This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Ackermannviridae
Anticodon = TTG
HIT:
3 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.506666 (1 seq.)
>PHG14100146
FQ312032
Ackermannviridae
Salmonella virus ViI phi 2 (FQ312032)
138089
138164
+
Gln
TTG
[ENA]
¡û
Identical group No.523520 (1 seq.)
>PHG181004480
LC121084
Ackermannviridae
Ralstonia phage RSP15 (LC121084)
90637
90562
-
Gln
TTG
[ENA]
¡û
Identical group No.825953 (4 seq.)
>PHG181006774
MG428990
Ackermannviridae
Klebsiella phage Menlow (MG428990)
19823
19750
-
Gln
TTG
[ENA]
¡û
>PHG181006780
MG428991
Ackermannviridae
Klebsiella phage May (MG428991)
19252
19179
-
Gln
TTG
[ENA]
¡û
>PHG181007282
MG770379
Ackermannviridae
Klebsiella virus vB_KpnM_KpS110 (MG770379)
73410
73337
-
Gln
TTG
[ENA]
¡û
>PHG14100012
AB797215
Ackermannviridae
Klebsiella phage 0507-KN2-1 (AB797215)
83804
83731
-
Gln
TTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK