tRNA genes clustered and arranged according to each identical group

Actinobacteria

Anticodon = GTA

HIT: 6 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.71928 (1 seq.)
>PL172000013 CP012886 Actinobacteria Mycobacterium chimaera AH16 plasmid:unnamed1 230679 230767 + Tyr GTA [ENA] ¡û
Identical group No.153934 (85 seq.)
>W1710891789 LNDA01000070 Actinomycetota Nocardia jinanensis NBRC 108249 [LNDA] 11094 11009 - Tyr GTA [ENA] ¡û
>W1710935819 LOKT01000006 Actinomycetota Nocardia donostiensis [LOKT] 229089 229174 + Tyr GTA [ENA] ¡û
>W1711739097 MUBO01000197 Actinomycetota Streptomyces daghestanicus [MUBO] 33290 33375 + Tyr GTA [ENA] ¡û
>W1711747313 MUKP01000013 Actinomycetota Nocardia donostiensis [MUKP] 83803 83718 - Tyr GTA [ENA] ¡û
>W1711750424 MUMY01000017 Actinomycetota Nocardia donostiensis [MUMY] 84503 84418 - Tyr GTA [ENA] ¡û
>PL171001804 LN868939 Actinobacteria Nocardia farcinica NCTC11134 plasmid:2 1318438 1318523 + Tyr GTA [ENA] ¡û
>C014833 AP006618 Actinomycetota Nocardia farcinica IFM 10152 [AP006618] 5421519 5421434 - Tyr GTA [Ensembl] ¡û
>WENV180031981 FTJU01002312 [FTJU] metagenome; soil 20857 20941 + Tyr GTA [ENA] ¢þ
>W141168702 AXVD01000010 Actinomycetota Nocardia sp. CNY236 [AXVD] 132300 132217 - Tyr GTA [ENA] ¡û
>C181139074 CP026746 Actinomycetota Nocardia cyriacigeorgica MDA3349 [CP026746] 2404623 2404707 + Tyr GTA - ¡û
>C181200291 CP031418 Actinomycetota Nocardia farcinica W6977 [CP031418] 4292075 4292159 + Tyr GTA - ¡û
>C191219100 LR215973 Actinomycetota Nocardia cyriacigeorgica 3012STDY6756504 [LR215973] 4081099 4081015 - Tyr GTA - ¡û
>W141759293 JNZF01000011 Actinomycetota Nocardia carnea carneus [JNZF] 98311 98226 - Tyr GTA [ENA] ¡û
>W141760948 JOAJ01000017 Actinomycetota Nocardia rhamnosiphila [JOAJ] 81586 81671 + Tyr GTA [ENA] ¡û
>W141767068 JOEJ01000017 Actinomycetota Nocardia rhamnosiphila [JOEJ] 81548 81633 + Tyr GTA [ENA] ¡û
>W1910433920 FVWC01003260 Actinomycetota Mycobacteroides abscessus subsp. abscessus 537 [FVWC] 67 151 + Tyr GTA [ENA] ¡û
>W1911422406 NXEG01000003 Actinomycetota Nocardia farcinica CNM20091955 [NXEG] 335702 335786 + Tyr GTA [ENA] ¡û
>W1911422502 NXEH01000036 Actinomycetota Nocardia farcinica CNM20080921 [NXEH] 22805 22889 + Tyr GTA [ENA] ¡û
>W1911493009 OBEG01000002 Actinomycetota Nocardia amikacinitolerans DSM 45537 [OBEG] 1031062 1030979 - Tyr GTA [ENA] ¡û
>W1911573035 PDDW01000001 Actinomycetota Nocardia sp. FDAARGOS_372 [PDDW] 4132490 4132406 - Tyr GTA [ENA] ¡û
>W1810282655 PSZF01000009 Actinomycetota Nocardia cyriacigeorgica MDA3732 [PSZF] 66186 66270 + Tyr GTA [ENA] ¡û
>W1810532533 QCYJ01000130 Actinomycetota Nocardia aurea SYSU K10002 [QCYJ] 297200 297284 + Tyr GTA [ENA] ¡û
>W1810720287 QNRE01000005 Actinomycetota Nocardia puris DSM 44599 [QNRE] 183883 183967 + Tyr GTA [ENA] ¡û
>C121016059 FO082843 Actinomycetota Nocardia cyriacigeorgica GUH-2 [FO082843] 5495884 5495799 - Tyr GTA [Ensembl] ¡û
>W121124904 BAFP01000137 Actinomycetota Nocardia abscessus NBRC 100374 [BAFP] 9736 9653 - Tyr GTA [ENA] ¡û
>W121124999 BAFR01000203 Actinomycetota Nocardia araoensis NBRC 100135 [BAFR] 41214 41129 - Tyr GTA [ENA] ¡û
>W121125049 BAFS01000271 Actinomycetota Nocardia asiatica NBRC 100129 [BAFS] 8547 8462 - Tyr GTA [ENA] ¡û
>W121125146 BAFU01000083 Actinomycetota Nocardia brevicatena NBRC 12119 [BAFU] 9550 9467 - Tyr GTA [ENA] ¡û
>W121125195 BAFV01000067 Actinomycetota Nocardia carnea NBRC 14403 [BAFV] 23177 23092 - Tyr GTA [ENA] ¡û
>W121125357 BAFY01000220 Actinomycetota Nocardia cyriacigeorgica NBRC 100375 [BAFY] 27106 27021 - Tyr GTA [ENA] ¡û
>W121125404 BAFZ01000116 Actinomycetota Nocardia exalbida NBRC 100660 [BAFZ] 21672 21587 - Tyr GTA [ENA] ¡û
>W121125454 BAGA01000132 Actinomycetota Nocardia higoensis NBRC 100133 [BAGA] 114672 114587 - Tyr GTA [ENA] ¡û
>W121125680 BAGE01000057 Actinomycetota Nocardia paucivorans NBRC 100373 [BAGE] 118985 118902 - Tyr GTA [ENA] ¡û
>W121125722 BAGF01000079 Actinomycetota Nocardia pneumoniae NBRC 100136 [BAGF] 23234 23151 - Tyr GTA [ENA] ¡û
>W121125774 BAGG01000115 Actinomycetota Nocardia takedensis NBRC 100417 [BAGG] 7964 8047 + Tyr GTA [ENA] ¡û
>W121125924 BAGJ01000168 Actinomycetota Nocardia testacea NBRC 100365 [BAGJ] 11149 11064 - Tyr GTA [ENA] ¡û
>W121126142 BAGN01000216 Actinomycetota Nocardia vinacea NBRC 16497 [BAGN] 31 116 + Tyr GTA [ENA] ¡û
>W1610069088 BCRV01000001 Actinomycetota Skermania piniformis NBRC 15059 [BCRV] 85963 85878 - Tyr GTA [ENA] ¡û
>W1610078323 BDAU01000048 Actinomycetota Nocardia amikacinitolerans NBRC 108937 [BDAU] 27235 27318 + Tyr GTA [ENA] ¡û
>W1610078559 BDAZ01000012 Actinomycetota Nocardia anaemiae NBRC 100462 [BDAZ] 103722 103637 - Tyr GTA [ENA] ¡û
>W1610078611 BDBA01000050 Actinomycetota Nocardia amamiensis NBRC 102102 [BDBA] 46893 46976 + Tyr GTA [ENA] ¡û
>W1610078674 BDBB01000024 Actinomycetota Nocardia arthritidis NBRC 100137 [BDBB] 19923 19840 - Tyr GTA [ENA] ¡û
>W1610078741 BDBC01000070 Actinomycetota Nocardia beijingensis NBRC 16342 [BDBC] 40094 40179 + Tyr GTA [ENA] ¡û
>W1610079098 BDBJ01000141 Actinomycetota Nocardia farcinica NBRC 15532 [BDBJ] 8320 8405 + Tyr GTA [ENA] ¡û
>W1610079220 BDBM01000004 Actinomycetota Nocardia gamkensis NBRC 108242 [BDBM] 319427 319510 + Tyr GTA [ENA] ¡û
>W1610079353 BDBO01000127 Actinomycetota Nocardia jinanensis NBRC 108249 [BDBO] 49178 49263 + Tyr GTA [ENA] ¡û
>W1610079379 BDBP01000031 Actinomycetota Nocardia lijiangensis NBRC 108240 [BDBP] 85391 85308 - Tyr GTA [ENA] ¡û
>W1610079597 BDBT01000020 Actinomycetota Nocardia shimofusensis NBRC 100134 [BDBT] 113385 113470 + Tyr GTA [ENA] ¡û
>W1610079747 BDBW01000022 Actinomycetota Nocardia puris NBRC 108233 [BDBW] 183787 183872 + Tyr GTA [ENA] ¡û
>W1610079828 BDBX01000087 Actinomycetota Nocardia sienata NBRC 100364 [BDBX] 1841 1926 + Tyr GTA [ENA] ¡û
>W1610079873 BDBY01000256 Actinomycetota Nocardia pseudovaccinii NBRC 100343 [BDBY] 4879 4794 - Tyr GTA [ENA] ¡û
>W1610079915 BDBZ01000024 Actinomycetota Nocardia speluncae NBRC 108251 [BDBZ] 65580 65665 + Tyr GTA [ENA] ¡û
>W1610080221 BDCF01000001 Actinomycetota Nocardia xishanensis NBRC 101358 [BDCF] 469093 469010 - Tyr GTA [ENA] ¡û
>W1610080305 BDCG01000016 Actinomycetota Nocardia flavorosea NBRC 108225 [BDCG] 306048 306133 + Tyr GTA [ENA] ¡û
>W1610080461 BDCJ01000015 Actinomycetota Nocardia grenadensis NBRC 108939 [BDCJ] 10894 10809 - Tyr GTA [ENA] ¡û
>W1610080490 BDCK01000011 Actinomycetota Nocardia niwae NBRC 108934 = DSM 45340 [BDCK] 21704 21619 - Tyr GTA [ENA] ¡û
>W1610080578 BDCL01000067 Actinomycetota Nocardia rhamnosiphila NBRC 108938 [BDCL] 1709 1794 + Tyr GTA [ENA] ¡û
>W1610080869 BDCT01000045 Actinomycetota Nocardia arizonensis [BDCT] 88952 88867 - Tyr GTA [ENA] ¡û
>W1610080910 BDCU01000047 Actinomycetota Nocardia fusca NBRC 14340 [BDCU] 10780 10695 - Tyr GTA [ENA] ¡û
>W1610617954 LGYZ01000116 Actinomycetota Nocardia arizonensis [LGYZ] 89000 88915 - Tyr GTA [ENA] ¡û
>W1610752154 LNDA01000070 Actinomycetota Nocardia jinanensis NBRC 108249 [LNDA] 11094 11009 - Tyr GTA [ENA] ¡û
>W1710066461 BCRV01000001 Actinomycetota Skermania piniformis NBRC 15059 [BCRV] 85963 85878 - Tyr GTA [ENA] ¡û
>W1710076882 BDAU01000048 Actinomycetota Nocardia amikacinitolerans NBRC 108937 [BDAU] 27235 27318 + Tyr GTA [ENA] ¡û
>W1710077118 BDAZ01000012 Actinomycetota Nocardia anaemiae NBRC 100462 [BDAZ] 103722 103637 - Tyr GTA [ENA] ¡û
>W1710077170 BDBA01000050 Actinomycetota Nocardia amamiensis NBRC 102102 [BDBA] 46893 46976 + Tyr GTA [ENA] ¡û
>W1710077233 BDBB01000024 Actinomycetota Nocardia arthritidis NBRC 100137 [BDBB] 19923 19840 - Tyr GTA [ENA] ¡û
>W1710077300 BDBC01000070 Actinomycetota Nocardia beijingensis NBRC 16342 [BDBC] 40094 40179 + Tyr GTA [ENA] ¡û
>W1710077657 BDBJ01000141 Actinomycetota Nocardia farcinica NBRC 15532 [BDBJ] 8320 8405 + Tyr GTA [ENA] ¡û
>W1710077779 BDBM01000004 Actinomycetota Nocardia gamkensis NBRC 108242 [BDBM] 319427 319510 + Tyr GTA [ENA] ¡û
>W1710077912 BDBO01000127 Actinomycetota Nocardia jinanensis NBRC 108249 [BDBO] 49178 49263 + Tyr GTA [ENA] ¡û
>W1710077938 BDBP01000031 Actinomycetota Nocardia lijiangensis NBRC 108240 [BDBP] 85391 85308 - Tyr GTA [ENA] ¡û
>W1710078156 BDBT01000020 Actinomycetota Nocardia shimofusensis NBRC 100134 [BDBT] 113385 113470 + Tyr GTA [ENA] ¡û
>W1710078306 BDBW01000022 Actinomycetota Nocardia puris NBRC 108233 [BDBW] 183787 183872 + Tyr GTA [ENA] ¡û
>W1710078387 BDBX01000087 Actinomycetota Nocardia sienata NBRC 100364 [BDBX] 1841 1926 + Tyr GTA [ENA] ¡û
>W1710078432 BDBY01000256 Actinomycetota Nocardia pseudovaccinii NBRC 100343 [BDBY] 4879 4794 - Tyr GTA [ENA] ¡û
>W1710078474 BDBZ01000024 Actinomycetota Nocardia speluncae NBRC 108251 [BDBZ] 65580 65665 + Tyr GTA [ENA] ¡û
>W1710078780 BDCF01000001 Actinomycetota Nocardia xishanensis NBRC 101358 [BDCF] 469093 469010 - Tyr GTA [ENA] ¡û
>W1710078864 BDCG01000016 Actinomycetota Nocardia flavorosea NBRC 108225 [BDCG] 306048 306133 + Tyr GTA [ENA] ¡û
>W1710079020 BDCJ01000015 Actinomycetota Nocardia grenadensis NBRC 108939 [BDCJ] 10894 10809 - Tyr GTA [ENA] ¡û
>W1710079049 BDCK01000011 Actinomycetota Nocardia niwae NBRC 108934 = DSM 45340 [BDCK] 21704 21619 - Tyr GTA [ENA] ¡û
>W1710079137 BDCL01000067 Actinomycetota Nocardia rhamnosiphila NBRC 108938 [BDCL] 1709 1794 + Tyr GTA [ENA] ¡û
>W1710079428 BDCT01000045 Actinomycetota Nocardia arizonensis [BDCT] 88952 88867 - Tyr GTA [ENA] ¡û
>W1710079469 BDCU01000047 Actinomycetota Nocardia fusca NBRC 14340 [BDCU] 10780 10695 - Tyr GTA [ENA] ¡û
>W1710599675 FTOW01000009 Actinomycetota Nocardia farcinica [FTOW] 8392 8307 - Tyr GTA [ENA] ¡û
>W1710744129 LGYZ01000116 Actinomycetota Nocardia arizonensis [LGYZ] 89000 88915 - Tyr GTA [ENA] ¡û
Identical group No.162847 (4 seq.)
