tRNA genes clustered and arranged according to each identical group

Alphaproteobacteria

Anticodon = CCA

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.455995 (55 seq.)
>W1710889749 LNBC01000015 Alphaproteobacteria Paracoccus aminovorans [LNBC] 73397 73472 + Trp CCA [ENA] ¡û
>W1711135067 LUYN01000014 Alphaproteobacteria Rhodobacterales bacterium Alpha_01 [LUYN] 19685 19610 - Trp CCA [ENA] ¡û
>W1712104769 NIPZ01000088 Alphaproteobacteria Paracoccus yeei [NIPZ] 59888 59963 + Trp CCA [ENA] ¡û
>C171067783 CP017781 Alphaproteobacteria Rhodobacter sp. LPB0142 [CP017781] 2855884 2855809 - Trp CCA - ¡û
>C171107687 CP020442 Alphaproteobacteria Paracoccus yeei FDAARGOS_252 [CP020442] 1155238 1155163 - Trp CCA - ¡û
>W131158894 AQUO01000001 Alphaproteobacteria Paracoccus sp. N5 [AQUO] 1883049 1883124 + Trp CCA [ENA] ¡û
>C016009 CP000489 Alphaproteobacteria Paracoccus denitrificans PD1222 [CP000489, CP000490] 722941 723016 + Trp CCA [Ensembl] ¡û
>WENV183733614 PJTY01006705 [PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment 1277 1202 - Trp CCA [ENA] ¢þ
>WENV170228404 CEQG01008240 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6475 6400 - Trp CCA [ENA] ¢þ
>WENV170564875 CZPY01000015 [CZPY] metagenome; PAHs-polluted Soil 73397 73472 + Trp CCA [ENA] ¢þ
>WENV170606714 FUWD010716671 [FUWD] metagenome; unknown 26 101 + Trp CCA [ENA] ¢þ
>PL191000038 CP000489 Alphaproteobacteria Paracoccus denitrificans PD1222 plasmid:phage/plasmid primase, P4 family (CP000489) 722941 723016 + Trp CCA [Ensembl] ¡û
>W09103075 AAIT01000032 Alphaproteobacteria Paracoccus denitrificans PD1222 [AAIT] 7114 7039 - Trp CCA [ENA] ¡û
>C181099803 CP024422 Alphaproteobacteria Paracoccus yeei TT13 [CP024422] 669466 669391 - Trp CCA - ¡û
>C181116766 CP025408 Alphaproteobacteria Paracoccus tegillarcae BM15 [CP025408] 2056908 2056983 + Trp CCA - ¡û
>C181190848 CP030239 Alphaproteobacteria Paracoccus mutanolyticus RSP-02 [CP030239] 1147447 1147372 - Trp CCA - ¡û
>C181203387 LN832559 Alphaproteobacteria Paracoccus aminovorans [LN832559] 585601 585676 + Trp CCA - ¡û
>C191073591 CP031078 Alphaproteobacteria Paracoccus yeei CCUG 32053 [CP031078] 2690502 2690427 - Trp CCA - ¡û
>C191134380 CP035090 Alphaproteobacteria Paracoccus denitrificans ATCC 19367 [CP035090, CP035091] 2317340 2317415 + Trp CCA - ¡û
>W141558868 JHWH01000007 Alphaproteobacteria Paracoccus yeei ATCC BAA-599 [JHWH] 152279 152204 - Trp CCA [ENA] ¡û
>W1910547050 FZNM01000001 Alphaproteobacteria Paracoccus sediminis DSM 26170 [FZNM] 168542 168617 + Trp CCA [ENA] ¡û
>W1911397930 NWMQ01000038 Alphaproteobacteria Paracoccus sp. SY [NWMQ] 6952 7027 + Trp CCA [ENA] ¡û
>W1810235967 PPGA01000002 Alphaproteobacteria Paracoccus denitrificans ISTOD1 [PPGA] 292942 293017 + Trp CCA [ENA] ¡û
>W1810445012 PZKF01000047 Alphaproteobacteria Phaeovulum veldkampii DSM 11550 [PZKF] 16862 16787 - Trp CCA [ENA] ¡û
>W1810543584 QDKM01000002 Alphaproteobacteria Pararhodobacter oceanensis AM505 [QDKM] 57579 57654 + Trp CCA [ENA] ¡û
>W1810585300 QFCQ01000001 Alphaproteobacteria Paracoccus thiocyanatus SST [QFCQ] 3729 3804 + Trp CCA [ENA] ¡û
>W1810685685 QKZL01000028 Alphaproteobacteria Palleronia aestuarii DSM 22009 [QKZL] 1318 1243 - Trp CCA [ENA] ¡û
>W1810721653 QNSD01000034 Alphaproteobacteria Rhodobacter sp. 140A [QNSD] 7298 7373 + Trp CCA [ENA] ¡û
>W1810759466 QPJL01000002 Alphaproteobacteria Paracoccus lutimaris CECT 8525 [QPJL] 21140 21065 - Trp CCA [ENA] ¡û
>W1810762330 QPML01000059 Alphaproteobacteria Paracoccus versutus MAL 1HM19 [QPML] 4732 4807 + Trp CCA [ENA] ¡û
>W1810862251 QTUJ01000002 Alphaproteobacteria Paracoccus versutus DSM 17099 [QTUJ] 587331 587406 + Trp CCA [ENA] ¡û
>W1810884875 QUMX01000056 Alphaproteobacteria Paracoccus versutus DSM 582 [QUMX] 5330 5405 + Trp CCA [ENA] ¡û
>C11117048 CP002897 Alphaproteobacteria Paracoccus denitrificans [CP002897] 2919112 2919037 - Trp CCA [Ensembl] ¡û
>W1511325042 JQFU01000066 Alphaproteobacteria Rhodovulum sp. NI22 [JQFU] 806 881 + Trp CCA [ENA] ¡û
>W1511348608 JRKO01000019 Alphaproteobacteria Paracoccus versutus DSM 582 [JRKO] 4792 4867 + Trp CCA [ENA] ¡û
>W1511348666 JRKP01000086 Alphaproteobacteria Paracoccus sanguinis 39524 [JRKP] 1070 995 - Trp CCA [ENA] ¡û
>W1511348680 JRKQ01000010 Alphaproteobacteria Paracoccus sanguinis 5503 [JRKQ] 41159 41084 - Trp CCA [ENA] ¡û
>W1511348755 JRKR01000126 Alphaproteobacteria Paracoccus sanguinis 10990 [JRKR] 1022 947 - Trp CCA [ENA] ¡û
>W1511348782 JRKS01000009 Alphaproteobacteria Paracoccus sphaerophysae HAMBI 3106 [JRKS] 53977 53902 - Trp CCA [ENA] ¡û
>W1511348819 JRKT01000013 Alphaproteobacteria Paracoccus sanguinis 4681 [JRKT] 41044 40969 - Trp CCA [ENA] ¡û
>C161029307 CP010869 Alphaproteobacteria Actibacterium sp. EMB200-NS6 [CP010869] 378275 378350 + Trp CCA [Ensembl] ¡û
>W121060012 AJFB01001406 Alphaproteobacteria Paracoccus denitrificans SD1 [AJFB] 228 153 - Trp CCA [ENA] ¡û
>W1610049849 BBFH01000895 Alphaproteobacteria Paracoccus denitrificans JCM 21484 [BBFH] 711 636 - Trp CCA [ENA] ¡û
>W1610081509 BDDO01000043 Alphaproteobacteria Paenirhodobacter sp. MME-103 [BDDO] 152 227 + Trp CCA [ENA] ¡û
>W1610750127 LNBC01000015 Alphaproteobacteria Paracoccus aminovorans [LNBC] 73397 73472 + Trp CCA [ENA] ¡û
>W1610946187 LUYN01000014 Alphaproteobacteria Rhodobacterales bacterium Alpha_01 [LUYN] 19685 19610 - Trp CCA [ENA] ¡û
>W1710046248 BBFH01000895 Alphaproteobacteria Paracoccus denitrificans JCM 21484 [BBFH] 711 636 - Trp CCA [ENA] ¡û
>W1710080160 BDDO01000043 Alphaproteobacteria Paenirhodobacter sp. MME-103 [BDDO] 152 227 + Trp CCA [ENA] ¡û
>W1710518481 FNEA01000046 Alphaproteobacteria Paracoccus denitrificans [FNEA] 19526 19451 - Trp CCA [ENA] ¡û
>W1710528233 FNNA01000012 Alphaproteobacteria Paracoccus sanguinis [FNNA] 8750 8825 + Trp CCA [ENA] ¡û
>W1710547690 FODE01000015 Alphaproteobacteria Paracoccus alcaliphilus [FODE] 70812 70737 - Trp CCA [ENA] ¡û
>W1710563607 FOPU01000052 Alphaproteobacteria Paracoccus aminovorans [FOPU] 4924 4999 + Trp CCA [ENA] ¡û
>W1710574702 FOYK01000046 Alphaproteobacteria Paracoccus denitrificans [FOYK] 4747 4822 + Trp CCA [ENA] ¡û
>W1710581786 FPKI01000065 Alphaproteobacteria Paracoccus pantotrophus [FPKI] 19246 19171 - Trp CCA [ENA] ¡û
>W1710596209 FTMK01000035 Alphaproteobacteria Paracoccus thiocyanatus [FTMK] 19755 19680 - Trp CCA [ENA] ¡û
Identical group No.463568 (55 seq.)
>W1710991257 LPXN01000158 Alphaproteobacteria Oceanibaculum pacificum [LPXN] 211 286 + Trp CCA [ENA] ¡û
>W1711628171 MPOB01000020 Alphaproteobacteria Oceanibaculum nanhaiense L54-1-50 [MPOB] 251 326 + Trp CCA [ENA] ¡û
>PL171000683 CP007795 Alphaproteobacteria Azospirillum brasilense Az39 plasmid:AbAZ39_p2 52393 52318 - Trp CCA [ENA] ¡û
>PL171000938 CP012916 Alphaproteobacteria Azospirillum brasilense Sp 7 plasmid:ABSP7_p2 806485 806410 - Trp CCA [ENA] ¡û
>PL171001770 HE577329 Alphaproteobacteria Azospirillum brasilense Sp245 sp245 plasmid:AZOBR_p2 272620 272695 + Trp CCA [ENA] ¡û
>W131045458 AMRL01000043 Alphaproteobacteria Oceanibaculum indicum P24 [AMRL] 15508 15433 - Trp CCA [ENA] ¡û
>W131109473 APHV01000270 Alphaproteobacteria Azospirillum brasilense FP2 [APHV] 15479 15554 + Trp CCA [ENA] ¡û
>W131223677 AUCG01000003 Alphaproteobacteria Niveispirillum irakense DSM 11586 [AUCG] 111227 111302 + Trp CCA [ENA] ¡û
>WENV180282727 OBIC01002574 [OBIC] beach sand metagenome; beach sand 2512 2437 - Trp CCA [ENA] ¢þ
>WENV180309517 OBJS01004202 [OBJS] beach sand metagenome; beach sand 706 631 - Trp CCA [ENA] ¢þ
>WENV180368276 OBOF01048912 [OBOF] marine metagenome; ENVO:00002010 135 210 + Trp CCA [ENA] ¢þ
>WENV180393562 OBPQ01080057 [OBPQ] marine metagenome; polypropylene bottle 315 240 - Trp CCA [ENA] ¢þ
>WENV180588455 OCOP01061594 [OCOP] marine metagenome; water 398 470 + Trp CCA [ENA] ¢þ
>WENV180595195 OCPB01041848 [OCPB] marine metagenome; ENVO:00002149 394 319 - Trp CCA [ENA] ¢þ
>WENV181192774 OEPS011023594 [OEPS] soil metagenome; soil 206 131 - Trp CCA [ENA] ¢þ
>W141223561 BADK01000106 Alphaproteobacteria Azospirillum sp. B506 [BADK] 28 103 + Trp CCA [ENA] ¡û
>WENV183725900 PJQF01033406 [PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm 362 437 + Trp CCA [ENA] ¢þ
>WENV183735044 PJUA01000556 [PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment 314 389 + Trp CCA [ENA] ¢þ
>WENV183736387 PJUC01001698 [PJUC] soil metagenome; Soil enriched on filter paper 3865 3790 - Trp CCA [ENA] ¢þ
>WENV170680890 LFEF01030955 [LFEF] freshwater metagenome; waterbloom 2840 2765 - Trp CCA [ENA] ¢þ
>WENV170771809 LXNI01004385 [LXNI] sponge metagenome; marine sponge reef 290 365 + Trp CCA [ENA] ¢þ
>WENV170774637 LXNJ01051894 [LXNJ] sponge metagenome; marine sponge reef 266 341 + Trp CCA [ENA] ¢þ
>WENV170902406 MDTD01184821 [MDTD] marine metagenome; seawater 5436 5361 - Trp CCA [ENA] ¢þ
>WENV170959360 MKWU01004495 [MKWU] sponge metagenome; 16129 16054 - Trp CCA [ENA] ¢þ
>PL191000275 CP022363 Alphaproteobacteria Azospirillum sp. TSH58 plasmid:TSH58_p03 (CP022363) 613601 613526 - Trp CCA [ENA] ¡û
>PL191000967 CP032323 Alphaproteobacteria Azospirillum brasilense MTCC4035 plasmid:p2 (CP032323) 112298 112373 + Trp CCA [ENA] ¡û
>PL191001009 CP032341 Alphaproteobacteria Azospirillum brasilense MTCC4038 plasmid:p2 (CP032341) 242156 242231 + Trp CCA [ENA] ¡û
>PL191001061 CP032347 Alphaproteobacteria Azospirillum brasilense MTCC4039 plasmid:p2 (CP032347) 78789 78714 - Trp CCA [ENA] ¡û
>C181177424 CP029353 Alphaproteobacteria Azospirillum thermophilum CFH 70021 [CP029352, CP029353, CP029354, CP029355] 902703 902778 + Trp CCA - ¡û
>C181185924 CP029829 Alphaproteobacteria Azospirillum ramasamyi M2T2B2 [CP029829] 337094 337169 + Trp CCA - ¡û
>W141520297 JGVN01000003 Alphaproteobacteria Azospirillum argentinense brasilense [JGVN] 625433 625358 - Trp CCA [ENA] ¡û
>C191170695 CP039634 Alphaproteobacteria Azospirillum sp. TSH100 [CP039634, CP039635, CP039636, CP039637, CP039638, CP039639] 1425255 1425330 + Trp CCA - ¡û
>C191170812 CP039650 Alphaproteobacteria Azospirillum sp. TSA2s TSA2S [CP039642, CP039645, CP039646, CP039647, CP039648, CP039649, CP039650] 1731487 1731562 + Trp CCA - ¡û
>W1910545514 FZLR01000013 Alphaproteobacteria Rhodospirillaceae bacterium Spongia-Bin9 [FZLR] 217 292 + Trp CCA [ENA] ¡û
>W1910548170 FZOI01000003 Alphaproteobacteria Azospirillum sp. RU38E [FZOI] 272440 272365 - Trp CCA [ENA] ¡û
>W1910548552 FZOP01000003 Alphaproteobacteria Azospirillum sp. RU37A [FZOP] 272440 272365 - Trp CCA [ENA] ¡û
>W1910612957 LGQT01000160 Alphaproteobacteria Azospirillum sp. TSH7 [LGQT] 273 348 + Trp CCA [ENA] ¡û
>W1910613021 LGQU01000169 Alphaproteobacteria Azospirillum sp. TSH20 [LGQU] 279 354 + Trp CCA [ENA] ¡û
>W1910613034 LGQV01000022 Alphaproteobacteria Azospirillum sp. TSH58 [LGQV] 16072 16147 + Trp CCA [ENA] ¡û
>W1910613203 LGQX01000100 Alphaproteobacteria Azospirillum sp. TSH100 [LGQX] 271 346 + Trp CCA [ENA] ¡û
>W1910613302 LGQZ01000131 Alphaproteobacteria Azospirillum sp. TSO22-1 [LGQZ] 16289 16214 - Trp CCA [ENA] ¡û
>W1910613415 LGRK01000056 Alphaproteobacteria Azospirillum sp. Sp 7 [LGRK] 140254 140179 - Trp CCA [ENA] ¡û
>W1911138098 NOWT01000010 Alphaproteobacteria Azospirillum brasilense 2A1 [NOWT] 27252 27327 + Trp CCA [ENA] ¡û
>W1911768752 QXHE01000005 Alphaproteobacteria Azospirillum brasilense SR80 [QXHE] 35958 35883 - Trp CCA [ENA] ¡û
>W1810222236 POQV01000003 Alphaproteobacteria Azospirillum brasilense Ab-V5 [POQV] 148328 148403 + Trp CCA [ENA] ¡û
>W1810223542 POTD01000007 Alphaproteobacteria Azospirillum brasilense Ab-V6 [POTD] 148115 148190 + Trp CCA [ENA] ¡û
>W1810226097 POWG01000019 Alphaproteobacteria Azospirillum argentinense REC3 [POWG] 75415 75340 - Trp CCA [ENA] ¡û
>W1810692550 QLKQ01000003 Alphaproteobacteria Azospirillum brasilense HAMBI_3172 [QLKQ] 114736 114811 + Trp CCA [ENA] ¡û
>C10101250 AP010946 Alphaproteobacteria Azospirillum sp. B510 [AP010946] 648712 648787 + Trp CCA [Ensembl] ¡û
>C121016576 FQ311868 Alphaproteobacteria Azospirillum lipoferum 4B [FQ311868] 418092 418167 + Trp CCA [Ensembl] ¡û
>C161085677 CP015285 Alphaproteobacteria Azospirillum humicireducens SgZ-5 [CP015285] 395844 395919 + Trp CCA [Ensembl] ¡û
>W1610845929 LPXN01000158 Alphaproteobacteria Oceanibaculum pacificum [LPXN] 211 286 + Trp CCA [ENA] ¡û
>W1710607918 FXAK01000007 Alphaproteobacteria Azospirillum oryzae [FXAK] 635265 635340 + Trp CCA [ENA] ¡û
>W1710626710 JPIR01000065 Alphaproteobacteria Azospirillum brasilense [JPIR] 28924 28849 - Trp CCA [ENA] ¡û
>W1710626799 JPIS01000150 Alphaproteobacteria Azospirillum brasilense [JPIS] 1537 1612 + Trp CCA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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