tRNA genes clustered and arranged according to each identical group

Alphaproteobacteria

Anticodon = TCA

HIT: 7 Group(s).

Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.140 (1 seq.)
>PL191001475	CP040764	Alphaproteobacteria	Paracoccus sp. 2251 plasmid:unnamed3 (CP040764)	47940	48036	+	Sec	TCA	[ENA]	○
Identical group No.3680 (15 seq.)
>W1710853399	LLWQ01000093	Alphaproteobacteria	Paracoccus sp. MKU1 [LLWQ]	3007	2912	-	SeC(p)	TCA	[ENA]	○
>C016024	CP000489	Alphaproteobacteria	Paracoccus denitrificans PD1222 [CP000489, CP000490]	2841628	2841537	-	SeC	TCA	[Ensembl]	○
>W141216614	AZVA01000002	Alphaproteobacteria	Paracoccus sp. J55 [AZVA]	300079	299985	-	SeC(p)	TCA	[ENA]	○
>W141277345	JAEN01000003	Alphaproteobacteria	Paracoccus sp. J39 [JAEN]	226765	226671	-	SeC(p)	TCA	[ENA]	○
>PL191000053	CP000489	Alphaproteobacteria	Paracoccus denitrificans PD1222 plasmid:phage/plasmid primase, P4 family (CP000489)	2841628	2841533	-	Sec	TCA	[Ensembl]	○
>C181203385	LN832559	Alphaproteobacteria	Paracoccus aminovorans [LN832559]	224626	224721	+	SeC	TCA	-	○
>C191134390	CP035090	Alphaproteobacteria	Paracoccus denitrificans ATCC 19367 [CP035090, CP035091]	1583762	1583667	-	Sec	TCA	-	○
>W09103057	AAIT01000006	Alphaproteobacteria	Paracoccus denitrificans PD1222 [AAIT]	189241	189146	-	SeC	TCA	[ENA]	○
>W1810235992	PPGA01000008	Alphaproteobacteria	Paracoccus denitrificans ISTOD1 [PPGA]	121564	121469	-	Sec	TCA	[ENA]	○
>W1610049851	BBFH01001079	Alphaproteobacteria	Paracoccus denitrificans JCM 21484 [BBFH]	398	493	+	SeC(p)	TCA	[ENA]	○
>W1610716523	LLWQ01000093	Alphaproteobacteria	Paracoccus sp. MKU1 [LLWQ]	3007	2912	-	SeC(p)	TCA	[ENA]	○
>W1710046250	BBFH01001079	Alphaproteobacteria	Paracoccus denitrificans JCM 21484 [BBFH]	398	493	+	SeC(p)	TCA	[ENA]	○
>W1710518463	FNEA01000008	Alphaproteobacteria	Paracoccus denitrificans [FNEA]	121805	121710	-	SeC(p)	TCA	[ENA]	○
>W1710563590	FOPU01000021	Alphaproteobacteria	Paracoccus aminovorans [FOPU]	63601	63696	+	SeC(p)	TCA	[ENA]	○
>W1710574684	FOYK01000008	Alphaproteobacteria	Paracoccus denitrificans [FOYK]	121805	121710	-	SeC(p)	TCA	[ENA]	○
Identical group No.3693 (52 seq.)
>PL171000341	CP001831	Alphaproteobacteria	Sinorhizobium meliloti SM11 plasmid:pSmeSM11c	1617547	1617452	-	SeC(p)	TCA	[ENA]	○
>PL171000461	CP002741	Alphaproteobacteria	Sinorhizobium meliloti BL225C plasmid:pSINMEB01	334841	334936	+	SeC(p)	TCA	[ENA]	○
>PL171000609	CP003936	Alphaproteobacteria	Sinorhizobium meliloti GR4 plasmid:pRmeGR4c	1402583	1402488	-	SeC(p)	TCA	[ENA]	○
>PL171000702	CP009145	Alphaproteobacteria	Sinorhizobium meliloti RMO17 plasmid:pSymA	1451107	1451012	-	SeC(p)	TCA	[ENA]	○
>PL171001393	CP019483	Alphaproteobacteria	Sinorhizobium meliloti B401 plasmid:pSymA	53100	53195	+	SeC(p)	TCA	[ENA]	○
>PL171001395	CP019486	Alphaproteobacteria	Sinorhizobium meliloti B399 plasmid:pSymA	15054	15149	+	SeC(p)	TCA	[ENA]	○
>PL171001397	CP019585	Alphaproteobacteria	Sinorhizobium meliloti plasmid:pSymA	14645	14740	+	SeC(p)	TCA	[ENA]	○
>PL171001482	CP021217	Alphaproteobacteria	Sinorhizobium meliloti RU11/001 plasmid:pSymA	1301113	1301208	+	SeC(p)	TCA	[ENA]	○
>PL171001501	CP021794	Alphaproteobacteria	Sinorhizobium meliloti USDA1157 plasmid:psymA	607452	607357	-	SeC(p)	TCA	[ENA]	○
>PL171001505	CP021801	Alphaproteobacteria	Sinorhizobium meliloti USDA1021 plasmid:psymA	1366453	1366358	-	SeC(p)	TCA	[ENA]	○
>PL171001511	CP021805	Alphaproteobacteria	Sinorhizobium meliloti T073 plasmid:psymA	376768	376863	+	SeC(p)	TCA	[ENA]	○
>PL171001513	CP021809	Alphaproteobacteria	Sinorhizobium meliloti Rm41 plasmid:psymA	643312	643407	+	SeC(p)	TCA	[ENA]	○
>PL171001515	CP021813	Alphaproteobacteria	Sinorhizobium meliloti M270 plasmid:psymA	501292	501387	+	SeC(p)	TCA	[ENA]	○
>PL171001518	CP021821	Alphaproteobacteria	Sinorhizobium meliloti M162 plasmid:accessoryA	160366	160461	+	SeC(p)	TCA	[ENA]	○
>PL171001520	CP021824	Alphaproteobacteria	Sinorhizobium meliloti KH46 plasmid:psymA	1457490	1457395	-	SeC(p)	TCA	[ENA]	○
>PL171001521	CP021827	Alphaproteobacteria	Sinorhizobium meliloti KH35c plasmid:psymA	170298	170203	-	SeC(p)	TCA	[ENA]	○
>PL171001523	CP021830	Alphaproteobacteria	Sinorhizobium meliloti HM006 plasmid:psymA	1067706	1067611	-	SeC(p)	TCA	[ENA]	○
>PL171001781	HE995407	Alphaproteobacteria	Sinorhizobium meliloti Rm41 plasmid:pSYMA	1543894	1543799	-	SeC(p)	TCA	[ENA]	○
>W131213936	ATTK01000024	Alphaproteobacteria	Sinorhizobium meliloti MVII-I [ATTK]	42292	42197	-	SeC(p)	TCA	[ENA]	○
>W131219117	ATYH01000007	Alphaproteobacteria	Sinorhizobium meliloti CIAM1775 [ATYH]	88191	88286	+	SeC(p)	TCA	[ENA]	○
>W131220100	ATZC01000015	Alphaproteobacteria	Sinorhizobium meliloti GVPV12 [ATZC]	86947	87042	+	SeC(p)	TCA	[ENA]	○
>W131220139	ATZD01000006	Alphaproteobacteria	Sinorhizobium meliloti Mlalz-1 [ATZD]	169961	170056	+	SeC(p)	TCA	[ENA]	○
>W141152008	AXBL01000040	Alphaproteobacteria	Sinorhizobium meliloti BO21CC [AXBL]	193702	193797	+	SeC(p)	TCA	[ENA]	○
>W141152019	AXBM01000056	Alphaproteobacteria	Sinorhizobium meliloti AK58 [AXBM]	46710	46615	-	SeC(p)	TCA	[ENA]	○
>W141207535	AZNW01000015	Alphaproteobacteria	Sinorhizobium meliloti WSM1022 [AZNW]	60598	60503	-	SeC(p)	TCA	[ENA]	○
>W141255010	CBTS010000116	Alphaproteobacteria	Sinorhizobium meliloti RU11/001 [CBTS]	22040	21945	-	SeC(p)	TCA	[ENA]	○
>W1910005763	AYSQ01000128	Alphaproteobacteria	Sinorhizobium meliloti CCBAU 01290 [AYSQ]	26844	26749	-	Sec	TCA	[ENA]	○
>W1910183024	BJNJ01000037	Alphaproteobacteria	Sinorhizobium meliloti NBRC 14782 [BJNJ]	69701	69796	+	Sec	TCA	[ENA]	○
>W1911412954	NWVT01000038	Alphaproteobacteria	Ensifer sp. T2_8 [NWVT]	34304	34399	+	Sec	TCA	[ENA]	○
>W1810357263	PVNM01000307	Alphaproteobacteria	Sinorhizobium meliloti BM806 [PVNM]	88227	88322	+	Sec	TCA	[ENA]	○
>W1810448723	PZMI01000025	Alphaproteobacteria	Sinorhizobium meliloti AK555 [PZMI]	166914	167009	+	Sec	TCA	[ENA]	○
>W1810448736	PZMJ01000014	Alphaproteobacteria	Sinorhizobium meliloti CXM1-105 [PZMJ]	249415	249510	+	Sec	TCA	[ENA]	○
>W10126517	AEDG01000003	Alphaproteobacteria	Sinorhizobium meliloti BL225C [AEDG]	218008	217913	-	SeC	TCA	[ENA]	○
>W10126597	AEDH01000023	Alphaproteobacteria	Sinorhizobium meliloti AK83 [AEDH]	354	259	-	SeC	TCA	[ENA]	○
>C11120816	CP002783	Alphaproteobacteria	Sinorhizobium meliloti AK83 [CP002781, CP002782, CP002783]	210058	209963	-	SeC	TCA	[Ensembl]	○
>W11133778	AEDG01000003	Alphaproteobacteria	Sinorhizobium meliloti BL225C [AEDG]	218008	217913	-	SeC(p)	TCA	[ENA]	○
>W11133858	AEDH01000023	Alphaproteobacteria	Sinorhizobium meliloti AK83 [AEDH]	354	259	-	SeC(p)	TCA	[ENA]	○
>W1511555780	JZXD01000053	Alphaproteobacteria	Sinorhizobium meliloti L5-30 [JZXD]	30609	30514	-	SeC	TCA	[ENA]	○
>W121021500	AGVV01000001	Alphaproteobacteria	Sinorhizobium meliloti CCNWSX0020 [AGVV]	118450	118355	-	SeC	TCA	[ENA]	○
>W121103587	AKZR01000209	Alphaproteobacteria	Sinorhizobium meliloti H1 [AKZR]	43767	43672	-	SeC	TCA	[ENA]	○
>W121103610	AKZS01000084	Alphaproteobacteria	Sinorhizobium meliloti C0438LL [AKZS]	69706	69801	+	SeC	TCA	[ENA]	○
>W121103663	AKZT01000085	Alphaproteobacteria	Sinorhizobium meliloti C0431A [AKZT]	36527	36622	+	SeC	TCA	[ENA]	○
>W121103745	AKZU01000601	Alphaproteobacteria	Sinorhizobium meliloti AK75 [AKZU]	1661	1756	+	SeC	TCA	[ENA]	○
>W121103782	AKZV01000343	Alphaproteobacteria	Sinorhizobium meliloti AK11 [AKZV]	32688	32593	-	SeC	TCA	[ENA]	○
>W121103818	AKZW01000071	Alphaproteobacteria	Sinorhizobium meliloti AE608H [AKZW]	111653	111748	+	SeC	TCA	[ENA]	○
>W121103892	AKZX01000414	Alphaproteobacteria	Sinorhizobium meliloti A0643DD [AKZX]	1935	1840	-	SeC	TCA	[ENA]	○
>W121103918	AKZY01000073	Alphaproteobacteria	Sinorhizobium meliloti A0641M [AKZY]	70433	70528	+	SeC	TCA	[ENA]	○
>W121104024	AKZZ01000106	Alphaproteobacteria	Sinorhizobium meliloti 5A14 [AKZZ]	61280	61375	+	SeC	TCA	[ENA]	○
>W121104042	AKZZ01000161	Alphaproteobacteria	Sinorhizobium meliloti 5A14 [AKZZ]	42089	41994	-	SeC	TCA	[ENA]	○
>W121104090	ALAA01000209	Alphaproteobacteria	Sinorhizobium meliloti 1A42 [ALAA]	35229	35324	+	SeC	TCA	[ENA]	○
>W1710530180	FNOO01000003	Alphaproteobacteria	Sinorhizobium meliloti [FNOO]	121707	121802	+	SeC(p)	TCA	[ENA]	○
>W1710541813	FNYP01000027	Alphaproteobacteria	Sinorhizobium meliloti [FNYP]	679	584	-	SeC(p)	TCA	[ENA]	○
Identical group No.5091 (4 seq.)
>PL171000001	AE006469	Alphaproteobacteria	Sinorhizobium meliloti 1021 plasmid:pSymA	15716	15811	+	SeC(p)	TCA	[ENA]	○
>PL171000615	CP004138	Alphaproteobacteria	Sinorhizobium meliloti 2011 plasmid:pSymA	15716	15811	+	SeC(p)	TCA	[ENA]	○
>PL171001503	CP021798	Alphaproteobacteria	Sinorhizobium meliloti USDA1106 plasmid:psymA	708322	708227	-	SeC(p)	TCA	[ENA]	○
>W131219440	ATYP01000005	Alphaproteobacteria	Sinorhizobium meliloti RRl128 [ATYP]	181953	181858	-	SeC(p)	TCA	[ENA]	○
Identical group No.5760 (26 seq.)
>W1710862255	LMEG01000002	Alphaproteobacteria	Ensifer sp. Root423 [LMEG]	263874	263970	+	SeC(p)	TCA	[ENA]	○
>W1710862621	LMEN01000005	Alphaproteobacteria	Ensifer sp. Root1298 [LMEN]	19655	19751	+	SeC(p)	TCA	[ENA]	○
>W1710862925	LMES01000004	Alphaproteobacteria	Ensifer sp. Root1312 [LMES]	19656	19752	+	SeC(p)	TCA	[ENA]	○
>W1710864706	LMGC01000004	Alphaproteobacteria	Ensifer sp. Root558 [LMGC]	164918	165014	+	SeC(p)	TCA	[ENA]	○
>W1710867489	LMII01000003	Alphaproteobacteria	Ensifer sp. Root74 [LMII]	19692	19788	+	SeC(p)	TCA	[ENA]	○
>W1710868899	LMJM01000001	Alphaproteobacteria	Ensifer sp. Root954 [LMJM]	541394	541298	-	SeC(p)	TCA	[ENA]	○
>W1711679647	MRVD01000015	Alphaproteobacteria	Ensifer adhaerens [MRVD]	89920	90016	+	SeC(p)	TCA	[ENA]	○
>PL171001180	CP015881	Alphaproteobacteria	Ensifer adhaerens Casida A plasmid:pCasidaAA	106704	106608	-	SeC(p)	TCA	[ENA]	○
>W141187435	AYLZ02000004	Alphaproteobacteria	Shinella sp. DD12 [AYLZ]	109356	109260	-	SeC(p)	TCA	[ENA]	○
>W1910891700	NEXT01000001	Alphaproteobacteria	Sinorhizobium sp. LM21 [NEXT]	532798	532702	-	Sec	TCA	[ENA]	○
>W1911614509	POVM01000016	Alphaproteobacteria	Sinorhizobium meliloti 320 [POVM]	176659	176563	-	Sec	TCA	[ENA]	○
>W1810197037	PNFP01000016	Alphaproteobacteria	Ensifer adhaerens ST2 [PNFP]	18405	18501	+	Sec	TCA	[ENA]	○
>W1810671979	QJTB01000003	Alphaproteobacteria	Ensifer adhaerens WJB133 25_10 [QJTB]	305616	305712	+	Sec	TCA	[ENA]	○
>W1810696400	QLTH01000005	Alphaproteobacteria	Ensifer adhaerens AG1206 [QLTH]	146214	146310	+	Sec	TCA	[ENA]	○
>W1511403334	JTLA01000116	Alphaproteobacteria	Ensifer sp. ZNC0028 [JTLA]	32628	32532	-	SeC	TCA	[ENA]	○
>W1610024780	AUTB01000103	Alphaproteobacteria	Sinorhizobium sp. GL2 [AUTB]	57122	57026	-	SeC(p)	TCA	[ENA]	○
>W1610724601	LMEG01000002	Alphaproteobacteria	Ensifer sp. Root423 [LMEG]	263874	263970	+	SeC(p)	TCA	[ENA]	○
>W1610724967	LMEN01000005	Alphaproteobacteria	Ensifer sp. Root1298 [LMEN]	19655	19751	+	SeC(p)	TCA	[ENA]	○
>W1610725271	LMES01000004	Alphaproteobacteria	Ensifer sp. Root1312 [LMES]	19656	19752	+	SeC(p)	TCA	[ENA]	○
>W1610727052	LMGC01000004	Alphaproteobacteria	Ensifer sp. Root558 [LMGC]	164918	165014	+	SeC(p)	TCA	[ENA]	○
>W1610729835	LMII01000003	Alphaproteobacteria	Ensifer sp. Root74 [LMII]	19692	19788	+	SeC(p)	TCA	[ENA]	○
>W1610731245	LMJM01000001	Alphaproteobacteria	Ensifer sp. Root954 [LMJM]	541394	541298	-	SeC(p)	TCA	[ENA]	○
>W1710021221	AUTB01000103	Alphaproteobacteria	Sinorhizobium sp. GL2 [AUTB]	57122	57026	-	SeC(p)	TCA	[ENA]	○
>W1710521816	FNGR01000010	Alphaproteobacteria	Ensifer sp. YR511 [FNGR]	166647	166743	+	SeC(p)	TCA	[ENA]	○
>W1710561950	FOON01000003	Alphaproteobacteria	Ensifer sp. OV372 [FOON]	567658	567562	-	SeC(p)	TCA	[ENA]	○
>W1710698075	LAZS01000008	Alphaproteobacteria	Ensifer adhaerens [LAZS]	523388	523292	-	SeC(p)	TCA	[ENA]	○
Identical group No.6160 (3 seq.)
>PL191001286	CP034811	Alphaproteobacteria	Paracoccus sp. Arc7-R13 plasmid:unnamed1 (CP034811)	98028	98124	+	Sec	TCA	[ENA]	○
>W1511518703	JXYF01000035	Alphaproteobacteria	Paracoccus sp. S4493 [JXYF]	23690	23594	-	SeC	TCA	[ENA]	○
>W1511526796	JYGY01000002	Alphaproteobacteria	Paracoccus sp. 228 361 [JYGY]	111776	111680	-	SeC	TCA	[ENA]	○
Identical group No.15782 (1 seq.)
>PL191000803	CP030127	Alphaproteobacteria	Indioceanicola profundi SCSIO 08040 plasmid:unnamed1 (CP030127)	318269	318361	+	Sec	TCA	[ENA]	○