tRNA genes clustered and arranged according to each identical group

Acid Mine Drainage microbial communities from Richmond mine

Anticodon = TGC

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.451322 (18 seq.)
>W1711628696 MPOJ01000003 Nitrospirota Leptospirillum ferriphilum [MPOJ] 27169 27244 + Ala TGC [ENA] ¡û
>W1711628757 MPOK01000021 Nitrospirota Leptospirillum ferriphilum [MPOK] 27163 27238 + Ala TGC [ENA] ¡û
>W141000185 AADL01002504 Unclassified mine drainage metagenome Group III [AADL] 1944 2019 + Ala TGC [ENA] ¡û
>W141000187 AADL01002504 Unclassified mine drainage metagenome Group III [AADL] 73247 73172 - Ala TGC [ENA] ¡û
>W09106640 AAWO01000056 Unclassified mine drainage metagenome rubarum [AAWO] 12998 12923 - Ala TGC [ENA] ¡û
>W1911494702 OBMB01000001 Nitrospirota Leptospirillum ferriphilum [OBMB] 368311 368386 + Ala TGC [ENA] ¡û
>W1911494744 OBMB01000001 Nitrospirota Leptospirillum ferriphilum [OBMB] 439725 439650 - Ala TGC [ENA] ¡û
>C151019627 CP007243 Nitrospirota Leptospirillum ferriphilum YSK [CP007243] 1230867 1230942 + Ala TGC [Ensembl] ¡û
>C151019647 CP007243 Nitrospirota Leptospirillum ferriphilum YSK [CP007243] 1301005 1300930 - Ala TGC [Ensembl] ¡û
>C151091659 CP012147 Nitrospirota Leptospirillum sp. Group II 'CF-1' [CP012147] 1165092 1165167 + Ala TGC [Ensembl] ¡û
>C151091681 CP012147 Nitrospirota Leptospirillum sp. Group II 'CF-1' [CP012147] 1239428 1239353 - Ala TGC [Ensembl] ¡û
>W1511705733 LGSH01000013 Nitrospirota Leptospirillum ferriphilum Sp-Cl [LGSH] 2004 2079 + Ala TGC [ENA] ¡û
>W121055892 AIJM01000012 Unclassified mine drainage metagenome Group II 'C75' [AIJM] 17048 17123 + Ala TGC [ENA] ¡û
>W121055913 AIJM01000065 Unclassified mine drainage metagenome Group II 'C75' [AIJM] 32211 32286 + Ala TGC [ENA] ¡û
>C131001614 CP002919 Nitrospirota Leptospirillum ferriphilum ML-04 [CP002919] 1295904 1295979 + Ala TGC [Ensembl] ¡û
>C131001634 CP002919 Nitrospirota Leptospirillum ferriphilum ML-04 [CP002919] 1366088 1366013 - Ala TGC [Ensembl] ¡û
>WENV076998 AADL01000078 Acid Mine Drainage microbial communities from Richmond mine 2203 2128 - Ala TGC [ENA]
>WENV080255 AAWO01000056 Acid Mine Drainage microbial communities from Richmond mine 12998 12923 - Ala TGC [ENA]
Identical group No.488092 (6 seq.)
>W141000020 AADL01000473 Unclassified mine drainage metagenome Group III [AADL] 2216 2141 - Ala TGC [ENA] ¡û
>W141085068 AURA01000402 Nitrospirota Leptospirillum sp. Group IV 'UBA BS' [AURA] 1210 1285 + Ala TGC [ENA] ¡û
>W09132218 ACNP01000064 Unclassified mine drainage metagenome ferrodiazotrophum [ACNP] 20627 20552 - Ala TGC [ENA] ¡û
>ENV09002019 ACXJ01006897 Mine drainage metagenome Contig1 485 560 + Ala TGC [ENA] ¡û
>ENV09002166 ACXJ01010641 Mine drainage metagenome Contig1 1212 1287 + Ala TGC [ENA] ¡û
>WENV077027 AADL01000473 Acid Mine Drainage microbial communities from Richmond mine 2216 2141 - Ala TGC [ENA]
Identical group No.674649 (8 seq.)
>A171007726 LT671858 Unclassified Cuniculiplasma divulgatum S5(T) [LT671858] 56252 56323 + Ala TGC - ¡û
>A171007763 LT719092 Unclassified Cuniculiplasma divulgatum PM4 [LT719092] 56252 56323 + Ala TGC - ¡û
>W141000122 AADL01001734 Unclassified mine drainage metagenome Group III [AADL] 8626 8697 + Ala TGC [ENA] ¡û
>W141000153 AADL01002240 Unclassified mine drainage metagenome Group III [AADL] 601 672 + Ala TGC [ENA] ¡û
>ENV09002027 ACXJ01007210 Mine drainage metagenome Contig1 1349 1278 - Ala TGC [ENA] ¡û
>ENV09002185 ACXJ01010989 Mine drainage metagenome Contig1 257 186 - Ala TGC [ENA] ¡û
>WENV077130 AADL01001734 Acid Mine Drainage microbial communities from Richmond mine 8626 8700 + Ala TGC [ENA]
>WENV077161 AADL01002240 Acid Mine Drainage microbial communities from Richmond mine 601 675 + Ala TGC [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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