>W1711080874 LSRJ01000005 Actinomycetota Tsukamurella tyrosinosolvens [LSRJ] 4495 4578 + Tyr GTA [ENA] ¡û
>PL191001626 LR134450 Actinobacteria Tsukamurella tyrosinosolvens NCTC13231 plasmid:8 (LR134450) 285175 285092 - Tyr GTA [ENA] ¡û
>W1610919741 LSRJ01000005 Actinomycetota Tsukamurella tyrosinosolvens [LSRJ] 4495 4578 + Tyr GTA [ENA] ¡û
>W1710534673 FNSA01000003 Actinomycetota Tsukamurella tyrosinosolvens [FNSA] 2704685 2704768 + Tyr GTA [ENA] ¡û
Identical group No.193815 (14 seq.)
>W1711069498 LSFR01000002 Actinomycetota Tsukamurella tyrosinosolvens [LSFR] 533484 533568 + Tyr GTA [ENA] ¡û
>W1711080647 LSRE01000050 Actinomycetota Tsukamurella pseudospumae [LSRE] 605383 605299 - Tyr GTA [ENA] ¡û
>W1711080691 LSRF01000058 Actinomycetota Tsukamurella pseudospumae [LSRF] 668545 668629 + Tyr GTA [ENA] ¡û
>W1711080732 LSRG01000014 Actinomycetota Tsukamurella tyrosinosolvens [LSRG] 496763 496847 + Tyr GTA [ENA] ¡û
>W1711080893 LSRJ01000011 Actinomycetota Tsukamurella tyrosinosolvens [LSRJ] 679323 679407 + Tyr GTA [ENA] ¡û
>PL191001669 LR134465 Actinobacteria Tsukamurella tyrosinosolvens NCTC13231 plasmid:23 (LR134465) 374280 374196 - Tyr GTA [ENA] ¡û
>C181035814 CP019066 Actinomycetota Tsukamurella tyrosinosolvens MH1 [CP019066] 785356 785440 + Tyr GTA - ¡û
>W1810760466 QPKD01000042 Actinomycetota Tsukamurella tyrosinosolvens PW899 [QPKD] 7104 7188 + Tyr GTA [ENA] ¡û
>W1610910026 LSFR01000002 Actinomycetota Tsukamurella tyrosinosolvens [LSFR] 533484 533568 + Tyr GTA [ENA] ¡û
>W1610919514 LSRE01000050 Actinomycetota Tsukamurella pseudospumae [LSRE] 605383 605299 - Tyr GTA [ENA] ¡û
>W1610919558 LSRF01000058 Actinomycetota Tsukamurella pseudospumae [LSRF] 668545 668629 + Tyr GTA [ENA] ¡û
>W1610919599 LSRG01000014 Actinomycetota Tsukamurella tyrosinosolvens [LSRG] 496763 496847 + Tyr GTA [ENA] ¡û
>W1610919760 LSRJ01000011 Actinomycetota Tsukamurella tyrosinosolvens [LSRJ] 679323 679407 + Tyr GTA [ENA] ¡û
>W1710534647 FNSA01000003 Actinomycetota Tsukamurella tyrosinosolvens [FNSA] 691934 692018 + Tyr GTA [ENA] ¡û
Identical group No.208528 (3 seq.)
>PL171000302 CP001342 Actinobacteria Pseudarthrobacter chlorophenolicus A6 plasmid:pACHL01 28315 28397 + Tyr GTA [ENA] ¡û
>W08008028 ABKU01000001 Actinomycetota Pseudarthrobacter chlorophenolicus A6 [ABKU] 407119 407201 + Tyr GTA [ENA] ¡û
>W1710527619 FNLE01000002 Actinomycetota Pseudarthrobacter chlorophenolicus [FNLE] 328834 328916 + Tyr GTA [ENA] ¡û
Identical group No.211748 (1 seq.)
>PL171001343 CP018784 Actinobacteria Curtobacterium pusillum AA3 plasmid:pCPAA3 252655 252739 + Tyr GTA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK