tRNA genes clustered and arranged according to each identical group

Alphaproteobacteria

Anticodon = GCT

HIT: 7 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.8306 (20 seq.)
>W131109472 APHV01000248 Alphaproteobacteria Azospirillum brasilense FP2 [APHV] 5092 5185 + Ser GCT [ENA] ¡û
>PL171000674 CP007794 Alphaproteobacteria Azospirillum brasilense Az39 plasmid:AbAZ39_p1 972119 972026 - Ser GCT [ENA] ¡û
>PL171000925 CP012915 Alphaproteobacteria Azospirillum brasilense Sp 7 plasmid:ABSP7_p1 1172397 1172304 - Ser GCT [ENA] ¡û
>PL171001760 HE577328 Alphaproteobacteria Azospirillum brasilense Sp245 sp245 plasmid:AZOBR_p1 1397194 1397287 + Ser GCT [ENA] ¡û
>WENV183727321 PJTO01027443 [PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment 66 159 + Ser GCT [ENA] ¢þ
>PL191000305 CP022367 Alphaproteobacteria Azospirillum sp. TSH58 plasmid:TSH58_p02 (CP022367) 1691795 1691888 + Ser GCT [ENA] ¡û
>PL191000941 CP032322 Alphaproteobacteria Azospirillum brasilense MTCC4035 plasmid:p1 (CP032322) 160695 160788 + Ser GCT [ENA] ¡û
>PL191000993 CP032340 Alphaproteobacteria Azospirillum brasilense MTCC4038 plasmid:p1 (CP032340) 960009 960102 + Ser GCT [ENA] ¡û
>PL191001032 CP032346 Alphaproteobacteria Azospirillum brasilense MTCC4039 plasmid:p1 (CP032346) 151789 151882 + Ser GCT [ENA] ¡û
>W141520282 JGVN01000002 Alphaproteobacteria Azospirillum argentinense brasilense [JGVN] 1045950 1046043 + Ser GCT [ENA] ¡û
>W1910613056 LGQV01000085 Alphaproteobacteria Azospirillum sp. TSH58 [LGQV] 55350 55257 - Ser GCT [ENA] ¡û
>W1910613409 LGRK01000044 Alphaproteobacteria Azospirillum sp. Sp 7 [LGRK] 166002 166095 + Ser GCT [ENA] ¡û
>W1911138107 NOWT01000021 Alphaproteobacteria Azospirillum brasilense 2A1 [NOWT] 67694 67601 - Ser GCT [ENA] ¡û
>W1911768745 QXHE01000002 Alphaproteobacteria Azospirillum brasilense SR80 [QXHE] 113224 113317 + Ser GCT [ENA] ¡û
>W1810222253 POQV01000006 Alphaproteobacteria Azospirillum brasilense Ab-V5 [POQV] 70945 70852 - Ser GCT [ENA] ¡û
>W1810223537 POTD01000005 Alphaproteobacteria Azospirillum brasilense Ab-V6 [POTD] 70945 70852 - Ser GCT [ENA] ¡û
>W1810226077 POWG01000006 Alphaproteobacteria Azospirillum argentinense REC3 [POWG] 7605 7512 - Ser GCT [ENA] ¡û
>W1810692551 QLKQ01000006 Alphaproteobacteria Azospirillum brasilense HAMBI_3172 [QLKQ] 75436 75529 + Ser GCT [ENA] ¡û
>W1710626703 JPIR01000041 Alphaproteobacteria Azospirillum brasilense [JPIR] 7794 7701 - Ser GCT [ENA] ¡û
>W1710626752 JPIS01000022 Alphaproteobacteria Azospirillum brasilense [JPIS] 70639 70546 - Ser GCT [ENA] ¡û
Identical group No.13173 (17 seq.)
>PL171000027 AP010947 Alphaproteobacteria Azospirillum sp. B510 plasmid:pAB510a 355389 355481 + Ser GCT [ENA] ¡û
>PL171001714 FQ311869 Alphaproteobacteria Azospirillum lipoferum 4B plasmid:AZO_p1 291588 291680 + Ser GCT [ENA] ¡û
>WENV183734984 PJUA01000322 [PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment 11033 11125 + Ser GCT [ENA] ¢þ
>WENV183736526 PJUC01008864 [PJUC] soil metagenome; Soil enriched on filter paper 685 593 - Ser GCT [ENA] ¢þ
>PL191000749 CP029830 Alphaproteobacteria Azospirillum sp. M2T2B2 plasmid:unnamed1 (CP029830) 761023 761115 + Ser GCT [ENA] ¡û
>C191170733 CP039635 Alphaproteobacteria Azospirillum sp. TSH100 [CP039634, CP039635, CP039636, CP039637, CP039638, CP039639] 313581 313489 - Ser GCT - ¡û
>C191170789 CP039649 Alphaproteobacteria Azospirillum sp. TSA2s TSA2S [CP039642, CP039645, CP039646, CP039647, CP039648, CP039649, CP039650] 711957 711865 - Ser GCT - ¡û
>W1910612849 LGQS01000028 Alphaproteobacteria Azospirillum sp. TSA6c [LGQS] 3956460 3956552 + Ser GCT [ENA] ¡û
>W1910612940 LGQT01000060 Alphaproteobacteria Azospirillum sp. TSH7 [LGQT] 10986 11078 + Ser GCT [ENA] ¡û
>W1910613010 LGQU01000138 Alphaproteobacteria Azospirillum sp. TSH20 [LGQU] 10992 11084 + Ser GCT [ENA] ¡û
>W1910613109 LGQW01000015 Alphaproteobacteria Azospirillum sp. TSH64 [LGQW] 4082267 4082359 + Ser GCT [ENA] ¡û
>W1910613190 LGQX01000063 Alphaproteobacteria Azospirillum sp. TSH100 [LGQX] 10796 10888 + Ser GCT [ENA] ¡û
>W1910613232 LGQY01000063 Alphaproteobacteria Azospirillum sp. TSO5 [LGQY] 45171 45263 + Ser GCT [ENA] ¡û
>W1810058910 PDKW01000041 Alphaproteobacteria Azospirillum palustre B2 [PDKW] 277476 277568 + Ser GCT [ENA] ¡û
>W1511564944 LAEL01000004 Alphaproteobacteria Azospirillum thiophilum DSM 21654 [LAEL] 178396 178304 - Ser GCT [ENA] ¡û
>C161041931 CP012403 Alphaproteobacteria Azospirillum thiophilum BV-S [CP012401, CP012402, CP012403, CP012404, CP012405, CP012406, CP012407, CP012408] 376745 376653 - Ser GCT - ¡û
>W1710607893 FXAK01000002 Alphaproteobacteria Azospirillum oryzae [FXAK] 466981 466889 - Ser GCT [ENA] ¡û
Identical group No.21761 (10 seq.)
>W1711434813 MINO01000013 Alphaproteobacteria Sphingobium phenoxybenzoativorans [MINO] 76351 76442 + Ser GCT [ENA] ¡û
>PL171001290 CP017076 Alphaproteobacteria Novosphingobium resinovorum SA1 plasmid:pSA1 749405 749496 + Ser GCT [ENA] ¡û
>W131160225 AQWK01000007 Alphaproteobacteria Novosphingobium nitrogenifigens DSM 19370 [AQWK] 33307 33216 - Ser GCT [ENA] ¡û
>W141484956 JFYZ01000023 Alphaproteobacteria Novosphingobium resinovorum [JFYZ] 90737 90828 + Ser GCT [ENA] ¡û
>W1910651516 LYMM01000050 Alphaproteobacteria Novosphingobium guangzhouense SA925 [LYMM] 24782 24691 - Ser GCT [ENA] ¡û
>W11151083 AEWJ01000051 Alphaproteobacteria Novosphingobium nitrogenifigens DSM 19370 [AEWJ] 165818 165909 + Ser GCT [ENA] ¡û
>W121081056 AKFJ01000008 Alphaproteobacteria Novosphingobium sp. Rr 2-17 [AKFJ] 102349 102440 + Ser GCT [ENA] ¡û
>W121119219 ALVC01000053 Alphaproteobacteria Sphingomonas sp. LH128 [ALVC] 20840 20931 + Ser GCT [ENA] ¡û
>W1610590954 LDRW01000001 Alphaproteobacteria Novosphingobium barchaimii [LDRW] 78254 78163 - Ser GCT [ENA] ¡û
>W1710710234 LDRW01000001 Alphaproteobacteria Novosphingobium barchaimii [LDRW] 78254 78163 - Ser GCT [ENA] ¡û
Identical group No.38043 (1 seq.)
>PL171001240 CP016463 Alphaproteobacteria Bosea sp. RAC05 plasmid:pBSY19_1 470268 470358 + Ser GCT [ENA] ¡û
Identical group No.46208 (28 seq.)
>W1711711770 MTBG01000001 Alphaproteobacteria Pseudoruegeria sp. SK021 [MTBG] 93081 92992 - Ser GCT [ENA] ¡û
>W1711798614 MWVJ01000133 Alphaproteobacteria Pseudophaeobacter leonis [MWVJ] 5513 5602 + Ser GCT [ENA] ¡û
>C171047872 CP016364 Alphaproteobacteria Phaeobacter porticola P97 [CP016364] 2955834 2955745 - Ser GCT - ¡û
>WENV180384748 OBOY01036711 [OBOY] marine metagenome; Sterile flask 201 290 + Ser GCT [ENA] ¢þ
>W141082511 AUNB01000049 Alphaproteobacteria Thioclava indica DT23-4 [AUNB] 7353 7442 + Ser GCT [ENA] ¡û
>W141151640 AXBF01000002 Alphaproteobacteria Pseudophaeobacter arcticus DSM 23566 [AXBF] 2934226 2934315 + Ser GCT [ENA] ¡û
>WENV182567063 OJEN01001089 [OJEN] seawater metagenome; Sea water 7318 7229 - Ser GCT [ENA] ¢þ
>WENV182568068 OJEP01024489 [OJEP] seawater metagenome; Sea water 60 149 + Ser GCT [ENA] ¢þ
>WENV182584837 OJHG01015346 [OJHG] seawater metagenome; Sea water 451 362 - Ser GCT [ENA] ¢þ
>WENV182586903 OJHK01011447 [OJHK] seawater metagenome; Sea water 778 689 - Ser GCT [ENA] ¢þ
>WENV170315376 CESO01115604 [CESO] marine metagenome genome assembly TARA_093_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4647 4736 + Ser GCT [ENA] ¢þ
>WENV170385850 CETY01108057 [CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 167 256 + Ser GCT [ENA] ¢þ
>WENV170584107 FUFK010192007 [FUFK] metagenome; unknown 275 364 + Ser GCT [ENA] ¢þ
>WENV170672656 LAZR01000670 [LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment 3775 3864 + Ser GCT [ENA] ¢þ
>WENV170705226 LLEQ01000480 [LLEQ] bioreactor metagenome; day86 25degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the 1706 1795 + Ser GCT [ENA] ¢þ
>WENV170889117 MDTC01269847 [MDTC] marine metagenome; seawater 2240 2151 - Ser GCT [ENA] ¢þ
>WENV170928287 MDTG01131298 [MDTG] marine metagenome; seawater 67 156 + Ser GCT [ENA] ¢þ
>PL191001394 CP039965 Alphaproteobacteria Pseudorhodobacter sp. S12M18 plasmid:unnamed1 (CP039965) 781721 781810 + Ser GCT [ENA] ¡û
>C181123335 CP025804 Alphaproteobacteria Sulfitobacter sp. SK012 [CP025804] 1053455 1053544 + Ser GCT - ¡û
>W141531735 JHEH01000074 Alphaproteobacteria Thioclava dalianensis [JHEH] 4147 4236 + Ser GCT [ENA] ¡û
>W09112273 ABXS01000041 Alphaproteobacteria Roseobacter sp. GAI101 [ABXS] 82898 82809 - Ser GCT [ENA] ¡û
>W1910005003 AWWI01000060 Alphaproteobacteria Puniceibacterium antarcticum SM1211 [AWWI] 97472 97561 + Ser GCT [ENA] ¡û
>W1911696528 QMEJ01000006 Alphaproteobacteria Tropicimonas sp. IMCC34011 [QMEJ] 72891 72980 + Ser GCT [ENA] ¡û
>W1911696571 QMEK01000003 Alphaproteobacteria Tropicimonas sp. IMCC34043 [QMEK] 124611 124522 - Ser GCT [ENA] ¡û
>W1610092733 CYSA01000027 Alphaproteobacteria Thalassovita gelatinovora gelatinovorus [CYSA] 219078 219167 + Ser GCT [ENA] ¡û
>W1710095988 CYSA01000027 Alphaproteobacteria Thalassovita gelatinovora gelatinovorus [CYSA] 219078 219167 + Ser GCT [ENA] ¡û
>W1710551176 FOFW01000004 Alphaproteobacteria Thalassovita gelatinovora gelatinovorus [FOFW] 348041 348130 + Ser GCT [ENA] ¡û
>W1710570326 FOVB01000006 Alphaproteobacteria Thioclava dalianensis [FOVB] 87892 87803 - Ser GCT [ENA] ¡û
Identical group No.46257 (35 seq.)
>W1710853401 LLWQ01000104 Alphaproteobacteria Paracoccus sp. MKU1 [LLWQ] 2847 2936 + Ser GCT [ENA] ¡û
>W1710889748 LNBC01000014 Alphaproteobacteria Paracoccus aminovorans [LNBC] 124423 124334 - Ser GCT [ENA] ¡û
>W131158909 AQUO01000001 Alphaproteobacteria Paracoccus sp. N5 [AQUO] 1667176 1667087 - Ser GCT [ENA] ¡û
>C016006 CP000489 Alphaproteobacteria Paracoccus denitrificans PD1222 [CP000489, CP000490] 361057 361146 + Ser GCT [Ensembl] ¡û
>W141216647 AZVA01000039 Alphaproteobacteria Paracoccus sp. J55 [AZVA] 18448 18359 - Ser GCT [ENA] ¡û
>W141277370 JAEN01000018 Alphaproteobacteria Paracoccus sp. J39 [JAEN] 11780 11869 + Ser GCT [ENA] ¡û
>WENV170277954 CERQ01040533 [CERQ] marine metagenome genome assembly TARA_065_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 887 798 - Ser GCT [ENA] ¢þ
>WENV170371066 CETR01234335 [CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 590 679 + Ser GCT [ENA] ¢þ
>WENV170477869 CEVJ01165520 [CEVJ] marine metagenome genome assembly TARA_146_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 657 746 + Ser GCT [ENA] ¢þ
>WENV170482678 CEVM01050922 [CEVM] marine metagenome genome assembly TARA_145_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 229 140 - Ser GCT [ENA] ¢þ
>WENV170487700 CEVO01082894 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1070 1159 + Ser GCT [ENA] ¢þ
>WENV170564874 CZPY01000014 [CZPY] metagenome; PAHs-polluted Soil 124423 124334 - Ser GCT [ENA] ¢þ
>PL191000035 CP000489 Alphaproteobacteria Paracoccus denitrificans PD1222 plasmid:phage/plasmid primase, P4 family (CP000489) 361057 361146 + Ser GCT [Ensembl] ¡û
>W09103050 AAIT01000005 Alphaproteobacteria Paracoccus denitrificans PD1222 [AAIT] 305403 305314 - Ser GCT [ENA] ¡û
>C191134377 CP035090 Alphaproteobacteria Paracoccus denitrificans ATCC 19367 [CP035090, CP035091] 1955456 1955545 + Ser GCT - ¡û
>W1810235994 PPGA01000010 Alphaproteobacteria Paracoccus denitrificans ISTOD1 [PPGA] 54890 54801 - Ser GCT [ENA] ¡û
>W1810385282 PXNQ01000013 Alphaproteobacteria Paracoccus methylarcula VKM B-2159 [PXNQ] 94994 94905 - Ser GCT [ENA] ¡û
>W1810585319 QFCQ01000049 Alphaproteobacteria Paracoccus thiocyanatus SST [QFCQ] 13237 13326 + Ser GCT [ENA] ¡û
>W1810697139 QLUV01000019 Alphaproteobacteria Paracoccus endophyticus SYSUP0003 [QLUV] 15864 15775 - Ser GCT [ENA] ¡û
>W1810762309 QPML01000011 Alphaproteobacteria Paracoccus versutus MAL 1HM19 [QPML] 43921 44010 + Ser GCT [ENA] ¡û
>W1810862245 QTUJ01000002 Alphaproteobacteria Paracoccus versutus DSM 17099 [QTUJ] 198806 198895 + Ser GCT [ENA] ¡û
>W1810884852 QUMX01000009 Alphaproteobacteria Paracoccus versutus DSM 582 [QUMX] 93655 93744 + Ser GCT [ENA] ¡û
>W1511348572 JRKN01000036 Alphaproteobacteria Paracoccus halophilus JCM 14014 [JRKN] 27128 27217 + Ser GCT [ENA] ¡û
>W1511348590 JRKO01000003 Alphaproteobacteria Paracoccus versutus DSM 582 [JRKO] 93836 93925 + Ser GCT [ENA] ¡û
>W1610716525 LLWQ01000104 Alphaproteobacteria Paracoccus sp. MKU1 [LLWQ] 2847 2936 + Ser GCT [ENA] ¡û
>W1610750126 LNBC01000014 Alphaproteobacteria Paracoccus aminovorans [LNBC] 124423 124334 - Ser GCT [ENA] ¡û
>W1710508109 FMVT01000018 Alphaproteobacteria Paracoccus tibetensis [FMVT] 727 638 - Ser GCT [ENA] ¡û
>W1710518466 FNEA01000011 Alphaproteobacteria Paracoccus denitrificans [FNEA] 172558 172469 - Ser GCT [ENA] ¡û
>W1710540947 FNXG01000002 Alphaproteobacteria Paracoccus alkenifer [FNXG] 699013 698924 - Ser GCT [ENA] ¡û
>W1710547695 FODE01000020 Alphaproteobacteria Paracoccus alcaliphilus [FODE] 52413 52324 - Ser GCT [ENA] ¡û
>W1710555564 FOJO01000031 Alphaproteobacteria Paracoccus halophilus [FOJO] 1644 1555 - Ser GCT [ENA] ¡û
>W1710574687 FOYK01000011 Alphaproteobacteria Paracoccus denitrificans [FOYK] 172271 172182 - Ser GCT [ENA] ¡û
>W1710581781 FPKI01000039 Alphaproteobacteria Paracoccus pantotrophus [FPKI] 46917 47006 + Ser GCT [ENA] ¡û
>W1710592380 FRCK01000005 Alphaproteobacteria Paracoccus solventivorans [FRCK] 15848 15937 + Ser GCT [ENA] ¡û
>W1710596197 FTMK01000013 Alphaproteobacteria Paracoccus thiocyanatus [FTMK] 6996 6907 - Ser GCT [ENA] ¡û
Identical group No.50850 (22 seq.)
>W1712104553 NIPU01000016 Alphaproteobacteria Haematobacter massiliensis [NIPU] 10328 10239 - Ser GCT [ENA] ¡û
>W1712104610 NIPV01000122 Alphaproteobacteria Haematobacter missouriensis [NIPV] 6955 6866 - Ser GCT [ENA] ¡û
>W1712104640 NIPW01000027 Alphaproteobacteria Haematobacter genomosp. 1 [NIPW] 136922 137011 + Ser GCT [ENA] ¡û
>W1712104678 NIPX01000008 Alphaproteobacteria Haematobacter missouriensis [NIPX] 383 472 + Ser GCT [ENA] ¡û
>W1712104730 NIPY01000062 Alphaproteobacteria Haematobacter massiliensis [NIPY] 59900 59989 + Ser GCT [ENA] ¡û
>C171110771 CP020612 Alphaproteobacteria Paracoccus contaminans RKI 16-01929T [CP020612] 2584703 2584792 + Ser GCT - ¡û
>W141461736 JFGS01000118 Alphaproteobacteria Haematobacter missouriensis [JFGS] 391 477 + Ser GCT [ENA] ¡û
>PL191001305 CP035512 Alphaproteobacteria Haematobacter massiliensis OT1 plasmid:pOT1-2 (CP035512) 98863 98774 - Ser GCT [ENA] ¡û
>W141485047 JFZB01000033 Alphaproteobacteria Paenirhodobacter enshiensis [JFZB] 1875 1786 - Ser GCT [ENA] ¡û
>C181081655 CP023454 Alphaproteobacteria Rhodobacteraceae bacterium QY30 [CP023454] 2516913 2517002 + Ser GCT - ¡û
>C181194179 CP030918 Alphaproteobacteria Paracoccus suum SC2-6 [CP030918] 3107094 3107005 - Ser GCT - ¡û
>W141523479 JGYG01000006 Alphaproteobacteria Haematobacter massiliensis [JGYG] 55682 55593 - Ser GCT [ENA] ¡û
>W1910547070 FZNM01000004 Alphaproteobacteria Paracoccus sediminis DSM 26170 [FZNM] 245024 245113 + Ser GCT [ENA] ¡û
>W1911397920 NWMQ01000012 Alphaproteobacteria Paracoccus sp. SY [NWMQ] 24056 23967 - Ser GCT [ENA] ¡û
>W1810120359 PHSN01000026 Alphaproteobacteria Acidimangrovimonas sediminis MS2-2 [PHSN] 28540 28629 + Ser GCT [ENA] ¡û
>W1810195539 PKRQ01000001 Alphaproteobacteria Tabrizicola sp. TH137 [PKRQ] 109240 109151 - Ser GCT [ENA] ¡û
>W1810351384 PVEP01000013 Alphaproteobacteria Defluviimonas denitrificans DSM 18921 [PVEP] 74022 74111 + Ser GCT [ENA] ¡û
>W1511348648 JRKP01000029 Alphaproteobacteria Paracoccus sanguinis 39524 [JRKP] 3907 3996 + Ser GCT [ENA] ¡û
>W1511348684 JRKQ01000016 Alphaproteobacteria Paracoccus sanguinis 5503 [JRKQ] 2671 2760 + Ser GCT [ENA] ¡û
>W1511348761 JRKR01000193 Alphaproteobacteria Paracoccus sanguinis 10990 [JRKR] 3730 3819 + Ser GCT [ENA] ¡û
>W1511348810 JRKT01000001 Alphaproteobacteria Paracoccus sanguinis 4681 [JRKT] 3849 3938 + Ser GCT [ENA] ¡û
>W1710528208 FNNA01000001 Alphaproteobacteria Paracoccus sanguinis [FNNA] 27833 27744 - Ser GCT [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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