tRNA genes clustered and arranged according to each identical group

Alphaproteobacteria

Anticodon = CGA

HIT: 5 Group(s).

Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.7068 (1 seq.)
>PL171001241	CP016463	Alphaproteobacteria	Bosea sp. RAC05 plasmid:pBSY19_1	470544	470637	+	Ser	CGA	[ENA]	○
Identical group No.16729 (1 seq.)
>PL173000153	CP016463	Alphaproteobacteria	Bosea sp. RAC05 plasmid:pBSY19_1	470374	470465	+	Ser	CGA	[ENA]	○
Identical group No.31938 (21 seq.)
>W1710785270	LJHS01000012	Alphaproteobacteria	Rhizobium sp. AAP43 [LJHS]	296202	296113	-	Ser	CGA	[ENA]	○
>W1710785675	LJIB01000025	Alphaproteobacteria	Rhizobium sp. AAP116 [LJIB]	24858	24947	+	Ser	CGA	[ENA]	○
>W1710861528	LMDR01000008	Alphaproteobacteria	Rhizobium sp. Root1240 [LMDR]	101736	101825	+	Ser	CGA	[ENA]	○
>W1710868579	LMJE01000008	Alphaproteobacteria	Rhizobium sp. Root274 [LMJE]	101711	101800	+	Ser	CGA	[ENA]	○
>W131036187	ALJF01000009	Alphaproteobacteria	Agrobacterium albertimagni AOL15 [ALJF]	46382	46293	-	Ser	CGA	[ENA]	○
>W1711384742	MEDI01000795	Alphaproteobacteria	Kaistia sp. SCN 65-12 [MEDI]	18	107	+	Ser	CGA	[ENA]	○
>PL171001256	CP016500	Alphaproteobacteria	Agrobacterium sp. RAC06 plasmid:pBSY240_1	107625	107714	+	Ser	CGA	[ENA]	○
>WENV180022143	FTFQ01000265	[FTFQ] metagenome; soil		1120	1031	-	Ser	CGA	[ENA]	◯
>WENV180031375	FTJO01038200	[FTJO] metagenome; soil		871	960	+	Ser	CGA	[ENA]	◯
>WENV181414332	OGCL01000223	[OGCL] hot springs metagenome; Hot spring water		62348	62437	+	Ser	CGA	[ENA]	◯
>WENV181416134	OGCL01054986	[OGCL] hot springs metagenome; Hot spring water		786	875	+	Ser	CGA	[ENA]	◯
>WENV170680695	LFEF01011152	[LFEF] freshwater metagenome; waterbloom		6354	6265	-	Ser	CGA	[ENA]	◯
>WENV171003569	NNBU01000546	[NNBU] plant metagenome; symbiotic tissue sample KVJ2		68856	68945	+	Ser	CGA	[ENA]	◯
>C181051581	CP021371	Alphaproteobacteria	Rhizobium sp. ACO-34A [CP021371]	4582466	4582555	+	Ser	CGA	-	○
>W1810195492	PKRP01000001	Alphaproteobacteria	Rhizobium sp. TH135 [PKRP]	7065	6976	-	Ser	CGA	[ENA]	○
>W1810670691	QJRY01000001	Alphaproteobacteria	Rhizobium wuzhouense W44 [QJRY]	864435	864524	+	Ser	CGA	[ENA]	○
>W1810670706	QJRY01000003	Alphaproteobacteria	Rhizobium wuzhouense W44 [QJRY]	404242	404153	-	Ser	CGA	[ENA]	○
>W1610649076	LJHS01000012	Alphaproteobacteria	Rhizobium sp. AAP43 [LJHS]	296202	296113	-	Ser	CGA	[ENA]	○
>W1610649481	LJIB01000025	Alphaproteobacteria	Rhizobium sp. AAP116 [LJIB]	24858	24947	+	Ser	CGA	[ENA]	○
>W1610723874	LMDR01000008	Alphaproteobacteria	Rhizobium sp. Root1240 [LMDR]	101736	101825	+	Ser	CGA	[ENA]	○
>W1610730925	LMJE01000008	Alphaproteobacteria	Rhizobium sp. Root274 [LMJE]	101711	101800	+	Ser	CGA	[ENA]	○
Identical group No.32398 (72 seq.)
>W1711294782	MABH01000164	Alphaproteobacteria	Cereibacter johrii [MABH]	37370	37281	-	Ser	CGA	[ENA]	○
>W1711642900	MPZR01000011	Alphaproteobacteria	Thioclava sp. F36-7 [MPZR]	76911	76822	-	Ser	CGA	[ENA]	○
>W1711642971	MPZT01000003	Alphaproteobacteria	Thioclava sp. DLFJ4-1 [MPZT]	586306	586395	+	Ser	CGA	[ENA]	○
>W1711643074	MPZV01000003	Alphaproteobacteria	Thioclava sediminum TAW-CT134 [MPZV]	64517	64428	-	Ser	CGA	[ENA]	○
>W1711643163	MPZX01000003	Alphaproteobacteria	Thioclava sp. F36-6 [MPZX]	554717	554806	+	Ser	CGA	[ENA]	○
>W1711947183	NBNX01000001	Alphaproteobacteria	Thioclava sp. IC9 [NBNX]	702894	702983	+	Ser	CGA	[ENA]	○
>W1711947229	NBNY01000001	Alphaproteobacteria	Thioclava sp. F1Mire-8 [NBNY]	695740	695829	+	Ser	CGA	[ENA]	○
>W1711947317	NBOA01000001	Alphaproteobacteria	Thioclava sp. F34-6 [NBOA]	623927	624016	+	Ser	CGA	[ENA]	○
>W1711947370	NBOB01000001	Alphaproteobacteria	Thioclava sp. JM3 [NBOB]	85053	84964	-	Ser	CGA	[ENA]	○
>W1711959001	NBXF01000006	Alphaproteobacteria	Thioclava electrotropha ElOx9 [NBXF]	160659	160570	-	Ser	CGA	[ENA]	○
>PL171000285	CP000662	Alphaproteobacteria	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01	697867	697778	-	Ser	CGA	[Ensembl]	○
>C171037031	CP015211	Alphaproteobacteria	Cereibacter sphaeroides MBTLJ-13 [CP015210, CP015211]	15083	14994	-	Ser	CGA	-	○
>C171064532	CP017622	Alphaproteobacteria	Ketogulonicigenium vulgare SPU B805 [CP017622]	1388073	1388162	+	Ser	CGA	-	○
>C171067795	CP017781	Alphaproteobacteria	Rhodobacter sp. LPB0142 [CP017781]	1817186	1817097	-	Ser	CGA	-	○
>C171094369	CP019437	Alphaproteobacteria	Thioclava nitratireducens 25B10_4 [CP019437]	2082095	2082006	-	Ser	CGA	-	○
>C171101169	CP019937	Alphaproteobacteria	Ketogulonicigenium robustum SPU_B003 [CP019937]	1260008	1259919	-	Ser	CGA	-	○
>W131058664	ANFS01000059	Alphaproteobacteria	Rhodobacter sp. AKP1 [ANFS]	18362	18451	+	Ser	CGA	[ENA]	○
>C019256	CP000144	Alphaproteobacteria	Cereibacter sphaeroides 2.4.1 [CP000143, CP000144]	15083	14994	-	Ser	CGA	[Ensembl]	○
>C019349	CP000578	Alphaproteobacteria	Cereibacter sphaeroides ATCC 17029 [CP000577, CP000578]	592951	592862	-	Ser	CGA	[Ensembl]	○
>WENV180014058	FPIC01038840	[FPIC] soil metagenome; Soil		302	391	+	Ser	CGA	[ENA]	◯
>WENV180232436	OBCO01000432	[OBCO] synthetic metagenome; purchased from BEI Resources HM-276D		18419	18508	+	Ser	CGA	[ENA]	◯
>WENV180233384	OBCP01000433	[OBCP] synthetic metagenome; purchased from BEI Resources HM-276D		18419	18508	+	Ser	CGA	[ENA]	◯
>w001247	AAAE01000111	Alphaproteobacteria	Cereibacter sphaeroides [AAAE]	10175	10084	-	Ser	CGA	[ENA]	○
>WENV180569873	OCLR01000637	[OCLR] synthetic metagenome; purchased from BEI Resources HM-276D		18419	18508	+	Ser	CGA	[ENA]	◯
>WENV180570769	OCLS01000535	[OCLS] synthetic metagenome; purchased from BEI Resources HM-276D		18419	18508	+	Ser	CGA	[ENA]	◯
>WENV180571759	OCLT01000421	[OCLT] synthetic metagenome; purchased from BEI Resources HM-276D		18419	18508	+	Ser	CGA	[ENA]	◯
>WENV180574011	OCLW01000434	[OCLW] synthetic metagenome; purchased from BEI Resources HM-276D		18923	19012	+	Ser	CGA	[ENA]	◯
>WENV180640068	OCRL01000419	[OCRL] synthetic metagenome; purchased from BEI Resources HM-276D		18419	18508	+	Ser	CGA	[ENA]	◯
>WENV180641029	OCRM01000445	[OCRM] synthetic metagenome; purchased from BEI Resources HM-276D		18419	18508	+	Ser	CGA	[ENA]	◯
>W141082497	AUNB01000014	Alphaproteobacteria	Thioclava indica DT23-4 [AUNB]	69007	69096	+	Ser	CGA	[ENA]	○
>WENV170604214	FUWD010374337	[FUWD] metagenome; unknown		503	414	-	Ser	CGA	[ENA]	◯
>WENV170705290	LLEQ01003405	[LLEQ] bioreactor metagenome; day86 25degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the		942	853	-	Ser	CGA	[ENA]	◯
>WENV170809726	MDSW01137074	[MDSW] marine metagenome; seawater		9079	9168	+	Ser	CGA	[ENA]	◯
>C181017263	CP015288	Alphaproteobacteria	Cereibacter sphaeroides MBTLJ-20 [CP015287, CP015288]	15083	14994	-	Ser	CGA	-	○
>C181084435	CP023548	Alphaproteobacteria	Rhodobacter sp. CZR27 [CP023548]	252588	252499	-	Ser	CGA	-	○
>C181191148	CP030272	Alphaproteobacteria	Cereibacter sphaeroides 2.4.1 [CP030271, CP030272]	15083	14994	-	Ser	CGA	-	○
>C191079683	CP031751	Alphaproteobacteria	Cereibacter sphaeroides EBL0706 [CP031750, CP031751]	656156	656067	-	Ser	CGA	-	○
>W09104747	AAME01000053	Alphaproteobacteria	Cereibacter sphaeroides ATCC 17025 [AAME]	2697	2786	+	Ser	CGA	[ENA]	○
>W09104798	AAMF01000015	Alphaproteobacteria	Cereibacter sphaeroides ATCC 17029 [AAMF]	19278	19367	+	Ser	CGA	[ENA]	○
>C191151038	CP036420	Alphaproteobacteria	Cereibacter sphaeroides HJ [CP036419, CP036420]	1167385	1167296	-	Ser	CGA	-	○
>W141531711	JHEH01000008	Alphaproteobacteria	Thioclava dalianensis [JHEH]	7398	7309	-	Ser	CGA	[ENA]	○
>W1910548886	FZOV01000015	Alphaproteobacteria	Cereibacter sphaeroides DSM 18937 [FZOV]	18409	18498	+	Ser	CGA	[ENA]	○
>W1910574845	JQHS01000004	Alphaproteobacteria	Falsirhodobacter deserti W402 [JQHS]	309224	309313	+	Ser	CGA	[ENA]	○
>C09109094	CP001151	Alphaproteobacteria	Cereibacter sphaeroides KD131 KD131; KCTC 12085 [CP001150, CP001151]	39937	39848	-	Ser	CGA	[Ensembl]	○
>W1911491946	OAOQ01000031	Alphaproteobacteria	Cereibacter ovatus JA234 [OAOQ]	724	635	-	Ser	CGA	[ENA]	○
>W1911495131	OBMP01000012	Alphaproteobacteria	Rhodobacter sp. JA431 [OBMP]	30105	30194	+	Ser	CGA	[ENA]	○
>W1911495369	OBMT01000009	Alphaproteobacteria	Rhodobacter maris JA276 [OBMT]	153638	153727	+	Ser	CGA	[ENA]	○
>W1911575832	PDJO01000001	Alphaproteobacteria	Thioclava sp. ES.031 [PDJO]	1826190	1826101	-	Ser	CGA	[ENA]	○
>W1911749468	QWGP01000042	Alphaproteobacteria	Cereibacter sphaeroides FY [QWGP]	9112	9023	-	Ser	CGA	[ENA]	○
>W1911766300	QXDK01000036	Alphaproteobacteria	Cereibacter sphaeroides SCJ [QXDK]	1340	1251	-	Ser	CGA	[ENA]	○
>W1810119967	PHSI01000102	Alphaproteobacteria	Cereibacter azotoformans YLK20 [PHSI]	17945	18034	+	Ser	CGA	[ENA]	○
>W1810444976	PZKF01000003	Alphaproteobacteria	Phaeovulum veldkampii DSM 11550 [PZKF]	34012	33923	-	Ser	CGA	[ENA]	○
>W1810445056	PZKG01000158	Alphaproteobacteria	Cereibacter changlensis JA139 [PZKG]	962	1051	+	Ser	CGA	[ENA]	○
>W1810463843	PZZW01000006	Alphaproteobacteria	Cereibacter johrii JA192 [PZZW]	19159	19248	+	Ser	CGA	[ENA]	○
>W1810477389	QAOT01000032	Alphaproteobacteria	Cereibacter azotoformans KA25 [QAOT]	8502	8413	-	Ser	CGA	[ENA]	○
>W1810486278	QAXT01000010	Alphaproteobacteria	Rhodobacter aestuarii JA296 [QAXT]	24103	24014	-	Ser	CGA	[ENA]	○
>W1810584542	QFBB01000011	Alphaproteobacteria	Thioclava sp. NG1 [QFBB]	56858	56947	+	Ser	CGA	[ENA]	○
>W1810686008	QKZS01000013	Alphaproteobacteria	Cereibacter changlensis DSM 18774 [QKZS]	80479	80390	-	Ser	CGA	[ENA]	○
>W1810699124	QMCC01000013	Alphaproteobacteria	Cereibacter johrii CDR-SL 7Cii [QMCC]	19126	19215	+	Ser	CGA	[ENA]	○
>W1810785209	QRBG01000040	Alphaproteobacteria	Cereibacter sphaeroides f. sp. denitrificans IL106 [QRBG]	152785	152696	-	Ser	CGA	[ENA]	○
>SRA1052972	SRR035098.310125	454 Sequencing (SRP001819)		53	142	+	Ser	CGA	[SRA]
>C11111800	CP002018	Alphaproteobacteria	Ketogulonicigenium vulgare WSH-001 [CP002018]	843630	843719	+	Ser	CGA	[Ensembl]	○
>C11111866	CP002224	Alphaproteobacteria	Ketogulonicigenium vulgare Y25 [CP002224]	1249083	1249172	+	Ser	CGA	[Ensembl]	○
>W11160210	AFER01000002	Alphaproteobacteria	Cereibacter sphaeroides WS8N [AFER]	210159	210070	-	Ser	CGA	[ENA]	○
>C161047257	CP012908	Alphaproteobacteria	Ketogulonicigenium vulgare Hbe602 [CP012908]	1234010	1234099	+	Ser	CGA	-	○
>C161048391	CP012961	Alphaproteobacteria	Cereibacter sphaeroides MBTLJ-8 [CP012960, CP012961]	15083	14994	-	Ser	CGA	-	○
>C161099984	CP016592	Alphaproteobacteria	Ketogulonicigenium vulgare SKV [CP016592]	1233831	1233920	+	Ser	CGA	-	○
>W121076818	AKBU01000002	Alphaproteobacteria	Cereibacter sphaeroides 2.4.1 [AKBU]	151390	151301	-	Ser	CGA	[ENA]	○
>W121102162	AKVW01000002	Alphaproteobacteria	Cereibacter sphaeroides 2.4.1 [AKVW]	15083	14994	-	Ser	CGA	[ENA]	○
>WENV078288	AAFZ01021599	Fossil microbial community from Whale Fall (Santa Cruz Basin)		486	577	+	Ser	CGA	[ENA]
>W1710570325	FOVB01000006	Alphaproteobacteria	Thioclava dalianensis [FOVB]	237433	237522	+	Ser	CGA	[ENA]	○
>W1710598839	FTOG01000012	Alphaproteobacteria	Rhodobacter aestuarii [FTOG]	24103	24014	-	Ser	CGA	[ENA]	○
Identical group No.38174 (2 seq.)
>PL173000054	CP001511	Alphaproteobacteria	Methylobacterium extorquens AM1 plasmid:megaplasmid	1013193	1013282	+	Ser	CGA	[ENA]	○
>W123000323	AGJK01000001	Alphaproteobacteria	Methylorubrum extorquens DSM 13060 [AGJK]	90621	90532	-	Ser	CGA	[ENA]	○