tRNA genes clustered and arranged according to each identical group

Acid Mine Drainage microbial communities from Richmond mine

Anticodon = TCC

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.488107 (7 seq.)
>A171003626 CP004145 Unclassified Ferroplasma acidarmanus Fer1 [CP004145] 1057550 1057622 + Gly TCC - ¡û
>A171006614 CP015363 Unclassified Ferroplasma acidiphilum Y [CP015363] 88186 88258 + Gly TCC - ¡û
>W141000091 AADL01001526 Unclassified mine drainage metagenome Group III [AADL] 31058 31131 + Gly TCC [ENA] ¡û
>W141000119 AADL01001693 Unclassified mine drainage metagenome Group III [AADL] 1867 1795 - Gly TCC [ENA] ¡û
>W1610000070 AABC05000011 Unclassified Ferroplasma acidarmanus fer1 [AABC] 184616 184688 + Gly TCC [ENA] ¡û
>WENV077099 AADL01001526 Acid Mine Drainage microbial communities from Richmond mine 31058 31133 + Gly TCC [ENA]
>WENV077127 AADL01001693 Acid Mine Drainage microbial communities from Richmond mine 1867 1792 - Gly TCC [ENA]
Identical group No.653330 (15 seq.)
>W1711628716 MPOJ01000011 Nitrospirota Leptospirillum ferriphilum [MPOJ] 81613 81687 + Gly TCC [ENA] ¡û
>W1711628738 MPOK01000002 Nitrospirota Leptospirillum ferriphilum [MPOK] 47051 47125 + Gly TCC [ENA] ¡û
>W141000116 AADL01001679 Unclassified mine drainage metagenome Group III [AADL] 116 190 + Gly TCC [ENA] ¡û
>W141000180 AADL01002502 Unclassified mine drainage metagenome Group III [AADL] 15033 14959 - Gly TCC [ENA] ¡û
>W09106662 AAWO01000082 Unclassified mine drainage metagenome rubarum [AAWO] 100869 100795 - Gly TCC [ENA] ¡û
>W141803170 JPGK01000011 Nitrospirota Leptospirillum ferriphilum [JPGK] 355 281 - Gly TCC [ENA] ¡û
>W1911494739 OBMB01000001 Nitrospirota Leptospirillum ferriphilum [OBMB] 606581 606507 - Gly TCC [ENA] ¡û
>C151019642 CP007243 Nitrospirota Leptospirillum ferriphilum YSK [CP007243] 1484263 1484189 - Gly TCC [Ensembl] ¡û
>C151091654 CP012147 Nitrospirota Leptospirillum sp. Group II 'CF-1' [CP012147] 988668 988742 + Gly TCC [Ensembl] ¡û
>W1511705727 LGSH01000006 Nitrospirota Leptospirillum ferriphilum Sp-Cl [LGSH] 60934 61008 + Gly TCC [ENA] ¡û
>W121055900 AIJM01000034 Unclassified mine drainage metagenome Group II 'C75' [AIJM] 32857 32931 + Gly TCC [ENA] ¡û
>C131001629 CP002919 Nitrospirota Leptospirillum ferriphilum ML-04 [CP002919] 1532909 1532835 - Gly TCC [Ensembl] ¡û
>WENV077004 AADL01000098 Acid Mine Drainage microbial communities from Richmond mine 572 498 - Gly TCC [ENA]
>WENV077124 AADL01001679 Acid Mine Drainage microbial communities from Richmond mine 116 190 + Gly TCC [ENA]
>WENV080278 AAWO01000082 Acid Mine Drainage microbial communities from Richmond mine 100869 100795 - Gly TCC [ENA]
Identical group No.674641 (6 seq.)
>W141000017 AADL01000468 Unclassified mine drainage metagenome Group III [AADL] 653 579 - Gly TCC [ENA] ¡û
>W141000024 AADL01000568 Unclassified mine drainage metagenome Group III [AADL] 1012 938 - Gly TCC [ENA] ¡û
>W09132222 ACNP01000065 Unclassified mine drainage metagenome ferrodiazotrophum [ACNP] 14651 14577 - Gly TCC [ENA] ¡û
>ENV09001979 ACXJ01003227 Mine drainage metagenome Contig1 595 669 + Gly TCC [ENA] ¡û
>WENV077025 AADL01000468 Acid Mine Drainage microbial communities from Richmond mine 653 579 - Gly TCC [ENA]
>WENV077033 AADL01000568 Acid Mine Drainage microbial communities from Richmond mine 1012 938 - Gly TCC [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK