tRNA genes clustered and arranged according to each identical group

Alphaproteobacteria

Anticodon = GCT

HIT: 7 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.8306 (20 seq.)
>W131109472 APHV01000248 Alphaproteobacteria Azospirillum brasilense FP2 [APHV] 5092 5185 + Ser GCT [ENA]
>PL171000674 CP007794 Alphaproteobacteria Azospirillum brasilense Az39 plasmid:AbAZ39_p1 972119 972026 - Ser GCT [ENA]
>PL171000925 CP012915 Alphaproteobacteria Azospirillum brasilense Sp 7 plasmid:ABSP7_p1 1172397 1172304 - Ser GCT [ENA]
>PL171001760 HE577328 Alphaproteobacteria Azospirillum brasilense Sp245 sp245 plasmid:AZOBR_p1 1397194 1397287 + Ser GCT [ENA]
>WENV183727321 PJTO01027443 [PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment 66 159 + Ser GCT [ENA]
>PL191000305 CP022367 Alphaproteobacteria Azospirillum sp. TSH58 plasmid:TSH58_p02 (CP022367) 1691795 1691888 + Ser GCT [ENA]
>PL191000941 CP032322 Alphaproteobacteria Azospirillum brasilense MTCC4035 plasmid:p1 (CP032322) 160695 160788 + Ser GCT [ENA]
>PL191000993 CP032340 Alphaproteobacteria Azospirillum brasilense MTCC4038 plasmid:p1 (CP032340) 960009 960102 + Ser GCT [ENA]
>PL191001032 CP032346 Alphaproteobacteria Azospirillum brasilense MTCC4039 plasmid:p1 (CP032346) 151789 151882 + Ser GCT [ENA]
>W141520282 JGVN01000002 Alphaproteobacteria Azospirillum brasilense [JGVN] 1045950 1046043 + Ser GCT [ENA]
>W1910613056 LGQV01000085 Alphaproteobacteria Azospirillum sp. TSH58 (LGQV) 55350 55257 - Ser GCT [ENA]
>W1910613409 LGRK01000044 Alphaproteobacteria Azospirillum sp. Sp 7 (LGRK) 166002 166095 + Ser GCT [ENA]
>W1911138107 NOWT01000021 Alphaproteobacteria Azospirillum brasilense 2A1 (NOWT) 67694 67601 - Ser GCT [ENA]
>W1911768745 QXHE01000002 Alphaproteobacteria Azospirillum brasilense SR80 (QXHE) 113224 113317 + Ser GCT [ENA]
>W1810222253 POQV01000006 Alphaproteobacteria Azospirillum brasilense Ab-V5 (POQV) 70945 70852 - Ser GCT [ENA]
>W1810223537 POTD01000005 Alphaproteobacteria Azospirillum brasilense Ab-V6 (POTD) 70945 70852 - Ser GCT [ENA]
>W1810226077 POWG01000006 Alphaproteobacteria Azospirillum brasilense REC3 (POWG) 7605 7512 - Ser GCT [ENA]
>W1810692551 QLKQ01000006 Alphaproteobacteria Azospirillum brasilense HAMBI_3172 (QLKQ) 75436 75529 + Ser GCT [ENA]
>W1710626703 JPIR01000041 Alphaproteobacteria Azospirillum brasilense (JPIR) 7794 7701 - Ser GCT [ENA]
>W1710626752 JPIS01000022 Alphaproteobacteria Azospirillum brasilense (JPIS) 70639 70546 - Ser GCT [ENA]
Identical group No.13173 (17 seq.)
>PL171000027 AP010947 Alphaproteobacteria Azospirillum sp. B510 plasmid:pAB510a 355389 355481 + Ser GCT [ENA]
>PL171001714 FQ311869 Alphaproteobacteria Azospirillum lipoferum 4B plasmid:AZO_p1 291588 291680 + Ser GCT [ENA]
>WENV183734984 PJUA01000322 [PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment 11033 11125 + Ser GCT [ENA]
>WENV183736526 PJUC01008864 [PJUC] soil metagenome; Soil enriched on filter paper 685 593 - Ser GCT [ENA]
>PL191000749 CP029830 Alphaproteobacteria Azospirillum sp. M2T2B2 plasmid:unnamed1 (CP029830) 761023 761115 + Ser GCT [ENA]
>C191170733 CP039635 Alphaproteobacteria Azospirillum sp. TSH100 (CP039634, CP039635, CP039636, CP039637, CP039638, CP039639) 313581 313489 - Ser GCT -
>C191170789 CP039649 Alphaproteobacteria Azospirillum sp. TSA2s TSA2S (CP039642, CP039645, CP039646, CP039647, CP039648, CP039649, CP039650) 711957 711865 - Ser GCT -
>W1910612849 LGQS01000028 Alphaproteobacteria Azospirillum sp. TSA6c (LGQS) 3956460 3956552 + Ser GCT [ENA]
>W1910612940 LGQT01000060 Alphaproteobacteria Azospirillum sp. TSH7 (LGQT) 10986 11078 + Ser GCT [ENA]
>W1910613010 LGQU01000138 Alphaproteobacteria Azospirillum sp. TSH20 (LGQU) 10992 11084 + Ser GCT [ENA]
>W1910613109 LGQW01000015 Alphaproteobacteria Azospirillum sp. TSH64 (LGQW) 4082267 4082359 + Ser GCT [ENA]
>W1910613190 LGQX01000063 Alphaproteobacteria Azospirillum sp. TSH100 (LGQX) 10796 10888 + Ser GCT [ENA]
>W1910613232 LGQY01000063 Alphaproteobacteria Azospirillum sp. TSO5 (LGQY) 45171 45263 + Ser GCT [ENA]
>W1810058910 PDKW01000041 Alphaproteobacteria Azospirillum sp. B2 (PDKW) 277476 277568 + Ser GCT [ENA]
>W1511564944 LAEL01000004 Alphaproteobacteria Azospirillum thiophilum DSM 21654 [LAEL] 178396 178304 - Ser GCT [ENA]
>C161041931 CP012403 Alphaproteobacteria Azospirillum thiophilum BV-S 376745 376653 - Ser GCT -
>W1710607893 FXAK01000002 Alphaproteobacteria Azospirillum oryzae (FXAK) 466981 466889 - Ser GCT [ENA]
Identical group No.21761 (10 seq.)
>W1711434813 MINO01000013 Alphaproteobacteria Sphingobium phenoxybenzoativorans (MINO) 76351 76442 + Ser GCT [ENA]
>PL171001290 CP017076 Alphaproteobacteria Novosphingobium resinovorum SA1 plasmid:pSA1 749405 749496 + Ser GCT [ENA]
>W131160225 AQWK01000007 Alphaproteobacteria Novosphingobium nitrogenifigens DSM 19370 [AQWK] 33307 33216 - Ser GCT [ENA]
>W141484956 JFYZ01000023 Alphaproteobacteria Novosphingobium resinovorum [JFYZ] 90737 90828 + Ser GCT [ENA]
>W1910651516 LYMM01000050 Alphaproteobacteria Novosphingobium guangzhouense SA925 (LYMM) 24782 24691 - Ser GCT [ENA]
>W11151083 AEWJ01000051 Alphaproteobacteria Novosphingobium nitrogenifigens DSM 19370 [AEWJ] 165818 165909 + Ser GCT [ENA]
>W121081056 AKFJ01000008 Alphaproteobacteria Novosphingobium sp. Rr 2-17 [AKFJ] 102349 102440 + Ser GCT [ENA]
>W121119219 ALVC01000053 Alphaproteobacteria Sphingomonas sp. LH128 [ALVC] 20840 20931 + Ser GCT [ENA]
>W1610590954 LDRW01000001 Alphaproteobacteria Novosphingobium barchaimii (LDRW) 78254 78163 - Ser GCT [ENA]
>W1710710234 LDRW01000001 Alphaproteobacteria Novosphingobium barchaimii (LDRW) 78254 78163 - Ser GCT [ENA]
Identical group No.38043 (1 seq.)
>PL171001240 CP016463 Alphaproteobacteria Bosea sp. RAC05 plasmid:pBSY19_1 470268 470358 + Ser GCT [ENA]
Identical group No.46208 (28 seq.)
>W1711711770 MTBG01000001 Alphaproteobacteria Pseudoruegeria sp. SK021 (MTBG) 93081 92992 - Ser GCT [ENA]
>W1711798614 MWVJ01000133 Alphaproteobacteria Pseudophaeobacter leonis (MWVJ) 5513 5602 + Ser GCT [ENA]
>C171047872 CP016364 Alphaproteobacteria Phaeobacter sp. P97 (CP016364) 2955834 2955745 - Ser GCT -
>WENV180384748 OBOY01036711 [OBOY] marine metagenome; Sterile flask 201 290 + Ser GCT [ENA]
>W141082511 AUNB01000049 Alphaproteobacteria Thioclava sp. DT23-4 [AUNB] 7353 7442 + Ser GCT [ENA]
>W141151640 AXBF01000002 Alphaproteobacteria Pseudophaeobacter arcticus DSM 23566 [AXBF] 2934226 2934315 + Ser GCT [ENA]
>WENV182567063 OJEN01001089 [OJEN] seawater metagenome; Sea water 7318 7229 - Ser GCT [ENA]
>WENV182568068 OJEP01024489 [OJEP] seawater metagenome; Sea water 60 149 + Ser GCT [ENA]
>WENV182584837 OJHG01015346 [OJHG] seawater metagenome; Sea water 451 362 - Ser GCT [ENA]
>WENV182586903 OJHK01011447 [OJHK] seawater metagenome; Sea water 778 689 - Ser GCT [ENA]
>WENV170315376 CESO01115604 [CESO] marine metagenome genome assembly TARA_093_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4647 4736 + Ser GCT [ENA]
>WENV170385850 CETY01108057 [CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 167 256 + Ser GCT [ENA]
>WENV170584107 FUFK010192007 [FUFK] metagenome; unknown 275 364 + Ser GCT [ENA]
>WENV170672656 LAZR01000670 [LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment 3775 3864 + Ser GCT [ENA]
>WENV170705226 LLEQ01000480 [LLEQ] bioreactor metagenome; day86 25degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the 1706 1795 + Ser GCT [ENA]
>WENV170889117 MDTC01269847 [MDTC] marine metagenome; seawater 2240 2151 - Ser GCT [ENA]
>WENV170928287 MDTG01131298 [MDTG] marine metagenome; seawater 67 156 + Ser GCT [ENA]
>PL191001394 CP039965 Alphaproteobacteria Pseudorhodobacter sp. S12M18 plasmid:unnamed1 (CP039965) 781721 781810 + Ser GCT [ENA]
>C181123335 CP025804 Alphaproteobacteria Sulfitobacter sp. SK012 (CP025804) 1053455 1053544 + Ser GCT -
>W141531735 JHEH01000074 Alphaproteobacteria Thioclava dalianensis [JHEH] 4147 4236 + Ser GCT [ENA]
>W09112273 ABXS01000041 Alphaproteobacteria Roseobacter sp. GAI101 [ABXS] 82898 82809 - Ser GCT [ENA]
>W1910005003 AWWI01000060 Alphaproteobacteria Puniceibacterium antarcticum SM1211 (AWWI) 97472 97561 + Ser GCT [ENA]
>W1911696528 QMEJ01000006 Alphaproteobacteria Tropicimonas sp. IMCC34011 (QMEJ) 72891 72980 + Ser GCT [ENA]
>W1911696571 QMEK01000003 Alphaproteobacteria Tropicimonas sp. IMCC34043 (QMEK) 124611 124522 - Ser GCT [ENA]
>W1610092733 CYSA01000027 Alphaproteobacteria Thalassobius gelatinovorus (CYSA) 219078 219167 + Ser GCT [ENA]
>W1710095988 CYSA01000027 Alphaproteobacteria Thalassobius gelatinovorus (CYSA) 219078 219167 + Ser GCT [ENA]
>W1710551176 FOFW01000004 Alphaproteobacteria Thalassobius gelatinovorus (FOFW) 348041 348130 + Ser GCT [ENA]
>W1710570326 FOVB01000006 Alphaproteobacteria Thioclava dalianensis (FOVB) 87892 87803 - Ser GCT [ENA]
Identical group No.46257 (35 seq.)
>W1710853401 LLWQ01000104 Alphaproteobacteria Paracoccus sp. MKU1 (LLWQ) 2847 2936 + Ser GCT [ENA]
>W1710889748 LNBC01000014 Alphaproteobacteria Paracoccus aminovorans (LNBC) 124423 124334 - Ser GCT [ENA]
>W131158909 AQUO01000001 Alphaproteobacteria Paracoccus sp. N5 [AQUO] 1667176 1667087 - Ser GCT [ENA]
>C016006 CP000489 Alphaproteobacteria Paracoccus denitrificans PD1222 361057 361146 + Ser GCT [Ensembl]
>W141216647 AZVA01000039 Alphaproteobacteria Paracoccus sp. J55 [AZVA] 18448 18359 - Ser GCT [ENA]
>W141277370 JAEN01000018 Alphaproteobacteria Paracoccus sp. J39 [JAEN] 11780 11869 + Ser GCT [ENA]
>WENV170277954 CERQ01040533 [CERQ] marine metagenome genome assembly TARA_065_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 887 798 - Ser GCT [ENA]
>WENV170371066 CETR01234335 [CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 590 679 + Ser GCT [ENA]
>WENV170477869 CEVJ01165520 [CEVJ] marine metagenome genome assembly TARA_146_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 657 746 + Ser GCT [ENA]
>WENV170482678 CEVM01050922 [CEVM] marine metagenome genome assembly TARA_145_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 229 140 - Ser GCT [ENA]
>WENV170487700 CEVO01082894 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1070 1159 + Ser GCT [ENA]
>WENV170564874 CZPY01000014 [CZPY] metagenome; PAHs-polluted Soil 124423 124334 - Ser GCT [ENA]
>PL191000035 CP000489 Alphaproteobacteria Paracoccus denitrificans PD1222 plasmid:phage/plasmid primase, P4 family (CP000489) 361057 361146 + Ser GCT [Ensembl]
>W09103050 AAIT01000005 Alphaproteobacteria Paracoccus denitrificans PD1222 [AAIT] 305403 305314 - Ser GCT [ENA]
>C191134377 CP035090 Alphaproteobacteria Paracoccus denitrificans ATCC 19367 (CP035090, CP035091) 1955456 1955545 + Ser GCT -
>W1810235994 PPGA01000010 Alphaproteobacteria Paracoccus denitrificans ISTOD1 (PPGA) 54890 54801 - Ser GCT [ENA]
>W1810385282 PXNQ01000013 Alphaproteobacteria Methylarcula marina VKM B-2159 (PXNQ) 94994 94905 - Ser GCT [ENA]
>W1810585319 QFCQ01000049 Alphaproteobacteria Paracoccus thiocyanatus SST (QFCQ) 13237 13326 + Ser GCT [ENA]
>W1810697139 QLUV01000019 Alphaproteobacteria Paracoccus sp. SYSUP0003 (QLUV) 15864 15775 - Ser GCT [ENA]
>W1810762309 QPML01000011 Alphaproteobacteria Paracoccus versutus MAL 1HM19 (QPML) 43921 44010 + Ser GCT [ENA]
>W1810862245 QTUJ01000002 Alphaproteobacteria Paracoccus bengalensis DSM 17099 (QTUJ) 198806 198895 + Ser GCT [ENA]
>W1810884852 QUMX01000009 Alphaproteobacteria Paracoccus versutus DSM 582 (QUMX) 93655 93744 + Ser GCT [ENA]
>W1511348572 JRKN01000036 Alphaproteobacteria Paracoccus halophilus JCM 14014 [JRKN] 27128 27217 + Ser GCT [ENA]
>W1511348590 JRKO01000003 Alphaproteobacteria Paracoccus versutus DSM 582 [JRKO] 93836 93925 + Ser GCT [ENA]
>W1610716525 LLWQ01000104 Alphaproteobacteria Paracoccus sp. MKU1 (LLWQ) 2847 2936 + Ser GCT [ENA]
>W1610750126 LNBC01000014 Alphaproteobacteria Paracoccus aminovorans (LNBC) 124423 124334 - Ser GCT [ENA]
>W1710508109 FMVT01000018 Alphaproteobacteria Paracoccus tibetensis (FMVT) 727 638 - Ser GCT [ENA]
>W1710518466 FNEA01000011 Alphaproteobacteria Paracoccus denitrificans (FNEA) 172558 172469 - Ser GCT [ENA]
>W1710540947 FNXG01000002 Alphaproteobacteria Paracoccus alkenifer (FNXG) 699013 698924 - Ser GCT [ENA]
>W1710547695 FODE01000020 Alphaproteobacteria Paracoccus alcaliphilus (FODE) 52413 52324 - Ser GCT [ENA]
>W1710555564 FOJO01000031 Alphaproteobacteria Paracoccus halophilus (FOJO) 1644 1555 - Ser GCT [ENA]
>W1710574687 FOYK01000011 Alphaproteobacteria Paracoccus denitrificans (FOYK) 172271 172182 - Ser GCT [ENA]
>W1710581781 FPKI01000039 Alphaproteobacteria Paracoccus pantotrophus (FPKI) 46917 47006 + Ser GCT [ENA]
>W1710592380 FRCK01000005 Alphaproteobacteria Paracoccus solventivorans (FRCK) 15848 15937 + Ser GCT [ENA]
>W1710596197 FTMK01000013 Alphaproteobacteria Paracoccus thiocyanatus (FTMK) 6996 6907 - Ser GCT [ENA]
Identical group No.50850 (22 seq.)
>W1712104553 NIPU01000016 Alphaproteobacteria Haematobacter massiliensis (NIPU) 10328 10239 - Ser GCT [ENA]
>W1712104610 NIPV01000122 Alphaproteobacteria Haematobacter missouriensis (NIPV) 6955 6866 - Ser GCT [ENA]
>W1712104640 NIPW01000027 Alphaproteobacteria Haematobacter genomosp. 1 (NIPW) 136922 137011 + Ser GCT [ENA]
>W1712104678 NIPX01000008 Alphaproteobacteria Haematobacter missouriensis (NIPX) 383 472 + Ser GCT [ENA]
>W1712104730 NIPY01000062 Alphaproteobacteria Haematobacter massiliensis (NIPY) 59900 59989 + Ser GCT [ENA]
>C171110771 CP020612 Alphaproteobacteria Paracoccus contaminans RKI 16-01929T (CP020612) 2584703 2584792 + Ser GCT -
>W141461736 JFGS01000118 Alphaproteobacteria Haematobacter missouriensis [JFGS] 391 477 + Ser GCT [ENA]
>PL191001305 CP035512 Alphaproteobacteria Haematobacter massiliensis OT1 plasmid:pOT1-2 (CP035512) 98863 98774 - Ser GCT [ENA]
>W141485047 JFZB01000033 Alphaproteobacteria Paenirhodobacter enshiensis [JFZB] 1875 1786 - Ser GCT [ENA]
>C181081655 CP023454 Alphaproteobacteria Rhodobacteraceae bacterium QY30 (CP023454) 2516913 2517002 + Ser GCT -
>C181194179 CP030918 Alphaproteobacteria Paracoccus sp. SC2-6 (CP030918) 3107094 3107005 - Ser GCT -
>W141523479 JGYG01000006 Alphaproteobacteria Haematobacter massiliensis [JGYG] 55682 55593 - Ser GCT [ENA]
>W1910547070 FZNM01000004 Alphaproteobacteria Paracoccus sediminis DSM 26170 (FZNM) 245024 245113 + Ser GCT [ENA]
>W1911397920 NWMQ01000012 Alphaproteobacteria Paracoccus sp. SY (NWMQ) 24056 23967 - Ser GCT [ENA]
>W1810120359 PHSN01000026 Alphaproteobacteria Defluviimonas sp. MS2-2 (PHSN) 28540 28629 + Ser GCT [ENA]
>W1810195539 PKRQ01000001 Alphaproteobacteria Tabrizicola sp. TH137 (PKRQ) 109240 109151 - Ser GCT [ENA]
>W1810351384 PVEP01000013 Alphaproteobacteria Defluviimonas denitrificans DSM 18921 (PVEP) 74022 74111 + Ser GCT [ENA]
>W1511348648 JRKP01000029 Alphaproteobacteria Paracoccus sanguinis 39524 [JRKP] 3907 3996 + Ser GCT [ENA]
>W1511348684 JRKQ01000016 Alphaproteobacteria Paracoccus sp. 5503 [JRKQ] 2671 2760 + Ser GCT [ENA]
>W1511348761 JRKR01000193 Alphaproteobacteria Paracoccus sanguinis 10990 [JRKR] 3730 3819 + Ser GCT [ENA]
>W1511348810 JRKT01000001 Alphaproteobacteria Paracoccus sp. 4681 [JRKT] 3849 3938 + Ser GCT [ENA]
>W1710528208 FNNA01000001 Alphaproteobacteria Paracoccus sanguinis (FNNA) 27833 27744 - Ser GCT [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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