - Val TAC [ENA] ¢þ
>WENV181296541 OFHJ01055895 [OFHJ] soil metagenome; Clay 260 188 - Val TAC [ENA] ¢þ
>W1910585066 JYHS01000001 Unclassified Acidiplasma sp. MBA-1 [JYHS] 346890 346963 + Val TAC [ENA] ¡û
>ENV09001967 ACXJ01002138 Mine drainage metagenome Contig1 1028 955 - Val TAC [ENA] ¡û
>ENV09001987 ACXJ01004050 Mine drainage metagenome Contig1 467 539 + Val TAC [ENA] ¡û
>ENV09002199 ACXJ01011098 Mine drainage metagenome Contig1 1184 1111 - Val TAC [ENA] ¡û
>ENV09002260 ACXJ01012237 Mine drainage metagenome Contig1 1616 1543 - Val TAC [ENA] ¡û
>ENV09002284 ACXK01000057 Thermoplasmatales archaeon A-plasma AplasmaContig10144 105878 105951 + Val TAC [ENA] ¡û
>ENV09002331 ACXL01000017 Thermoplasmatales archaeon E-plasma EplasmaContig2057 79633 79561 - Val TAC [ENA] ¡û
>W1610047601 BBDK01000031 Unclassified Acidiplasma cupricumulans JCM 13668 [BBDK] 2181 2106 - Val TAC [ENA] ¡û
>W1610642303 LJCQ01000179 Unclassified Acidiplasma aeolicum V [LJCQ] 3865 3792 - Val TAC [ENA] ¡û
>W1610670456 LKBG01000078 Unclassified Acidiplasma aeolicum VT [LKBG] 15147 15220 + Val TAC [ENA] ¡û
>W1610670491 LKBH01000045 Unclassified Acidiplasma cupricumulans BH2 [LKBH] 2179 2104 - Val TAC [ENA] ¡û
>WENV077089 AADL01001502 Acid Mine Drainage microbial communities from Richmond mine 59348 59273 - Val TAC [ENA]
>WENV077120 AADL01001651 Acid Mine Drainage microbial communities from Richmond mine 705 630 - Val TAC [ENA]
>WENV077129 AADL01001728 Acid Mine Drainage microbial communities from Richmond mine 891 966 + Val TAC [ENA]
>WENV077149 AADL01001991 Acid Mine Drainage microbial communities from Richmond mine 4467 4392 - Val TAC [ENA]
Identical group No.674640 (2 seq.)
>W141000007 AADL01000270 Unclassified mine drainage metagenome Group III [AADL] 841 915 + Val TAC [ENA] ¡û
>WENV077015 AADL01000270 Acid Mine Drainage microbial communities from Richmond mine 841 915 + Val TAC [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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