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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Ackermannviridae
Anticodon = TCT
HIT:
5 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.318966 (1 seq.)
>PHG181008356
MH517022
Ackermannviridae
Acinetobacter phage SH-Ab 15599 (MH517022)
82746
82822
+
Arg
TCT
[ENA]
¡û
Identical group No.348969 (1 seq.)
>PHG14101879
JX181829
Ackermannviridae
Salmonella phage SKML-39 (JX181829)
147608
147533
-
Arg
TCT
[ENA]
¡û
Identical group No.438746 (1 seq.)
>PHG181006771
MG428990
Ackermannviridae
Klebsiella phage Menlow (MG428990)
21023
20947
-
Arg
TCT
[ENA]
¡û
Identical group No.523521 (1 seq.)
>PHG181004481
LC121084
Ackermannviridae
Ralstonia phage RSP15 (LC121084)
87564
87489
-
Arg
TCT
[ENA]
¡û
Identical group No.572044 (1 seq.)
>PHG183000729
KY914485
Ackermannviridae
Aeromonas phage phiA8-29 (KY914485)
80744
80669
-
Arg
TCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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